mRNA_H-paniculata_contig14320.2612.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig14320	contig	H-paniculata_contig14320:4135..6570 -

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig14320.2612.1	prot_H-paniculata_contig14320.2612.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig14320 4135..6570 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929140.5710566-CDS-H-paniculata_contig14320:4134..4685	1622929140.5710566-CDS-H-paniculata_contig14320:4134..4685	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 4135..4685 -
1691480747.04475-CDS-H-paniculata_contig14320:4134..4685	1691480747.04475-CDS-H-paniculata_contig14320:4134..4685	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 4135..4685 -
1622929140.589128-CDS-H-paniculata_contig14320:5072..5280	1622929140.589128-CDS-H-paniculata_contig14320:5072..5280	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 5073..5280 -
1691480747.0618649-CDS-H-paniculata_contig14320:5072..5280	1691480747.0618649-CDS-H-paniculata_contig14320:5072..5280	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 5073..5280 -
1622929140.6026273-CDS-H-paniculata_contig14320:5687..6152	1622929140.6026273-CDS-H-paniculata_contig14320:5687..6152	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 5688..6152 -
1691480747.071251-CDS-H-paniculata_contig14320:5687..6152	1691480747.071251-CDS-H-paniculata_contig14320:5687..6152	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 5688..6152 -
1622929140.6181524-CDS-H-paniculata_contig14320:6444..6570	1622929140.6181524-CDS-H-paniculata_contig14320:6444..6570	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 6445..6570 -
1691480747.0799973-CDS-H-paniculata_contig14320:6444..6570	1691480747.0799973-CDS-H-paniculata_contig14320:6444..6570	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig14320 6445..6570 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig14320:4135..6570-
coding sequence from alignment at H-paniculata_contig14320:4135..6570-

protein sequence of mRNA_H-paniculata_contig14320.2612.1

>prot_H-paniculata_contig14320.2612.1 ID=prot_H-paniculata_contig14320.2612.1|Name=mRNA_H-paniculata_contig14320.2612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=450bp
GSVTSSGSGKYVGIGGGSEERTRSRRKSVGALQGFGSLITRRVSRGSNAS
SHSDFSDSGGRKASGGVGELSTKAVDRLRKTNTVPGGLSSSSMAIMGGGG
LGGLGSPAAIGGHRKRESWGMTAAEKAAVQTLEIRRPDDLPHSNKAWKVL
GRSPPPPGAVGSGGGSLAIGRGRSKKASSLSSKNLGTRSSSVPLGPQVTH
GSAHQLKLPSEPPSSTSLSLQGFHHPVGSWSAFSAVTATPSVDSTGETPS
SSRDIGGGRGGGGGAAGGPRDNHLRQQQYGTHRYANSTTTHPDIIHNNAT
HDLVFSPPISMAAADRAPAHGSAGGITLATSGWSTDEEDFVMMGAATPPP
PPPPPPPPPPPPLGLGLSRRQDSDLGGSGSGSMGMFAAEIEVRVGRPPLD
RQDSTAAAAAAARAEQTRRVAVAEADYKEAAHRHAMEDPTYRGIRGAPRG

mRNA from alignment at H-paniculata_contig14320:4135..6570-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig14320.2612.1 ID=mRNA_H-paniculata_contig14320.2612.1|Name=mRNA_H-paniculata_contig14320.2612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2436bp|location=Sequence derived from alignment at H-paniculata_contig14320:4135..6570- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCAGCGTAACAAGCAGCGGGTCAGGGAAATATGTTGGTATCGGAGGCGG
CAGCGAGGAAAGAACGAGGTCTCGAAGAAAATCCGTGGGGGCGCTGCAAG
GGTTCGGCAGCTTAATAACTCGCAGGGTGATGGAAGCAAAAAAGCGAACG
AAAAACTCGATACAATAGTCACGTAGAGGTGGGGGGGGAGTAAGGAATGT
AAGAAATAAGTAGCATGTGAAAAGTATTTTTGATTTTGATTTTGCATCCA
TCGTCAAAATCGGATGTGTTTTTCAAAGGGTCTATTCCTATTGAAAAATA
GTCATTCGTATTGTTTCTTAAACGCCTGTTTTTGTGTACCATAGTTTTCT
ATGTGGACGGAGGCTTTTAATATATATATATATATTTTTTTTGCTCTCCC
TCTCAATCTCACTAACAGGTCTCGCGCGGATCGAACGCTTCCTCCCACAG
CGACTTCTCAGACTCGGGGGGCAGAAAGGCCAGCGGGGGCGTGGGCGAAC
TATCCACAAAAGCCGTAGACCGCCTGAGGAAGACAAACACAGTGCCCGGA
GGCCTGAGCTCATCCAGCATGGCCATCATGGGCGGCGGCGGGCTGGGGGG
GCTAGGCTCTCCCGCCGCCATCGGCGGACATCGAAAGCGAGAAAGTTGGG
GTATGACTGCCGCTGAAAAGGCTGCTGTGCAGACGCTGGAGATCAGGAGG
CCGGATGATTTGCCCCACAGCAATAAAGCGTGGAAGGTCCTTGGACGGTC
GCCGCCCCCGCCAGGAGCGGTGGGGAGCGGCGGTGGGTCATTGGCCATTG
GGCGGGGGAGGTCGAAAAAGGCTTCTTCGTTGTCGTCGAAGAATTTGGGG
ACGCGATCGAGCTCGGTTCCTTTGGGACCGCAGGTAGAGAGACAAAGTTT
TACTTAATTATGTGATATAATAAGCGCCATTCTTAACCCGTTTGAGGTTC
AATGTTTTTCAAAACCCCTTCGTGTCACGTGCACGAGTCGACCATAGTTC
TCTTGAGCCAAAGATTATTATGCTGACGAGTGAACCACTGCTCTTTTCAA
AGGGGAGTAAATCGGCCCTAGATAATCGCACCTGTAGTCATTTTCCAGCA
TATGTACAAGGCCATACTGCATAAAAAAAATATTACCCCGAAAACGGATT
CCAGGAACAGATTTCCGAGGTGTGAGTTGTGAAACTGTCGTCTAAATTTC
TTAAGCTCGTGGATAAGTAATCCAGTCCCTCCCTCCCCCCAGCCATTTAC
ATACCCTGTACTTCCCACACCCCTCCCAACTTGATGACAGGTAACACATG
GGAGCGCCCACCAGCTCAAGCTACCCTCGGAGCCACCCTCCTCGACGTCG
TTGTCGTTGCAAGGTTTTCACCACCCTGTCGGATCATGGTCTGCCTTCAG
CGCGGTGACCGCCACGCCGTCCGTCGACAGCACGGGTGAGACACCATCGT
CATCGAGAGATATCGGCGGAGGCAGAGGCGGAGGCGGAGGCGCAGCAGGT
GCTAGGAGTAGGGGTCGGGGTGGGGAGAGATGGGGAGGTGGCGGAGGCGT
TGTGGGTCATTTAGAAGAAAAAGTAAAACTCACTTGGTATTACTGTAGTT
ACTGAATTTGTTGTTATTCACGACACACCGATGTATGTATGATCGCGCAT
GATGACGAGTTTGAATGTGGCTTGTAATGCAATCGCGGATGTTGTAGGGA
GTTGAACACCGGAAGTTCGCGGAGATTGGCGAGGTAAGGAATCCACTGAG
TGCAGCAGGCGCGCGACCCAGAAAAAAACGACCTAAAAATGTCCATATTT
TGTGTATATATCCCTTTTTTTGTTGTTTCTCCAATTGCAAGAAAGTGATA
TTTAATACGTATCATATTACACCCCGCACGTTCAGGCGGCCCCCGGGATA
ACCATCTTCGTCAACAACAGTACGGCACCCACCGCTACGCCAATAGCACC
ACCACCCATCCAGACATCATCCACAACAATGCCACCCACGATCTTGTTTT
CAGCCCTCCCATCTCCATGGCGGCAGCCGACCGCGCTCCGGCCCACGGAA
GTGCTGGCGGCATCACGCTGGCCACTAGCGGCTGGTCCACCGACGAGGAA
GATTTTGTCATGATGGGTGCCGCGACGCCGCCTCCGCCGCCGCCGCCACC
CCCACCCCCACCGCCGCCGCCGCTGGGGTTAGGGTTAAGTCGGCGGCAGG
ACAGCGACTTAGGCGGCAGCGGTAGTGGCAGTATGGGGATGTTTGCAGCG
GAAATCGAGGTAAGAGTCGGGCGGCCACCTTTGGACCGGCAGGACTCAAC
GGCGGCGGCGGCGGCGGCTGCGCGAGCCGAGCAGACACGGCGCGTGGCGG
TCGCCGAGGCGGACTATAAGGAAGCAGCGCACCGGCATGCAATGGAGGAC
CCGACGTACAGGGGGATCCGCGGGGCGCCTCGTGGG

