mRNA_H-paniculata_contig14096.2499.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 5.190e-54 Identity = 125/338 (36.98%), Postives = 187/338 (55.33%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLISTKEPK-------IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASE--EAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKHVN 1238 D CVFR I + VV ++++VDD+ +E + + T +K++G++ +Y RD +KI Q YA + FG+ +P G K SE + EE+ + RE +G L+ AT TRPDIA+AVR + C P H RA + IL Y++R++DLGIT+ G + M + ++DYA+ RRSVSGG+V+ GGG ISW +R ++ T TT A++V+LA+ + EVL LRQV F++P + + ED QGA ++A N S+ +HI+V+HH +R+ V ++ I + QH D LTKAL FE H N Sbjct: 104 DTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL---------KLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRN 432
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.560e-52 Identity = 125/338 (36.98%), Postives = 187/338 (55.33%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLISTKEPK-------IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASE--EAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKHVN 1238 D CVFR I + VV ++++VDD+ +E + + T +K++G++ +Y RD +KI Q YA + FG+ +P G K SE + EE+ + RE +G L+ AT TRPDIA+AVR + C P H RA + IL Y++R++DLGIT+ G + M + ++DYA+ RRSVSGG+V+ GGG ISW +R ++ T TT A++V+LA+ + EVL LRQV F++P + + ED QGA ++A N S+ +HI+V+HH +R+ V ++ I + QH D LTKAL FE H N Sbjct: 278 DTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL---------KLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRN 606
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 183 bits (464), Expect = 8.520e-51 Identity = 120/329 (36.47%), Postives = 184/329 (55.93%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLISTKEPK-------IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASE--EAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGK-VDIVCMGVGEQHVDVLTKAL 1208 D CVFR I + VV ++++VDD+ +E + + T ++K++G++ +Y RD +KI Q YA + FG+ +P G K SE + EE+ + RE +G L+ AT TRPDIA+AVR + C P H RA + IL Y++R++D GIT+ G + M + ++DYA+ RRSVSGG+V+ GGG ISW +R ++ T TT A++V+LA+ + EVL LRQV F++P + + ED QGA ++A N S+ ++HI+V+HH +R+ V K + I + QH D LT+AL Sbjct: 3 DTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERYDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGM---------KLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 193 bits (490), Expect = 2.030e-50 Identity = 124/338 (36.69%), Postives = 187/338 (55.33%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLISTKEPK-------IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASE--EAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKHVN 1238 D CVFR I + VV ++++VDD+ +E + + T +K++G++ +Y RD +KI Q YA + FG+ +P G K SE + EE+ + RE +G L+ AT TRPDIA+AVR + C P H RA + IL Y++R++DLGIT+ G + M + ++DYA+ RRSVSGG+V+ GGG ISW +R ++ T TT A++V+LA+ + EVL LRQV F++P + + ED QGA ++A N S+ +HI+V+HH +R+ V ++ I + QH + LTKAL FE H N Sbjct: 799 DTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL---------KLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRN 1127
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 183 bits (464), Expect = 2.920e-50 Identity = 116/336 (34.52%), Postives = 187/336 (55.65%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLL-ISTKEPKIMTNHKL------KDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGIT--KTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKH 1232 D CVFR + + V+ +I+++VDD+ + KE L K++G + +Y RD + ++I Q +A +A +GI ++ LP + +N+ AS + RE VG L+ AT TRPDIA+AVR + C P + H +A + IL Y+ R++ +GIT+ G + M + ++DYA+ RRSVSGG+V+ GGG ++W +R ++ T TT A++VA+A+ + EVL LRQV F++P + + ED QGA ++ HN ++ +HI+V+HH +R+ VE ++ I + QH D LTKA+ + SF H Sbjct: 42 DACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENE---ASADVP------FRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALH 368
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A0A9X648_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X648_LYGHE) HSP 1 Score: 184 bits (466), Expect = 8.990e-50 Identity = 110/333 (33.03%), Postives = 187/333 (56.16%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLISTKEP--------KIMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAG-NNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGG-QDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSF 1223 D CV+ K VD +V+ ++ YV+DLLI + + ++M ++ D+G + L F +TRDR ++K+ I Q Y M +RF + + + + N + K P ++E+A +M +EAVG L+ A+ ++RPDI AV ++ ++PG AH AV +IL Y+ SA + +GG + +++ Y++SD+A+ +D RRSV+G + + G ISW T+ + TT A+++A + V E L LR + A + P+ + P +I D QGA+ +A N R +HI+V+HH VR+ + G++ + + E D LTK+L+R Sbjct: 105 DSCVYFKFVDSQVL-IVACYVEDLLILSNDKVMKNKLKEQLMKTFQMTDLGEANFVLGFKLTRDRAKKKVWISQERYISDMLKRFNMHECNPVDTPLSPNEKLSKEQSPVSAEDAAKMKNVPYQEAVGSLLFASQVSRPDINFAVSYVSRFSKNPGTAHWGAVKRILRYLKGSAHWKLEFGGGMEVVTDIVGYSDSDWASDQDERRSVTGYIFMKNGSPISWSTKKQPTIALSTTEAEYMATSAAVQEALWLRGLAAEMFPSSTFKPTLIYVDNQGAQNLAINGAYQARTKHIDVRHHFVRERINNGEIKLQHVSTKEMVADSLTKSLDREKL 436
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 180 bits (457), Expect = 4.040e-49 Identity = 116/335 (34.63%), Postives = 191/335 (57.01%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLIS-TKEPKIMTNHKL------KDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEM--LAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKH 1232 DPCV R ++ EV+ + I+VDD+L + TK + L K++G V ++L I+RDR+ I+I Q Y R++ ERF I +TS +PA+ N++ ++ E EE RE VG L+ A TRP+ ++AVR ++ +P + +A KIL Y+ +A L + Y QD V++ L Y ++D+A+ RRSVSG +VL+ G +SW + ++ + T+ A+++A+ + V E + + F+ P+ + + + ED +GA +A N SS R +HI+V+HH +R+ E G +++ + EQH D+LTKAL R+ FE H Sbjct: 50 DPCVLRFMMGDEVMGIFAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPASPANDS-------RSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYK-QDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFH 376
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 182 bits (462), Expect = 4.050e-49 Identity = 112/334 (33.53%), Postives = 185/334 (55.39%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLLISTKEPK-------IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCE-VEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKH 1232 D CVFR I D VV +++++VDD+ + + + + +K++G + +Y R+++ ++ I Q + +A +G+ +P ++G +K A E A E RE VG L+ AT TRPDIA+AVR + C P + H A + IL Y R++ GI++ E + Y ++D+A+ RRSVSGG+V GGGA+SW +R ++ T TT A++VAL + V E+L LRQ+ F++P + + + ED QGA ++A N S+ +HI+V+HH +R+ VE ++ ++ + Q D LTK+L + +FE H Sbjct: 128 DACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSG----VKLSDFDADEVATEFPF---RELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 454
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.290e-48 Identity = 116/337 (34.42%), Postives = 186/337 (55.19%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLL-ISTKEPKIMTNHKL------KDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGIT--KTSMLPATAGNNTMIKNDGPKASEEAEEMWASL-CREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVIIKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKH 1232 D CVFR + + V+ +I+++VDD+ + KE L K++G + +Y RD + ++I Q +A +A +GI ++ LP + +N E A + RE VG L+ AT TRPDIA+AVR + C P + H +A + IL Y+ R++ +GIT+ G + M + ++DYA+ RRSVSGG+V+ GGG ++W +R ++ T TT A++VA+A+ + EVL LRQV F++P + + ED QGA ++AHN ++ +HI+V+HH +R+ VE ++ I + QH D LTKA+ + S H Sbjct: 104 DACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDEN----------EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLH 430
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.450e-48 Identity = 116/335 (34.63%), Postives = 185/335 (55.22%), Query Frame = 3 Query: 255 DPCVFRKIVDREVVAVIIIYVDDLL-ISTKEPKIMTNHKL------KDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYG-GQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*AKHVALAETVNEVLLLRQVQAFIMPTLEYYPVI-IKEDTQGAEKMAHNKHSSRRMRHIEVKHHIVRDEVEAGKVDIVCMGVGEQHVDVLTKALERSSFEKH 1232 D CVFR + D EVV +++++VDD+ + TKE L K +G + +Y + RDR+ ++ I Q Y + + ER G+ +P T D E + +L +G L+ A +TRPDIA+AVR + C +P + H RA + IL Y +R++ GI++ G ++ + ++DYA+ RRSVSGGVV+ GGAI+W ++ ++ T TT A++VA+A+ E+L LR+V F++P E P I + ED +GA ++A + S+ +HI+V+HH +R V+ +V+I+ + QH D LTKAL F H Sbjct: 50 DSCVFRLVEDGEVVLILVVHVDDIFAVGTKERCDQFGKDLGEYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPLPT---TWRLWDSDVNEPSVEYPFRAL----IGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPK-ELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKALPERDFVFH 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14096.2499.1 >prot_H-paniculata_contig14096.2499.1 ID=prot_H-paniculata_contig14096.2499.1|Name=mRNA_H-paniculata_contig14096.2499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp MLEYEGYRGPHGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKback to top mRNA from alignment at H-paniculata_contig14096:130..1391+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14096.2499.1 ID=mRNA_H-paniculata_contig14096.2499.1|Name=mRNA_H-paniculata_contig14096.2499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1262bp|location=Sequence derived from alignment at H-paniculata_contig14096:130..1391+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14096:130..1391+ >mRNA_H-paniculata_contig14096.2499.1 ID=mRNA_H-paniculata_contig14096.2499.1|Name=mRNA_H-paniculata_contig14096.2499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig14096:130..1391+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |