Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 779 |
| Cds size | 534 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14275.2590.1 >prot_H-paniculata_contig14275.2590.1 ID=prot_H-paniculata_contig14275.2590.1|Name=mRNA_H-paniculata_contig14275.2590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MHRRCTVTLLASTLLRLDCAAALLPGTGLALSTAATAPSFTRTSNHHDHQ
HAPPDPSRRRPGGSRPSSSFFSTPVLTAARARTKAARLPAATVIATTATP
SSSTSTSSKRYRQHGQRQQKQQRRYPPPHRTPSSRPFTVDPTWGLRPPSA
DTVIGERPVTALRMANSAEQDKAVGGSG back to topmRNA from alignment at H-paniculata_contig14275:3640..6285+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14275.2590.1 ID=mRNA_H-paniculata_contig14275.2590.1|Name=mRNA_H-paniculata_contig14275.2590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2646bp|location=Sequence derived from alignment at H-paniculata_contig14275:3640..6285+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCCGAAGTCAAAAAGGCTCTCTCAAACCTTCCTTGCTCAGACTTCGCAT
AATACTGGTTCTGGAAGGAAAACTCCGTGGGTCTTTGGTTGAAAGCTCTC
TGTGTACACAACCACAGGAGCATTAGCCTATCAACCCATTGCCTGCACCA
CGCAAAATCCATCGTGCACATCATCGTCTGCTGTGAACGACGCTTGTGCG
GTGACGTCGAGTGACGTGTCGTGCGAACCGTTACACAGATACGAGATGCA
CCGCCGATGCACTGTGACACTCCTCGCTTCGACTCTACTGCGCCTTGACT
GCGCTGCAGCTCTTCTTCCTGGTGAGTGTGCTAAAGTGATTAAACAAATC
CACCGCCCGCTGCTATAGAGTTGGCTCGCAACGTTTCCATTTCTTGTGTA
CTCTGCATTGTCTCTCCAACGACAGACAATTCAGTATCCGTTACATGCAC
ATTGGCGAAAATTGAGCATCCATCCTTCAGCCTGCGGGCGATTACATTTT
TAGTTCTCCCGATAGGCTGACAGTACATTCCGCTCTCTGTAAGGATTATT
TTCAGGGCGTCGTGCACATAAATGTCGCCTAATAGTCAATGAATTTTGCG
ATGTATAGTGTAGAACCCACCGCATCTTTGTGATATCTACGCACATTTTA
ACCCTAAACTCGAACTCGCAGATCCTCTAATGCGTTGGCAAGCGTGGAGT
TCCCAACTGTGTCACACTTGGCAGGTTGTGGATCAAACTATGAGCCATAG
GCCGTAATTATCATAATGCGGAAACTCTGGCAGTCTGCCGGAAATATTTG
TGTCGACGACATGGTTTCGCGAAATAACACCAAACACATGCAGTTGTACT
GTACTGTGAGGTACCGTTGTACACGGGTGGAAGATGGCGACGGGCACCAA
GGTAAATGTGATTCCAGAGGTTTGCAGAGTGATCGTTTAACCCTTAAACC
TACCTTTACACAATGTGGAATCTTGCTACATTGGCCATCTCATATCAAAG
CTTTCAACCACCAACAAGGACCGCAAATGGACCAAGGCACGCTAGGCTCT
TGCGTTGATGTCGGGGGCAAATTACGTACGAGAGACTTGTATTTCAGAAC
GATGAATATGCGTGGACGTGAGCAAAGCAGTGTGCCTAACACTGACAGAC
TATGCACTCTGGAAGGTTGTAATTTTGTGCAGTATCTTGGACAGCGCGGG
AGCAGACTGCGATCATGGATCTGACAGATGATGAGGACACGAATTGCAGG
AACACTACGGTCGTGTTCGCTTCTTCAACTAGGCTCCCAAATAGAATATA
CTATCAGTCAGCAATAGATCACCCTCACTGACAACTTGCGACAGTCAGCA
CAGTCGGTGGGACTTGGTGGGAAAGACACGTGATATTCTTTTTTCATATT
CGACACTTGCGAAACAACACCACCAGCAATAGTTTAGAGCATAGGTTTAG
GGTTGATTTTGGCTAGAGTTGAAAATCGCGTCGTACCCAATCGTTTCTCC
GTCGATATATCGAGGGTAATATCGAAGCTATAGTTGTATTAAGTATTTGC
GTTTCTATCCAGCGATACTGTTTATCGATTACGACGGTATCGATCTACTC
GATACCAATTTCTTACCCCATTCATATCACACGCAGAGGTTCGCAACTTG
TTGGTGTGACTGCATGTCCATTATCGACACCATACTTGGGGGCGCAGCTT
GTTGTCCGTATGGGACTAACCAGATGCCAGGTATATTACACAGACGAGAG
AAGATGCAGAGGTAGCTTTTCGCGGGGTGGTCATTATTGTATGTAGAGTC
ATCGACTGACTCTTGATATCTAACACCAAACGCCTTCTTACAATTGACCT
AATACCCTAACGGTCAAGATCTTAATTTAAATCAATAATTTGTTGTTCAA
CATTTGTCGATGGAGCCATGCTCAATAAACGTTTGTCACAATGATCGATA
GATAGATAGATGAACAGTTGTGTAGACACGAACAGTTGTGTAGACACTTG
TAGACGAGTGTACAGTACACTCCCGCCGCCTGTGTTAACACTTAAATTCC
TTTTTATGTGCAAATTCGGCAATATTGCAACAATAACAATAACAACAACA
AATTATCGAAATCCCGAATACCCATGATATCGAAGGCAAAAAAGAGAGGA
AAATAACACTGATTTCTGCTTCCGATGTTGCCCGACAGGAACAGGATTAG
CACTCTCAACAGCAGCAACAGCCCCGTCCTTTACGAGGACCTCCAACCAC
CACGACCACCAACACGCGCCACCTGACCCATCTCGCCGGCGCCCCGGTGG
CAGCAGGCCATCATCCTCCTTCTTCTCGACCCCCGTTCTCACTGCTGCAC
GAGCTCGTACCAAGGCCGCTCGGCTCCCCGCGGCCACAGTAATAGCAACG
ACAGCGACACCATCATCATCAACATCAACCAGCTCAAAGCGATATCGACA
ACACGGACAACGCCAACAAAAACAACAACGCAGATATCCCCCGCCGCACC
GGACACCTTCATCGCGACCCTTTACCGTCGATCCAACGTGGGGCCTAAGG
CCGCCAAGCGCGGATACAGTAATCGGGGAGCGCCCCGTTACGGCGTTACG
GATGGCGAATTCAGCGGAGCAGGATAAGGCGGTCGGGGGCAGTGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig14275:3640..6285+ >mRNA_H-paniculata_contig14275.2590.1 ID=mRNA_H-paniculata_contig14275.2590.1|Name=mRNA_H-paniculata_contig14275.2590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig14275:3640..6285+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACCGCCGATGCACTGTGACACTCCTCGCTTCGACTCTACTGCGCCT
TGACTGCGCTGCAGCTCTTCTTCCTGATGCACCGCCGATGCACTGTGACA
CTCCTCGCTTCGACTCTACTGCGCCTTGACTGCGCTGCAGCTCTTCTTCC
TGGAACAGGATTAGCACTCTCAACAGCAGCAACAGCCCCGTCCTTTACGA
GGACCTCCAACCACCACGACCACCAACACGCGCCACCTGACCCATCTCGC
CGGCGCCCCGGTGGCAGCAGGCCATCATCCTCCTTCTTCTCGACCCCCGT
TCTCACTGCTGCACGAGCTCGTACCAAGGCCGCTCGGCTCCCCGCGGCCA
CAGTAATAGCAACGACAGCGACACCATCATCATCAACATCAACCAGCTCA
AAGCGATATCGACAACACGGACAACGCCAACAAAAACAACAACGCAGATA
TCCCCCGCCGCACCGGACACCTTCATCGCGACCCTTTACCGTCGATCCAA
CGTGGGGCCTAAGGCCGCCAAGCGCGGATACAGTAATCGGGGAGCGCCCC
GTTACGGCGTTACGGATGGCGAATTCAGCGGAGCAGGATAAGGCGGTCGG
GGGCAGTGGGGAACAGGATTAGCACTCTCAACAGCAGCAACAGCCCCGTC
CTTTACGAGGACCTCCAACCACCACGACCACCAACACGCGCCACCTGACC
CATCTCGCCGGCGCCCCGGTGGCAGCAGGCCATCATCCTCCTTCTTCTCG
ACCCCCGTTCTCACTGCTGCACGAGCTCGTACCAAGGCCGCTCGGCTCCC
CGCGGCCACAGTAATAGCAACGACAGCGACACCATCATCATCAACATCAA
CCAGCTCAAAGCGATATCGACAACACGGACAACGCCAACAAAAACAACAA
CGCAGATATCCCCCGCCGCACCGGACACCTTCATCGCGACCCTTTACCGT
CGATCCAACGTGGGGCCTAAGGCCGCCAAGCGCGGATACAGTAATCGGGG
AGCGCCCCGTTACGGCGTTACGGATGGCGAATTCAGCGGAGCAGGATAAG
GCGGTCGGGGGCAGTGGG back to top
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