prot_H-paniculata_contig14012.2453.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14012.2453.1
Unique Nameprot_H-paniculata_contig14012.2453.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length260
Homology
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: D7FT74_ECTSI (UBX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT74_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.020e-75
Identity = 165/276 (59.78%), Postives = 182/276 (65.94%), Query Frame = 0
Query:    1 MADVLNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSC---GITESSGQLVGLPPAVA--------TTHAGVLEFVADEGTIGLPRKVVLSLL--AEQTVPRESSGATDGGGGE------QTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLK 257
            MAD LNLDSR  KL+KEQQ+RRDAA                     X           XXXXXXXXXXX DQIRT GI YKESLL V A+GEGDK+LLPPSAL+ LSRQDAV +GPMLFEL+C   G   +S Q     PA+         TTHAGVLEFVADEGTIGLPRKVVLSLL  A   VP  +S        +      +   ++ L  V +RYVRLAKATFARVVPETVGLSQVSELRAMLEHNM+ HATLT+GD LSVWRRGKEF LK
Sbjct:    1 MADFLNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLK 276          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A4D9CT31_9STRA (UBX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT31_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.870e-41
Identity = 90/195 (46.15%), Postives = 117/195 (60.00%), Query Frame = 0
Query:   75 TGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGA-----TDGGGGEQTTMLKKLGI-----VAIRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS 259
            T GI Y   L P    GEGDK++LPPSAL++L++QDA+++GPMLF+LS  +     +   LP     THAGVLEF A++G IGLP KV  SL+AE    RE          +G GGE+              V ++YVRL K T+A+V P T  L  V EL+ MLE N+Q HATL+ GD L VW RG+ F L+V+
Sbjct:   71 TAGITYSCDLWPYTVSGEGDKIILPPSALETLTQQDALALGPMLFQLSL-LPAEGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLVAEPEETREDGSRGMKERVEGPGGEEGDSRASPAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVT 264          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A7S3XVE0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVE0_HETAK)

HSP 1 Score: 115 bits (289), Expect = 1.130e-28
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 0
Query:  138 AVATTHAGVLEFVADEGTIGLPRKVVLSL-LAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKV 258
            A  TTH GVLEF A+EG +GLP KV+ SL +A +    +  G      G+          V I+Y+RL KATFA++ PE  GLSQ+ E+RA+LEHNM+ HATL++GD+L VW RGK F  +V
Sbjct:   11 AAGTTHCGVLEFTAEEGCVGLPPKVLASLGIAPEQDNTQHQGVAPSSVGQ----------VQIKYIRLEKATFAKIRPEKAGLSQIDEIRAVLEHNMRNHATLSLGDKLIVWFRGKAFECEV 122          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: F0W152_9STRA (Uncharacterized protein AlNc14C412G11460 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W152_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.360e-27
Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 0
Query:   71 DQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGL-SQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKV 258
            +++RT GIHY  SL PV    +GD + LPPSAL+ L+ Q+A  +G   FELS         L  + P +  THA VLEF A+E TIG+P KV   LL  Q+VP+                      + IR+VRL +  FAR  P+  G  ++  +L+ +LE ++ +H TLT+GD + V    K F + V
Sbjct:   69 EELRTAGIHYSCSLKPVPISSDGDLITLPPSALEELTAQEAFRVGKFTFELSV-------MLPNVAPCLQVTHASVLEFTAEEETIGVPPKVARCLLFSQSVPKS---------------------IQIRFVRLERGLFARFQPKEEGFGAREIDLKLVLERSLHRHTTLTIGDTVLVRHGRKTFEISV 229          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: T0RDP2_SAPDV (UBX domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RDP2_SAPDV)

HSP 1 Score: 119 bits (297), Expect = 3.650e-27
Identity = 108/253 (42.69%), Postives = 142/253 (56.13%), Query Frame = 0
Query:    9 SRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVV--LSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKV 258
