mRNA_H-paniculata_contig1414.2524.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 2.660e-128 Identity = 228/386 (59.07%), Postives = 279/386 (72.28%), Query Frame = 3 Query: 414 RGVRRRPRVVAAEDSNPLGWAMSQLG---ATRGNGDGTPRSVSTAGLEGWRDWKNLDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPAISHS----AVGTDIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGMG--EASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLEASDEANGLMMAMA 1544 RG RRPRV ++ +A ++ G G S STA DW++L E+E LCE I+E+RR+Q+LQVELE RPVTVQEWA+AAGHP+AHQL AALQEGRKA+RTL CHQGLVRSVA RY +S++LS +DL QEG++GLLQAV +FDPTKG RFSSYAVFRIKAS+LRAIA+KDRL+RVPVHAQDAAMR+LAA HALQ +SG PTDAQLA+AL MPE +VALYR+ L L +++A LD+ A+S S A G RGG +G EQWPW EA +LA+ +VR DM+R M+ CL+P E +ALRLRFG+G E G ALTFKEIG ME+S EGIR+MV R++ KL+ASDEANGL++A A Sbjct: 66 RGGIRRPRVPSSPAQEKALFATARRRNAFVVEGGGANPVTSSSTA------DWRDLTKEEETALCELIVENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESG--GDVPTDAQLAVALGMPEASVALYRKSL-LPQNIADLDNSALSGSPQGRAAGGGSRGGRVGGEQWPW------EASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYA 436
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI) HSP 1 Score: 383 bits (983), Expect = 2.420e-124 Identity = 216/359 (60.17%), Postives = 264/359 (73.54%), Query Frame = 3 Query: 498 RGNGDGTPRSVSTAGLEGWRDWKNLDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPAISHS--------AVGTDIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGMG--EASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLEASDEANGLMMAMA 1544 RG G S ST DW++L E+E LCE I+E+RR+Q+LQVELE RPVTVQEWA+AAGHP+AHQL AALQEGRKA+RTL CHQGLVRSVA RY +S++LS +DL QEG++GLL+AV +FD TKG RFSSYAVFRIKAS+LRAIA+KDRL+RVPVHAQDAAMR+LAA HALQ +SG PTDAQLA+AL MPE +VALYR+ L L +++A LD+PA+ S A G GG +G EQWPW EA +LA+ +VR DM+R M+ CL+P E +ALRLRFG+G E G ALTFKEIG ME+S EGIR+MV R++ KL+ASDEANGL+++ A Sbjct: 35 RGGGANPVTSSSTT------DWRDLTKEEETALCELIIENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESG--GDVPTDAQLAVALGMPEASVALYRKSL-LPQNIADLDNPALPSSPQGRGGSGAAGGGSLGGRVGGEQWPW------EASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYA 378
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.730e-58 Identity = 134/316 (42.41%), Postives = 188/316 (59.49%), Query Frame = 3 Query: 570 LDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPAISHSAVGTDIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGM-GEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLEASD 1514 LD + E L I EH R+ Q +LE GR V EWA AAG+ + + AAL+EG+KA+ LV + +VR++A +YA ++KSL+ +DL+QEG++GLL A +FDP KG RF +YA FR+KAS+LRAIANKDR IR+PVH QD A ++ +A LQ G PTDA++A L M V +R +D A++ +AV +D + P R +EM ED+ RV+ L P+E++AL+LRFG+ G+A+G LTFKE+GG M+ S EGIRR+V RA++KL + Sbjct: 47 LDPDVENALYAAIREHSRIHAKQEQLECILGRSALVAEWASAAGYMDSMSMLAALREGQKAQTKLVKSQRAMVRAIAKKYAFITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVTLG---RPPTDAEIAATLDMLPSEVTAHRE---------MMDKEAVTVNAV-SDRDVMAFAARATPQAR---------SEMV---EDLKRVLELYLAPKEIEALQLRFGLDGQAAG-------PLTFKEVGGSMQTSAEGIRRIVSRALDKLREGE 330
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: A0A1J0A9P1_9CYAN (RNA polymerase sigma factor SigD n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A1J0A9P1_9CYAN) HSP 1 Score: 125 bits (314), Expect = 4.840e-28 Identity = 97/314 (30.89%), Postives = 160/314 (50.96%), Query Frame = 3 Query: 570 LDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPAISHSAVGT--DIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLE 1505 L E+E L Q+ ++Q +++ E G+P++ EWA AG A +L + G A+R ++ + LV SVA +Y + +++ DL+QEG++G+ + V +FDP+KG RFS+YA + I+ +I RAIA K R IR+P+H + + + L + G A+ P +LA+AL + + V Y + ++ HP VG D G L +Q P + +A++ V D LTP++ Q +RLR+G+ EA LT IG +M IS E +R++ A+ +L+ Sbjct: 27 LSHEEEVALGRQVQTLAQLQAQRIQREQELGQPISQAEWAQVAGCSLA-ELERHCKAGEHAKRKMIEANLRLVVSVAKKY--VKRNVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKMNKFKRVQRELAQELGRAASIP---ELAVALELTPNQVREY---------LERMRHPLSLDVKVGDNLDTELGDLLEDQGPSPEEYAAQNSLMADINSVLND--------LTPQQRQVIRLRYGLEG--------EAPLTLSRIGELMNISRERVRQIEREALTRLK 309
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: A0A3M2AWN1_9BACT (RNA polymerase sigma factor n=4 Tax=Terrabacteria group TaxID=1783272 RepID=A0A3M2AWN1_9BACT) HSP 1 Score: 127 bits (318), Expect = 7.460e-28 Identity = 102/350 (29.14%), Postives = 170/350 (48.57%), Query Frame = 3 Query: 501 GNGDGTPRSVSTAGLEGW----RDWKNLDVEDEKDLCEQILEHRRVQNLQVELEVSA---GRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRG----LPLQRHVAKLDHPAISHSAVGTDIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLEASDE 1517 G G+ TP + +E W R + L E+E +Q+ E R+ ++ ++ V+ +WA AA P +L A +QE +A+R L+ + LV S+A RYAS + +S DL+QEG++GL++AV +FDP +G RFS+YA + I+ +I RA+ N R IR+PV+ + +++ E LQ + PTD ++A M + V RR + ++ V + D+ + DI P L+ + + ++ E L P E +RLRFG+ + G Q T +E+G ++I+ E +R++ RA+ KL E Sbjct: 70 GVGEETPHEEDSVEIELWMLQSRRSQLLTPEEEIRFAQQVQEGERLYKIRKQIAEKRKMDAESVSEDDWAKAANLPN-WELAARIQEAEEAKRRLIESNLRLVVSIAKRYAS--RGISLADLIQEGNLGLIRAVEKFDPDRGFRFSTYATWWIRRAIARAVINNSRTIRIPVYVAELINKVIKTELRLQQ---ILQREPTDEEIAAETKMSVERVREIRRAAVEPISIESPVGERDNATLGEFIPSQDIV-----------------PTPEDVTARLILREQIDMILEKLQPRERDVVRLRFGLDD---GHQR-----TLEEVGAELKITRERVRQLELRALRKLRLIGE 388
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: UPI0019DF3EF8 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019DF3EF8) HSP 1 Score: 124 bits (310), Expect = 1.520e-27 Identity = 96/287 (33.45%), Postives = 149/287 (51.92%), Query Frame = 3 Query: 645 LEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPAISHSAVGTDIRGGGLGSEQWPWTRVGGGEAPR-LAEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKL 1502 LE GR T EWA A+G T L AA++EG +A+R +V + LV SVA +Y + +++ DL+QEG++G+ + V +FDPTKG RFS+YA + I+ +I RAIA K R IR+P+H + ++ A+ L G T T ++LA L + V Y L++ S + D+R G + G +P A +R D+ ++M + LTP++ Q L LRFG+ + +T +IG M+ IS E +R++ A+ KL Sbjct: 48 LEEKLGRSPTQAEWAEASGLST-QALAAAIREGEQAKRKMVEANLRLVVSVAKKY--IKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKRAQRQLSQKHG---RTATVSELAAELELSPKLVREY-----LEK----------SRQPLSLDLRVGDNQDTELSDLLEDDGPSPEEFATQAALRRDLDKLMVD-LTPQQRQVLNLRFGLDDGQ--------TMTLAKIGEMLSISRERVRQIEREALTKL 304
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: UPI0008F9CA57 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9CA57) HSP 1 Score: 124 bits (310), Expect = 1.560e-27 Identity = 101/329 (30.70%), Postives = 164/329 (49.85%), Query Frame = 3 Query: 570 LDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALY----RRGLPLQRHVAKLDHPAISHSAVGTDIRGGGLGSEQWPWTRVGGGEAPR-LAEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLEASDEANGLMMAM 1541 L E+E +Q+ + ++Q ++ EL S GR T+ EWA AA + QL L G A+R +V + LV SVA +Y + +++ DL+QEG++G+ + V +FDPTKG RFS+YA + I+ +I RAIA K R IR+P+H + ++ A+ L + G AT A+LA L + + Y R+ L L++ V + T G +P A + ++ D+ +M++ LTP++ + L LRFG+ + ALT +IG + IS E +R++ A+ KL G +A+ Sbjct: 24 LTHEEEIYYGKQVQKFNQLQEVKKELTESQGREPTMSEWA-AAADLSVEQLQKQLARGEHAKRKMVEANLRLVVSVAKKY--IKRNVDLMDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRNLSQNLGRAATV---AELAEELDLSPKQIREYLERARQPLSLEQRVGDNQDTELGDLLEDT-------------------GPSPEDFATQSSLKADLTELMQD-LTPQQKEVLALRFGLEDGK--------ALTLSKIGDRLNISRERVRQIEREALTKLRKRKAQMGEYLAI 318
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: A0A7S1TGP2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGP2_9RHOD) HSP 1 Score: 125 bits (314), Expect = 2.070e-27 Identity = 105/327 (32.11%), Postives = 160/327 (48.93%), Query Frame = 3 Query: 561 WKNLDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPA--ISHSAVGTDIRGGGLGSEQWPWTRVGGGEAPRL-AEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKLEASDEANGLM 1532 +K L E E +L + I + + GR + EWAM P +Q GR+A+ +V + LV S+A +Y L++ LS +DL+QEGS+GL++ +FD KG +FS+YA + I+ +I RAIA++ R IR+PVH D + A LQ + G P D ++A L MP D V R R L+ P S + +G I +W GE P L+RED+ V+R L+P E + +R+R+G + GR T +EIG + ++ E IR++ +A+ KL NGL+ Sbjct: 101 YKLLSSESEVELAKDIKMLLKYERRYTNFREGIGRIPSELEWAMECAVPL-RDFRIRIQRGRRAKERMVAANLRLVVSIAKKY--LNRGLSFQDLIQEGSIGLIRGTEKFDAEKGYKFSTYATWWIRQAITRAIADQSRPIRLPVHVNDTLSAIKKATKVLQHELG---RAPDDEEIAERLKMPVDKVRFVARSA---RSTVSLETPIGKESENTLGCFI--------EWE------GETPEEEVSKNLLREDLESVLRT-LSPREREVIRMRYGFDD---GRMK-----TLEEIGHLFSVTRERIRQIEAKALRKLRHPTR-NGLL 394
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: A0A831XPK3_9BACT (RNA polymerase sigma factor n=2 Tax=Bacteria TaxID=2 RepID=A0A831XPK3_9BACT) HSP 1 Score: 125 bits (315), Expect = 2.600e-27 Identity = 107/365 (29.32%), Postives = 181/365 (49.59%), Query Frame = 3 Query: 516 TPRSVSTAGLEGW----RDWKNLDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQE-----WAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRG----LPLQRHVAKLDHPAISHSAVGTDIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAM-------EKLEASDEANGLMMAMALA 1550 TP + +E W R + L E+E +Q+ E R+ ++ +L + R V+V+E WA A G P ++L L+E +A+R L+ + LV SVA RYA+ + +S DL+QEG++GL++AV +FDP++G RFS+YA + I+ +I RA+ N R IR+PV+ + +++ E LQ + PTD ++A M + V RR + ++ V + D+ + TDI P ++ + + ++ + L P E +RLRFG+ + G Q T +E+G ++I+ E +R++ RA+ E+LE + GL + ALA Sbjct: 96 TPHEDDSVDVELWMLQSRRSQLLTPEEEIRYAQQVQEGERLHKVRQQL--AEKRKVSVEEISEAEWAEAVGLPP-YELAYRLEEAEEAKRRLIESNLRLVVSVAKRYAT--RGISLADLIQEGNLGLIRAVEKFDPSRGFRFSTYATWWIRRAIARAVINNGRTIRIPVYVAELINKVIKTEMRLQQ---ILQREPTDEEIAQETGMSVERVREIRRASIEPISIESPVGERDNATLGEFIPSTDIV-----------------PTPEDVTRQMILREQIEMILQKLQPRERDVVRLRFGLDD---GHQR-----TLEEVGAELKITRERVRQLELRALRKLRLIGERLEDLRKTRGLELEEALA 427
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Match: UPI0019EADD56 (RNA polymerase sigma factor RpoD n=1 Tax=Geminocystis sp. M7585_C2015_104 TaxID=2774334 RepID=UPI0019EADD56) HSP 1 Score: 124 bits (311), Expect = 4.080e-27 Identity = 98/313 (31.31%), Postives = 162/313 (51.76%), Query Frame = 3 Query: 570 LDVEDEKDLCEQILEHRRVQNLQVELEVSAGRPVTVQEWAMAAGHPTAHQLFAALQEGRKAERTLVFCHQGLVRSVANRYASLSKSLSCEDLVQEGSMGLLQAVSRFDPTKGCRFSSYAVFRIKASILRAIANKDRLIRVPVHAQDAAMRLLAAEHALQSDSGLGATTPTDAQLALALTMPEDTVALYRRGLPLQRHVAKLDHPAISH--SAVGTDIRGGGLGSEQWPWTRVGGGEAPRLAEMTLVREDMLRVMRECLTPEELQALRLRFGMGEASGGRQAVEAALTFKEIGGMMEISGEGIRRMVHRAMEKL 1502 L E+E +L QI + ++ ++ +L+ GR T +EWA A P+ Q + L GR+A+ +V + LV S+A +Y +++ LS +DL+QEGS+GL++A +FD KG +FS+YA + I+ +I RAIA++ R IR+PVH + R+ L G PT+ ++A + M + + + L L+ P S +G I G E +A+ L+RED+ V+ + L+P E LRLR+G+ + GR T +EIG + ++ E IR++ +A+ KL Sbjct: 90 LRAEEEIELARQISDLLEMEYIRNKLKEHLGRKPTDEEWAQACNMPSLRQFYRRLHLGRRAKDKMVQSNLRLVVSIAKKY--MNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKMLSQKMG---RKPTEEEIAEDMEMTIEKLRFIAKSAQLP---ISLETPIGKEEDSRLGDFIEADGENPED------------EVAK-NLLREDLENVL-DSLSPRERDVLRLRYGLDD---GRMK-----TLEEIGQIFNVTRERIRQIEAKALRKL 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1414.2524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1414.2524.1 >prot_H-paniculata_contig1414.2524.1 ID=prot_H-paniculata_contig1414.2524.1|Name=mRNA_H-paniculata_contig1414.2524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=463bp MDPTVAALRRGWGENRQLRRPRIVGTRLRSQCRCCCVAVAGALLSFISGDback to top mRNA from alignment at H-paniculata_contig1414:18051..21111+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1414.2524.1 ID=mRNA_H-paniculata_contig1414.2524.1|Name=mRNA_H-paniculata_contig1414.2524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3061bp|location=Sequence derived from alignment at H-paniculata_contig1414:18051..21111+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1414:18051..21111+ >mRNA_H-paniculata_contig1414.2524.1 ID=mRNA_H-paniculata_contig1414.2524.1|Name=mRNA_H-paniculata_contig1414.2524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2778bp|location=Sequence derived from alignment at H-paniculata_contig1414:18051..21111+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |