Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 2086 |
| Cds size | 1083 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14253.2580.1 >prot_H-paniculata_contig14253.2580.1 ID=prot_H-paniculata_contig14253.2580.1|Name=mRNA_H-paniculata_contig14253.2580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
MAQRKRKLCSHEGCPKRPSYGLGGTGKAEICAQHAEKGMVNVRSQRCSHE
GCTKNPSYGSAITKRRQFCRQHAEEGMVDVVSKRCSHEGCTKNPSYGWAV
TRKREACREHAQDGMVDVLHRKRCSHNGCSKFPSFGLSGTKKSEFCAYHA
EEGMVHVAKKTCVQEGCAKQPSYGLSGTRKAELCRQHAQDGMVDVLSKRC
SHEGCSKQPSYGSPGTKIAECCSQHAEDGMVDVVSRRCSHGNCSTLPSYG
LAGSSKRKFCRRHAQDGMIYVNSRRTCSRAACTKAPSYGLPSTQKVAYCR
RHAEIGMVDLVSRRCEQEGCSKIPSFGFLTGTKKAKFCLEHAKKGMVNVR
RKTASPEAAV* back to topmRNA from alignment at H-paniculata_contig14253:4466..6551+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14253.2580.1 ID=mRNA_H-paniculata_contig14253.2580.1|Name=mRNA_H-paniculata_contig14253.2580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2086bp|location=Sequence derived from alignment at H-paniculata_contig14253:4466..6551+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGTCGTAACTTTGGAGATATCAGCGGTGGCAAGTTGTACCGCGGACA
GGGCAGGCGTTCTACCACGGCTTACCGACTACTGCTGTATGGGCTTGATC
ACCAGCTCGACAGGGGGATACAGTGCGATAGGCACGCTGGACGTTCGGTT
CACACGTCTTTCTTTGGTCCCCTGCGCCCCCAACACGTGGAGCGCTGTAG
CTGGTGCTCCGAAAAGGAAATGGCACAGCGCAAGAGGAAGTTGTGCTCCC
ACGAGGGCTGCCCCAAGAGGCCGTCGTATGGGTTAGGAGGAACCGGAAAG
GCGGAGATCTGTGCGCAGCATGCGGAGAAAGGAATGGTGAACGTGCGGAG
TCAAAGGTGCTCCCACGAAGGCTGCACCAAGAACCCATCCTACGGGTCGG
CGATTACCAAAAGGAGGCAATTCTGTCGACAGCACGCTGAGGAAGGTATG
GTAGACGTGGTGAGCAAGAGGTGCTCCCACGAAGGTTGCACCAAAAACCC
GTCGTATGGATGGGCGGTCACCCGAAAGAGAGAGGCCTGCCGAGAGCACG
CTCAAGATGGCATGGTGGACGTCTTGCACCGCAAGAGATGCTCTCACAAC
GGATGTTCCAAGTTTCCGTCGTTTGGATTATCGGGCACGAAAAAATCGGA
GTTCTGTGCATATCATGCCGAGGAGGGGATGGTTCATGTGGCCAAGAAGA
CGTGTGTCCAAGAGGGCTGCGCTAAGCAGCCATCGTATGGGTTGTCGGGC
ACCAGGAAGGCGGAGCTCTGTCGACAGCACGCTCAGGACGGGATGGTAGA
CGTGTTGAGCAAGAGATGCTCTCATGAAGGCTGCTCAAAGCAACCCTCGT
ATGGGTCACCGGGCACTAAAATAGCGGAGTGTTGTTCGCAGCACGCGGAG
GACGGGATGGTGGACGTGGTGAGCAGGAGGTGTTCCCACGGGAACTGCTC
GACGCTGCCATCGTATGGGTTGGCTGGCAGCTCTAAGCGGAAGTTCTGTC
GGCGACATGCCCAGGACGGAATGATATATGTCAATAGCCGGAGGACGTGC
TCCCGCGCGGCTTGCACCAAAGCCCCGTCGTATGGGTTGCCTAGCACCCA
GAAGGTGGCGTACTGTCGGCGGCACGCCGAGATTGGCATGGTGGACTTGG
TGAGCAGGAGGTGCGAGCAGGAGGGCTGCTCGAAGATACCATCATTCGGC
TTCTTGACAGGGACCAAAAAGGCGAAGTTTTGTCTGGAGCATGCGAAGAA
GGGGATGGTTAACGTAAGGCGCAAGACCGCGTCCCCCGAAGCCGCTGTTT
AAAGCTGAAGTAGTTTGAAATTATCGTCCCGATTGCAGGGGCCAGGGTTG
TTGTGCCTCCAAGTGCAGTGTTTGGGAACAATTACGAATTTCTCACCTGC
TATGCGTTCACAGACGAGCAGCACAGATGCACTCTCACCGAAATTGGAAA
GCTAAGCGAACCCGTCATGAGGCTGATCCCTGGCCACTCTTCACCAGTCG
CCCTCTACGTTGCTGTTAGTCTGGAAAATTAGTGCACGGGGCGAGAGAGT
CATGGGGCGATTGATCGAACGACCCATCACACCGTGTTGTCTATAACGTG
TTCAAGGTTTTATTCCGCAGGAGCGGAATCGAAAATGCAGGGTATGTATA
TTTTCAAGTGGAGCCTACGTTCGGCGCTTCAAAGCTACCCCCACCATTAC
AGTAGTTTTCAGCATCAGCTCAACTGTTCCATGCTGTATGTAAAAAGCAA
TTGGTTTCAAGAACAGTGTCCGAACACGGAACAAGGAGATGAAAGAGTTT
GCGCTTGGCCAACATGTTTGAGTAGACACTGCCACCCTGTGACTCGAGGA
GTGCCCCCTCTTCGATTTCGATCGTAGTGCGACTAGAGTGTCTGTCAGGC
GTTTGATGAGTTGTCTCCCTATTCATGACATACACACGGCCCAGTTTTTT
GCGACGGTACGAGTAATGTACAGTAGTAGTGTACTTCCACGAGCAGTTGC
ACTTACAGCGATTGCCCTGCCTTGCTTGCCTTGGCAGCATGCGTTCCTCG
TCGCTACCGATCGTTTATAGTGCTGAGTATTTGCAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig14253:4466..6551+ >mRNA_H-paniculata_contig14253.2580.1 ID=mRNA_H-paniculata_contig14253.2580.1|Name=mRNA_H-paniculata_contig14253.2580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at H-paniculata_contig14253:4466..6551+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACAGCGCAAGAGGAAGTTGTGCTCCCACGAGGGCTGCCCCAAGAG
GCCGTCGTATGGGTTAGGAGGAACCGGAAAGGCGGAGATCTGTGCGCAGC
ATGCGGAGAAAGGAATGGTGAACGTGCGGAGTCAAAGGTGCTCCCACGAA
GGCTGCACCAAGAACCCATCCTACGGGTCGGCGATTACCAAAAGGAGGCA
ATTCTGTCGACAGCACGCTGAGGAAGGTATGGTAGACGTGGTGAGCAAGA
GGTGCTCCCACGAAGGTTGCACCAAAAACCCGTCGTATGGATGGGCGGTC
ACCCGAAAGAGAGAGGCCTGCCGAGAGCACGCTCAAGATGGCATGGTGGA
CGTCTTGCACCGCAAGAGATGCTCTCACAACGGATGTTCCAAGTTTCCGT
CGTTTGGATTATCGGGCACGAAAAAATCGGAGTTCTGTGCATATCATGCC
GAGGAGGGGATGGTTCATGTGGCCAAGAAGACGTGTGTCCAAGAGGGCTG
CGCTAAGCAGCCATCGTATGGGTTGTCGGGCACCAGGAAGGCGGAGCTCT
GTCGACAGCACGCTCAGGACGGGATGGTAGACGTGTTGAGCAAGAGATGC
TCTCATGAAGGCTGCTCAAAGCAACCCTCGTATGGGTCACCGGGCACTAA
AATAGCGGAGTGTTGTTCGCAGCACGCGGAGGACGGGATGGTGGACGTGG
TGAGCAGGAGGTGTTCCCACGGGAACTGCTCGACGCTGCCATCGTATGGG
TTGGCTGGCAGCTCTAAGCGGAAGTTCTGTCGGCGACATGCCCAGGACGG
AATGATATATGTCAATAGCCGGAGGACGTGCTCCCGCGCGGCTTGCACCA
AAGCCCCGTCGTATGGGTTGCCTAGCACCCAGAAGGTGGCGTACTGTCGG
CGGCACGCCGAGATTGGCATGGTGGACTTGGTGAGCAGGAGGTGCGAGCA
GGAGGGCTGCTCGAAGATACCATCATTCGGCTTCTTGACAGGGACCAAAA
AGGCGAAGTTTTGTCTGGAGCATGCGAAGAAGGGGATGGTTAACGTAAGG
CGCAAGACCGCGTCCCCCGAAGCCGCTGTTTAAATGGCACAGCGCAAGAG
GAAGTTGTGCTCCCACGAGGGCTGCCCCAAGAGGCCGTCGTATGGGTTAG
GAGGAACCGGAAAGGCGGAGATCTGTGCGCAGCATGCGGAGAAAGGAATG
GTGAACGTGCGGAGTCAAAGGTGCTCCCACGAAGGCTGCACCAAGAACCC
ATCCTACGGGTCGGCGATTACCAAAAGGAGGCAATTCTGTCGACAGCACG
CTGAGGAAGGTATGGTAGACGTGGTGAGCAAGAGGTGCTCCCACGAAGGT
TGCACCAAAAACCCGTCGTATGGATGGGCGGTCACCCGAAAGAGAGAGGC
CTGCCGAGAGCACGCTCAAGATGGCATGGTGGACGTCTTGCACCGCAAGA
GATGCTCTCACAACGGATGTTCCAAGTTTCCGTCGTTTGGATTATCGGGC
ACGAAAAAATCGGAGTTCTGTGCATATCATGCCGAGGAGGGGATGGTTCA
TGTGGCCAAGAAGACGTGTGTCCAAGAGGGCTGCGCTAAGCAGCCATCGT
ATGGGTTGTCGGGCACCAGGAAGGCGGAGCTCTGTCGACAGCACGCTCAG
GACGGGATGGTAGACGTGTTGAGCAAGAGATGCTCTCATGAAGGCTGCTC
AAAGCAACCCTCGTATGGGTCACCGGGCACTAAAATAGCGGAGTGTTGTT
CGCAGCACGCGGAGGACGGGATGGTGGACGTGGTGAGCAGGAGGTGTTCC
CACGGGAACTGCTCGACGCTGCCATCGTATGGGTTGGCTGGCAGCTCTAA
GCGGAAGTTCTGTCGGCGACATGCCCAGGACGGAATGATATATGTCAATA
GCCGGAGGACGTGCTCCCGCGCGGCTTGCACCAAAGCCCCGTCGTATGGG
TTGCCTAGCACCCAGAAGGTGGCGTACTGTCGGCGGCACGCCGAGATTGG
CATGGTGGACTTGGTGAGCAGGAGGTGCGAGCAGGAGGGCTGCTCGAAGA
TACCATCATTCGGCTTCTTGACAGGGACCAAAAAGGCGAAGTTTTGTCTG
GAGCATGCGAAGAAGGGGATGGTTAACGTAAGGCGCAAGACCGCGTCCCC
CGAAGCCGCTGTTTAA back to top
|