            SR RKL KEQ+ RR+AA   XXXXXXXXXX          + ++RK EQ  XXXXXXXXX  D+  TGGI YK++L  VA + +GDK+ LP SAL++L+ Q+A+ MG + FEL    T  S          ATTHA VLEFVADEGTIG+P K+   L LL   +V                        + +R+VRLA+  F ++ P   G      +L+A+LE  ++ H T+T GD L V + G  F + V
Sbjct:    7 SRARKLAKEQEARREAARKKXXXXXXXXXXAEKLRVEMELESQRRKAEQLQXXXXXXXXXLEDERVTGGIAYKQTLRAVAIDNDGDKITLPVSALEALNPQNALDMGVLSFEL----THLS----------ATTHASVLEFVADEGTIGIPPKIAKSLDLLTHDSVA-----------------------IGVRFVRLARGRFVQLQPLGDGFGDRQLDLKALLERTLKNHTTITQGDILLVRQGGVTFDIAV 222          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: M4BJ97_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ97_HYAAE)

HSP 1 Score: 113 bits (282), Expect = 1.430e-26
Identity = 84/250 (33.60%), Postives = 124/250 (49.60%), Query Frame = 0
Query:    5 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKE 253
            ++L+SR  K  +EQ++RR+ A                         +Q+++E+             +Q  TGGI Y + L P    G+GDK+ LP SAL++L+ Q+A+ +G   FEL   +TE   +L  +      THAGVLEFVA+EGT+GLP KV  SL  +    +E   AT                + +R+V+L +  FAR+ P   G      +L+ +LE  +Q H TLT GD L V R G+E
Sbjct:    3 VDLNSRNAKWNREQKKRREQARCKIEAERQKRVAAAKAREALESLQQQKRVERLAESERQAEQLLEEQRLTGGIKYVQELRPFPTVGDGDKITLPVSALEALNPQNALELGVFTFEL--WVTEMGTELSEVGTVKRRTHAGVLEFVAEEGTVGLPPKVAASLFRQM---KEQPPAT----------------IHVRFVQLEQGKFARLQPRGDGFGDRQIDLKHLLECALQTHTTLTEGDVLFV-RHGRE 230          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A3M6VL54_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL54_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.100e-26
Identity = 90/261 (34.48%), Postives = 129/261 (49.43%), Query Frame = 0
Query:    5 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCG---ITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQT-VPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGL-SQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKE-FGLKVS 259
            L+L+SR  K  +EQ +RR+                        +  +Q+++E+             +Q  TGGI Y + L PV    +GDK+ LP SAL+ L+ Q+A+ +G   FELS     +T++SG+          THAGVLEFVADEGT+GLP KV  SL    T +P                     G + +R+VRL K TFA + P+  G   +  + + MLE +++ H TLT GD L + R GKE F + VS
Sbjct:    3 LDLNSRNVKWNREQNKRREQIKRKIEKERRDSAVAAKAHEELEKMQQQKRVERNAELERQEQQALEEQRITGGIKYLQQLRPVPTTEDGDKITLPVSALEELNPQNALELGVFTFELSFEDQYVTQTSGETT----IKRQTHAGVLEFVADEGTVGLPPKVAASLFKYATEIP---------------------GSIQVRFVRLEKGTFASLQPKGNGFCDRQIDFKHMLERSLKTHTTLTEGDVLFI-RHGKETFEVLVS 237          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A1V9YQB9_9STRA (UBX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQB9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.440e-26
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 0
Query:    9 SRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKV 258
            SR +KL KEQ+ RR+AA  XXXXXXXXXXXXXXXXXXXX + ++RK E              ++  TGGI Y+++L  V  + +GDK+ LP SAL++L+ Q+A+ MG + FEL+C            P A   THA VLEFVADEG+IG+P K+ +SL   + +P +S                    + +R+VRLAK  F ++ P   G      + +A+LE  ++ H TLT GD L V + G  F + V
Sbjct:    7 SRGKKLAKEQEARREAARKXXXXXXXXXXXXXXXXXXXXXESQRRKAELLERAAQEELDRLEEERVTGGISYRKTLRAVPIDNDGDKITLPVSALEALNPQNALDMGVLSFELTC------------PLATTKTHASVLEFVADEGSIGIPPKIAMSL---RLMPLDSVD------------------IDVRFVRLAKGQFVQLQPLADGFGDRQLDFKALLERTLKTHTTLTEGDILLVRQGGVTFDVAV 224          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A0W8CLD7_PHYNI (Ubiquitin fusion degradation protein 1 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CLD7_PHYNI)

HSP 1 Score: 114 bits (286), Expect = 1.500e-25
Identity = 86/250 (34.40%), Postives = 119/250 (47.60%), Query Frame = 0
Query:    5 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKE 253
            L+L+SR  K  +EQ +RR+ A                      +   Q+++E+             +Q  TGGI Y + L PV   G+GDK+ LP SAL+ L+ Q+A+ +G   FELS    +  G+      A   THAGVLEFVADEGT+GLP KV  SL       R +    D               + +R+VRL K  FA + P   G      + + MLE +++ H TLT GD L V R G+E
Sbjct:    3 LDLNSRNAKWNREQNKRREQAKRKIETERRKRAAAAKASEELEKLQMQKRVERIAELERQEQQALEEQRLTGGIRYLKQLRPVPTTGDGDKIALPVSALEELNPQNALELGVFTFELSFDEDQQGGEA---SIAKRQTHAGVLEFVADEGTVGLPPKVAASLF------RHTKELPDS--------------IQVRFVRLEKGKFASLQPRGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFV-RHGRE 228          
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A329RIV7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RIV7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.940e-25
Identity = 86/250 (34.40%), Postives = 117/250 (46.80%), Query Frame = 0
Query:    5 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKE 253
            L+L+SR  K  +EQ +RR+ A                      +   Q+++E+             +Q  TGGI Y + L PV  +G+GDK+ LP SAL+ L  Q+A+ +G   FELS       G   G       THAGVLEFVA+EGT+GLP KV  SL                     T  L   G + +R+VRL K  FA + P   G      + + MLE +++ H TLT GD L V R G+E
Sbjct:    3 LDLNSRNSKWNREQNKRREQAKRKIETERRKRAAVAKAREELEKLQMQKRVERIAELERQEQQALEEQRLTGGIKYLQQLRPVPTKGDGDKITLPVSALEELDPQNALELGVFTFELSFDEDHHDG---GASTLKRQTHAGVLEFVAEEGTVGLPPKVATSLF------------------RYTKQLP--GSIKVRFVRLEKGRFATLQPRGEGFGDRQIDFKHMLERSLKTHTTLTEGDVLFV-RHGRE 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT74_ECTSI3.020e-7559.78UBX domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CT31_9STRA1.870e-4146.15UBX domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S3XVE0_HETAK1.130e-2849.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0W152_9STRA2.360e-2737.57Uncharacterized protein AlNc14C412G11460 n=1 Tax=A... [more]
T0RDP2_SAPDV3.650e-2742.69UBX domain-containing protein n=2 Tax=Saprolegnia ... [more]
M4BJ97_HYAAE1.430e-2633.60Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VL54_9STRA3.100e-2634.48Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A1V9YQB9_9STRA3.440e-2641.04UBX domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A0W8CLD7_PHYNI1.500e-2534.40Ubiquitin fusion degradation protein 1 n=9 Tax=Phy... [more]
A0A329RIV7_9STRA3.940e-2534.40Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..73
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availableGENE3D3.10.330.10coord: 207..259
e-value: 1.3E-5
score: 27.1
NoneNo IPR availablePANTHERPTHR12555:SF22UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEINcoord: 6..258
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 92..168
e-value: 9.0E-14
score: 51.3
coord: 188..258
e-value: 3.8E-10
score: 39.5
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 6..258
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 80..173
e-value: 5.2E-14
score: 53.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14012contigH-paniculata_contig14012:1286..5287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14012.2453.1mRNA_H-paniculata_contig14012.2453.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14012 1108..5742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14012.2453.1 ID=prot_H-paniculata_contig14012.2453.1|Name=mRNA_H-paniculata_contig14012.2453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp
MADVLNLDSRQRKLQKEQQERRDAARRRIQKDKSTREAAARDQNRIDEQI
RQRKLEQRRKEEEERRKEEADQIRTGGIHYKESLLPVAAEGEGDKVLLPP
SALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFV
ADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIR
YVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRR
GKEFGLKVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004854Ufd1-like
IPR042299Ufd1-like_Nn