mRNA_H-paniculata_contig14046.2472.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A6H5JD73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD73_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.560e-33 Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMGYNGILDVYVHWGMPMGSHSDNALCSAGV 307 SAVMILFTSFTA+TSFVVFGLL DYAVPLFF+GLVATA GQ+GTDYLI KF+RPSFI+LSI SVVALSA LMG NG+ D+ +H G ++ +CSAGV Sbjct: 407 SAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAMGQYGTDYLINKFKRPSFIILSIASVVALSAFLMGINGLYDI-LH--PTAGGDEEDGICSAGV 505
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: D7FV47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV47_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.340e-22 Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMG 223 SAVMIL+TSFTA+TSF+VFGLL DYA+ LF +GL ATA GQ ++L++K++R SFIVLSIG+VVALSAV+MG Sbjct: 7 SAVMILYTSFTATTSFMVFGLLEEDYAIALFVVGLAATAVGQVVVNHLVKKYKRTSFIVLSIGAVVALSAVMMG 80
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A836CFF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFF2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.420e-21 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMGYNGILDVYVHWGMPMGSHSDNALCSAG 304 SA MILFTSFTA+TSF+VFGLLR DYA +F +GL+AT GQ G +YL+Q++QR S I++SIG+VVALSA+LMG + + P C+AG Sbjct: 126 SACMILFTSFTATTSFMVFGLLRRDYAQLMFVVGLLATFVGQVGVNYLVQRYQRSSLIIVSIGAVVALSALLMGGQSLYFL----AFPRQDDESGGFCAAG 222
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A7R9YCQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCQ0_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 6.690e-21 Identity = 48/74 (64.86%), Postives = 64/74 (86.49%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMG 223 SA MIL+TSFTA++SF+ FG+++ DYA+ LFF+GLVATA GQ G +YLI+K++R S I+LSIGSVV+LS V+MG Sbjct: 172 SACMILYTSFTATSSFIAFGMVKYDYAIFLFFVGLVATAAGQLGVNYLIKKYKRQSLIILSIGSVVSLSTVMMG 245
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A835ZGS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.620e-20 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMGYNGILDVYVHWGMPMGSHSDNALCSAG 304 SA MILFTSFTA+TSF+VFGLLR DYA +F +GL+AT GQ G +YL+Q++QR S I++SIG+VVALSA+LMG + + P C+AG Sbjct: 426 SACMILFTSFTATTSFMVFGLLRRDYAQLMFVVGLLATFVGQVGVNYLVQRYQRSSLIIVSIGAVVALSALLMGGQSLYFL----AFPRQDDESGGFCAAG 522
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A4D9D1X1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.380e-18 Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMGYNGILDVYVHWGMPMGSHSDNALCSA 301 SA MILFTSFTA+TSF +F LL DYAV LF IG + T+ GQ+G YL++++ R S+I+ SIG+VV LSA+LMG I+ ++ G G + A+C A Sbjct: 425 SACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFS--GPGSGGKAGGAICDA 522
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A7S0AWA8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWA8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.630e-18 Identity = 54/98 (55.10%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMGYNGILDVYVHWGMPMGSHSDNALC 295 SA MILFTSFTA+TSFVVFGLL DYA+ F IG +AT GQ G YL++KFQR S+I SIG VV LSA LM I +Y P H +C Sbjct: 20 SACMILFTSFTATTSFVVFGLLIPDYAMICFTIGFLATLVGQIGLFYLMKKFQRNSYIAFSIGFVVLLSAFLMT---IQSLYSMAEEPRKGHGSGGVC 114
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A7S4DAW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAW5_HETAK) HSP 1 Score: 92.0 bits (227), Expect = 1.160e-17 Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMG 223 SAVMIL+TSF+A+TSFVVFGLLR DY LF +G++ TA GQ G +YL++K R S+I++SIG+VVALS +MG Sbjct: 397 SAVMILYTSFSAATSFVVFGLLRYDYGFMLFVVGIICTAVGQVGVNYLVKKSGRGSYIIMSIGAVVALSTAMMG 470
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A6V1T5B1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T5B1_HETAK) HSP 1 Score: 92.0 bits (227), Expect = 1.220e-17 Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMG 223 SAVMIL+TSF+A+TSFVVFGLLR DY LF +G++ TA GQ G +YL++K R S+I++SIG+VVALS +MG Sbjct: 420 SAVMILYTSFSAATSFVVFGLLRYDYGFMLFVVGIICTAVGQVGVNYLVKKSGRGSYIIMSIGAVVALSTAMMG 493
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Match: A0A7S3K149_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K149_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.060e-17 Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 2 SAVMILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQRPSFIVLSIGSVVALSAVLMGYNGILDVYVHWG---MPMGSHSDNALCSAG 304 +A MIL TS TA+T+F+VFGLL DY LF++G++ATA GQ G YLI+K R S++ SIG+VV LS +LMG++G++ + MP H + +C G Sbjct: 394 TACMILLTSTTAATTFIVFGLLAKDYGFHLFWVGVLATAVGQLGMSYLIKKSGRQSYVAFSIGAVVGLSTILMGFHGLISLAYQRADADMPGTPHHRSGICQVG 497 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14046.2472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14046.2472.1 >prot_H-paniculata_contig14046.2472.1 ID=prot_H-paniculata_contig14046.2472.1|Name=mRNA_H-paniculata_contig14046.2472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp MILFTSFTASTSFVVFGLLRMDYAVPLFFIGLVATAFGQWGTDYLIQKFQback to top mRNA from alignment at H-paniculata_contig14046:301..2697+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14046.2472.1 ID=mRNA_H-paniculata_contig14046.2472.1|Name=mRNA_H-paniculata_contig14046.2472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2397bp|location=Sequence derived from alignment at H-paniculata_contig14046:301..2697+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14046:301..2697+ >mRNA_H-paniculata_contig14046.2472.1 ID=mRNA_H-paniculata_contig14046.2472.1|Name=mRNA_H-paniculata_contig14046.2472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig14046:301..2697+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |