prot_H-paniculata_contig14096.2499.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14096.2499.1
Unique Nameprot_H-paniculata_contig14096.2499.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length244
Homology
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438DEJ3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DEJ3_VITVI)

HSP 1 Score: 131 bits (330), Expect = 8.930e-33
Identity = 79/236 (33.47%), Postives = 130/236 (55.08%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKE 236
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +RFG+  +K    P   G+   + N  PK S E++EM        VG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  K 
Sbjct:   74 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKSFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRFGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASVVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSSTKS 306          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A0J7KA47_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KA47_LASNI)

HSP 1 Score: 135 bits (341), Expect = 9.960e-33
Identity = 82/234 (35.04%), Postives = 134/234 (57.26%), Query Frame = 0
Query:   19 DPCVFRKIVDREVVAVIIIYVDDLLISTKEPK--------IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKASEEAEEMWASL-CREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT 243
            D CV R  +D ++V ++ IYVDDLL  +K           +MT  ++  +G+  Y++ F I RDR ++ IKI Q  Y   +AE+FG+     +   A ++  +        ++ ++  A +  REAVG L+ AA ++RPDI  AV + ++  E+PG  H +AV +I+ Y   +A  GI Y GQ+    ++ Y++SDYA+  D+RRS SG + +L GGA+SW ++ + + T  TT
Sbjct:  890 DRCVMRGEIDGQLV-LLAIYVDDLLCMSKSKTAVDKVMAHLMTEFEIT-IGSTEYFVGFKIKRDRSKKTIKISQCNYLLRVAEKFGMMDAKGISTPAESHMYLSKSMAPEDDDGKQAMAKIPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGPEHWQAVKRIIRYAKETATYGIVYDGQNTN-GLIVYSDSDYASDPDTRRSTSGYITVLAGGAVSWMSQRQRIVTLSTT 1120          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438JKQ9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JKQ9_VITVI)

HSP 1 Score: 134 bits (337), Expect = 3.360e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E + Y++SD+A C+DSRRS+SG + LL GGAISW +  + + T+ T
Sbjct:  793 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLEFIGYSDSDFAGCQDSRRSISGYIYLLAGGAISWRSAKQTLVTSST 1031          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438CGK4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CGK4_VITVI)

HSP 1 Score: 134 bits (336), Expect = 4.450e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  647 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 885          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438E561_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E561_VITVI)

HSP 1 Score: 134 bits (336), Expect = 4.540e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  833 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 1071          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438CGN0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CGN0_VITVI)

HSP 1 Score: 134 bits (336), Expect = 4.590e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  726 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 964          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438CE37_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CE37_VITVI)

HSP 1 Score: 134 bits (336), Expect = 4.630e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  874 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 1112          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438JDV8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JDV8_VITVI)

HSP 1 Score: 134 bits (336), Expect = 4.630e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  859 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 1097          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A5BKR0_VITVI (Uncharacterized protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5BKR0_VITVI)

HSP 1 Score: 134 bits (336), Expect = 4.700e-32
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ + K        +KD+G+  + L   I RDR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E++ Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  999 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 1237          
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Match: A0A438CR04_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CR04_VITVI)

HSP 1 Score: 133 bits (335), Expect = 5.040e-32
Identity = 80/242 (33.06%), Postives = 134/242 (55.37%), Query Frame = 0
Query:   11 HGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPKIMTNHK--------LKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGI--TKTSMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDIAHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLAYTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGT 242
            +G     +D CV+ K    + +  +++YVDD+L++T +  I+ N K        +KD+G+  + L   I +DR    + + Q  Y   + +R+G+  +K    P   G+   + N  PK S E++EM       AVG L+ A   TRPDIA+ V +  +   +PG+ H RA  +++ Y+ R+ +  +TY   D ++E + Y++SD+A C+DSRRS SG + LL GGAISW +  + + T+ T
Sbjct:  385 YGFEANLMDECVYHKFSGSKYIF-LVLYVDDILLATNDISILHNTKRFLSKHFEMKDLGDASFVLGIQIHQDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSL-NQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLEFIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSST 623          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14096.2499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438DEJ3_VITVI8.930e-3333.47Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7KA47_LASNI9.960e-3335.04Retroelement pol polyprotein n=1 Tax=Lasius niger ... [more]
A0A438JKQ9_VITVI3.360e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CGK4_VITVI4.450e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E561_VITVI4.540e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CGN0_VITVI4.590e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CE37_VITVI4.630e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JDV8_VITVI4.630e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]
A5BKR0_VITVI4.700e-3233.06Uncharacterized protein n=2 Tax=Vitis vinifera Tax... [more]
A0A438CR04_VITVI5.040e-3233.06Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 89..238
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 89..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14096contigH-paniculata_contig14096:330..1079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14096.2499.1mRNA_H-paniculata_contig14096.2499.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14096 130..1391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14096.2499.1 ID=prot_H-paniculata_contig14096.2499.1|Name=mRNA_H-paniculata_contig14096.2499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MLEYEGYRGPHGESVRAIDPCVFRKIVDREVVAVIIIYVDDLLISTKEPK
IMTNHKLKDVGNVGYYLVFHITRDRKERKIKIDQHLYARSMAERFGITKT
SMLPATAGNNTMIKNDGPKASEEAEEMWASLCREAVGVLICAATITRPDI
AHAVRITTKNCEDPGVAHKRAVVKILHYILRSADLGITYGGQDCEVEMLA
YTNSDYATCKDSRRSVSGGVVLLGGGAISWHTRAKEVATAGTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like