prot_H-paniculata_contig1438.2631.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1438.2631.1
Unique Nameprot_H-paniculata_contig1438.2631.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length276
Homology
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BLAST of mRNA_H-paniculata_contig1438.2631.1 vs. uniprot
Match: A0A6H5KY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY55_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 1.110e-96
Identity = 161/274 (58.76%), Postives = 202/274 (73.72%), Query Frame = 0 
Query:    1 VNSYVKFAEEAIDGLCSPDVDTAKAYAILSMVYAWLDNKKLYAKNLKAAQKLVQIMEENGEELPLDLMDMMKEQERVLYLHYTEDFDLIRECIDDTPSKPPDMDPITACETGLFHMVRFYSDGVFKAFWRDVLAHDALLTETKIFAEKYLKDCMVIEKIAETRPGLKDTAGALYIRSAMQFVRLPLKTDPAESLKSTIELCRVIAQVPGMVRFGPVKHYVHCLLMGLARPAMAAQDKGAYEKLRSLYNGLDIKGELVPPPEEMDIAKLCRQPFC 274
            V  YVK AEEAIDGLC+ DV TAKAY I+SMVYAW DN  L+AK L  AQ+LV  M+ + EE+P+   D+MKE ERV  LHYTED D+I +C  +   +PP M      + GLFHMVR+Y++GVFKAFWRD+   ++ L ET  FA+K+  +C  IE+IA +R  LK++AG LYIR+AMQF+RLPLKT+PAE+LKSTI L  +I QVPGMVR+GP+KHYVHCL+M L RPA+   DKG+YEKLR LYN LDI G  +   E+MD+A LC+  FC
Sbjct:  283 VRRYVKLAEEAIDGLCTEDVPTAKAYTIMSMVYAWQDNVALFAKYLGRAQELVDSMDAS-EEIPM-ASDIMKELERVRVLHYTEDEDVINKCCYEADGEPPTMTLAMMSDAGLFHMVRYYTNGVFKAFWRDLHKSNSDLPETTRFADKHRHECSAIEEIANSRERLKNSAGGLYIRAAMQFMRLPLKTNPAEALKSTIVLTDIICQVPGMVRYGPLKHYVHCLVMMLKRPAILGGDKGSYEKLRKLYNVLDIAGPDIEAAEDMDMAMLCKHQFC 554
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BLAST of mRNA_H-paniculata_contig1438.2631.1 vs. uniprot
Match: D8LBT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT4_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 7.380e-93
Identity = 151/274 (55.11%), Postives = 193/274 (70.44%), Query Frame = 0 
Query:    1 VNSYVKFAEEAIDGLCSPDVDTAKAYAILSMVYAWLDNKKLYAKNLKAAQKLVQIMEENGEELPLDLMDMMKEQERVLYLHYTEDFDLIRECIDDTPSKPPDMDPITACETGLFHMVRFYSDGVFKAFWRDVLAHDALLTETKIFAEKYLKDCMVIEKIAETRPGLKDTAGALYIRSAMQFVRLPLKTDPAESLKSTIELCRVIAQVPGMVRFGPVKHYVHCLLMGLARPAMAAQDKGAYEKLRSLYNGLDIKGELVPPPEEMDIAKLCRQPFC 274
            V  Y+K AEEA+DGLC+ DV TAKAY I++MVYAW DN  L+A+ L  AQKLV  ++ + EE+P++L D+MKE ERV  LHYTED D+I +C  +   +PP M      + GLFHMVR+Y++GVFKAFWRD+   ++ L  T                   TR GLK++AGALYIR+AMQF+RLPLKTDP E+LKST+ L ++I QVPGMVR+GP+KHYVHCL+M L RPA+   DKG+YEKLR LYN LDI G  +   E+MD+A LC+  FC
Sbjct:  171 VRRYIKLAEEAVDGLCTEDVPTAKAYTIMAMVYAWQDNSALFAEYLGRAQKLVDSLDAS-EEIPMELTDIMKELERVRVLHYTEDEDVIHKCCYEADGEPPTMTLAMLSDAGLFHMVRYYTNGVFKAFWRDLHEVNSDLPAT-------------------TREGLKNSAGALYIRAAMQFMRLPLKTDPVEALKSTVVLTKIICQVPGMVRYGPLKHYVHCLVMMLKRPAILGVDKGSYEKLRKLYNSLDIAGPNIEAAEDMDMAMLCKHQFC 424
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1438.2631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY55_9PHAE1.110e-9658.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBT4_ECTSI7.380e-9355.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1438contigH-paniculata_contig1438:411..4774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1438.2631.1mRNA_H-paniculata_contig1438.2631.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1438 411..4774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1438.2631.1 ID=prot_H-paniculata_contig1438.2631.1|Name=mRNA_H-paniculata_contig1438.2631.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp
VNSYVKFAEEAIDGLCSPDVDTAKAYAILSMVYAWLDNKKLYAKNLKAAQ
KLVQIMEENGEELPLDLMDMMKEQERVLYLHYTEDFDLIRECIDDTPSKP
PDMDPITACETGLFHMVRFYSDGVFKAFWRDVLAHDALLTETKIFAEKYL
KDCMVIEKIAETRPGLKDTAGALYIRSAMQFVRLPLKTDPAESLKSTIEL
CRVIAQVPGMVRFGPVKHYVHCLLMGLARPAMAAQDKGAYEKLRSLYNGL
DIKGELVPPPEEMDIAKLCRQPFCR*
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