Coding sequence (CDS) from alignment at H-paniculata_contig14320:4135..6570-

>mRNA_H-paniculata_contig14320.2612.1 ID=mRNA_H-paniculata_contig14320.2612.1|Name=mRNA_H-paniculata_contig14320.2612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2700bp|location=Sequence derived from alignment at H-paniculata_contig14320:4135..6570- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCAGCGTAACAAGCAGCGGGTCAGGGAAATATGTTGGTATCGGAGGCGG
CAGCGAGGAAAGAACGAGGTCTCGAAGAAAATCCGTGGGGGCGCTGCAAG
GGTTCGGCAGCTTAATAACTCGCAGGGGCAGCGTAACAAGCAGCGGGTCA
GGGAAATATGTTGGTATCGGAGGCGGCAGCGAGGAAAGAACGAGGTCTCG
AAGAAAATCCGTGGGGGCGCTGCAAGGGTTCGGCAGCTTAATAACTCGCA
GGGTCTCGCGCGGATCGAACGCTTCCTCCCACAGCGACTTCTCAGACTCG
GGGGGCAGAAAGGCCAGCGGGGGCGTGGGCGAACTATCCACAAAAGCCGT
AGACCGCCTGAGGAAGACAAACACAGTGCCCGGAGGCCTGAGCTCATCCA
GCATGGCCATCATGGGCGGCGGCGGGCTGGGGGGGCTAGGCTCTCCCGCC
GCCATCGGCGGACATCGAAAGCGAGAAAGTTGGGGTATGACTGCCGCTGA
AAAGGCTGCTGTGCAGACGCTGGAGATCAGGAGGCCGGATGATTTGCCCC
ACAGCAATAAAGCGTGGAAGGTCCTTGGACGGTCGCCGCCCCCGCCAGGA
GCGGTGGGGAGCGGCGGTGGGTCATTGGCCATTGGGCGGGGGAGGTCGAA
AAAGGCTTCTTCGTTGTCGTCGAAGAATTTGGGGACGCGATCGAGCTCGG
TTCCTTTGGGACCGCAGGTCTCGCGCGGATCGAACGCTTCCTCCCACAGC
GACTTCTCAGACTCGGGGGGCAGAAAGGCCAGCGGGGGCGTGGGCGAACT
ATCCACAAAAGCCGTAGACCGCCTGAGGAAGACAAACACAGTGCCCGGAG
GCCTGAGCTCATCCAGCATGGCCATCATGGGCGGCGGCGGGCTGGGGGGG
CTAGGCTCTCCCGCCGCCATCGGCGGACATCGAAAGCGAGAAAGTTGGGG
TATGACTGCCGCTGAAAAGGCTGCTGTGCAGACGCTGGAGATCAGGAGGC
CGGATGATTTGCCCCACAGCAATAAAGCGTGGAAGGTCCTTGGACGGTCG
CCGCCCCCGCCAGGAGCGGTGGGGAGCGGCGGTGGGTCATTGGCCATTGG
GCGGGGGAGGTCGAAAAAGGCTTCTTCGTTGTCGTCGAAGAATTTGGGGA
CGCGATCGAGCTCGGTTCCTTTGGGACCGCAGGTAACACATGGGAGCGCC
CACCAGCTCAAGCTACCCTCGGAGCCACCCTCCTCGACGTCGTTGTCGTT
GCAAGGTTTTCACCACCCTGTCGGATCATGGTCTGCCTTCAGCGCGGTGA
CCGCCACGCCGTCCGTCGACAGCACGGGTGAGACACCATCGTCATCGAGA
GATATCGGCGGAGGCAGAGGCGGAGGCGGAGGCGCAGCAGGTAACACATG
GGAGCGCCCACCAGCTCAAGCTACCCTCGGAGCCACCCTCCTCGACGTCG
TTGTCGTTGCAAGGTTTTCACCACCCTGTCGGATCATGGTCTGCCTTCAG
CGCGGTGACCGCCACGCCGTCCGTCGACAGCACGGGTGAGACACCATCGT
CATCGAGAGATATCGGCGGAGGCAGAGGCGGAGGCGGAGGCGCAGCAGGC
GGCCCCCGGGATAACCATCTTCGTCAACAACAGTACGGCACCCACCGCTA
CGCCAATAGCACCACCACCCATCCAGACATCATCCACAACAATGCCACCC
ACGATCTTGTTTTCAGCCCTCCCATCTCCATGGCGGCAGCCGACCGCGCT
CCGGCCCACGGAAGTGCTGGCGGCATCACGCTGGCCACTAGCGGCTGGTC
CACCGACGAGGAAGATTTTGTCATGATGGGTGCCGCGACGCCGCCTCCGC
CGCCGCCGCCACCCCCACCCCCACCGCCGCCGCCGCTGGGGTTAGGGTTA
AGTCGGCGGCAGGACAGCGACTTAGGCGGCAGCGGTAGTGGCAGTATGGG
GATGTTTGCAGCGGAAATCGAGGTAAGAGTCGGGCGGCCACCTTTGGACC
GGCAGGACTCAACGGCGGCGGCGGCGGCGGCTGCGCGAGCCGAGCAGACA
CGGCGCGTGGCGGTCGCCGAGGCGGACTATAAGGAAGCAGCGCACCGGCA
TGCAATGGAGGACCCGACGTACAGGGGGATCCGCGGGGCGCCTCGTGGGG
CGGCCCCCGGGATAACCATCTTCGTCAACAACAGTACGGCACCCACCGCT
ACGCCAATAGCACCACCACCCATCCAGACATCATCCACAACAATGCCACC
CACGATCTTGTTTTCAGCCCTCCCATCTCCATGGCGGCAGCCGACCGCGC
TCCGGCCCACGGAAGTGCTGGCGGCATCACGCTGGCCACTAGCGGCTGGT
CCACCGACGAGGAAGATTTTGTCATGATGGGTGCCGCGACGCCGCCTCCG
CCGCCGCCGCCACCCCCACCCCCACCGCCGCCGCCGCTGGGGTTAGGGTT
AAGTCGGCGGCAGGACAGCGACTTAGGCGGCAGCGGTAGTGGCAGTATGG
GGATGTTTGCAGCGGAAATCGAGGTAAGAGTCGGGCGGCCACCTTTGGAC
CGGCAGGACTCAACGGCGGCGGCGGCGGCGGCTGCGCGAGCCGAGCAGAC
ACGGCGCGTGGCGGTCGCCGAGGCGGACTATAAGGAAGCAGCGCACCGGC
ATGCAATGGAGGACCCGACGTACAGGGGGATCCGCGGGGCGCCTCGTGGG

mRNA_H-paniculata_contig14320.2612.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

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