mRNA_H-paniculata_contig14012.2453.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: D7FT74_ECTSI (UBX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT74_ECTSI) HSP 1 Score: 248 bits (632), Expect = 9.520e-73 Identity = 165/276 (59.78%), Postives = 182/276 (65.94%), Query Frame = 2 Query: 179 MADVLNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSC---GITESSGQLVGLPPAVA--------TTHAGVLEFVADEGTIGLPRKVVLSLL--AEQTVPRESSGATDGGGGE------QTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLK 949 MAD LNLDSR KL+KEQQ+RRDAA X XXXXXXXXXXX DQIRT GI YKESLL V A+GEGDK+LLPPSAL+ LSRQDAV +GPMLFEL+C G +S Q PA+ TTHAGVLEFVADEGTIGLPRKVVLSLL A VP +S + + ++ L V +RYVRLAKATFARVVPETVGLSQVSELRAMLEHNM+ HATLT+GD LSVWRRGKEF LK Sbjct: 1 MADFLNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLK 276
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A4D9CT31_9STRA (UBX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT31_9STRA) HSP 1 Score: 161 bits (408), Expect = 7.370e-41 Identity = 95/207 (45.89%), Postives = 123/207 (59.42%), Query Frame = 2 Query: 401 TGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGA-----TDGGGGEQTTMLKKLGI-----VAIRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS*R*LQPTSVVRV 991 T GI Y L P GEGDK++LPPSAL++L++QDA+++GPMLF+LS + + LP THAGVLEF A++G IGLP KV SL+AE RE +G GGE+ V ++YVRL K T+A+V P T L V EL+ MLE N+Q HATL+ GD L VW RG+ F L+V+ L+PT V V Sbjct: 71 TAGITYSCDLWPYTVSGEGDKIILPPSALETLTQQDALALGPMLFQLSL-LPAEGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLVAEPEETREDGSRGMKERVEGPGGEEGDSRASPAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVTG--LEPTQAVTV 274
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A7S3XVE0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVE0_HETAK) HSP 1 Score: 115 bits (289), Expect = 5.420e-27 Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 2 Query: 590 AVATTHAGVLEFVADEGTIGLPRKVVLSL-LAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS*R*LQPTSVVRV 991 A TTH GVLEF A+EG +GLP KV+ SL +A + + G G+ V I+Y+RL KATFA++ PE GLSQ+ E+RA+LEHNM+ HATL++GD+L VW RGK F +V L+P + V Sbjct: 11 AAGTTHCGVLEFTAEEGCVGLPPKVLASLGIAPEQDNTQHQGVAPSSVGQ----------VQIKYIRLEKATFAKIRPEKAGLSQIDEIRAVLEHNMRNHATLSLGDKLIVWFRGKAFECEVLE--LRPAAACTV 133
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: T0RDP2_SAPDV (UBX domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RDP2_SAPDV) HSP 1 Score: 120 bits (300), Expect = 8.570e-26 Identity = 111/270 (41.11%), Postives = 150/270 (55.56%), Query Frame = 2 Query: 191 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVV--LSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS*R*LQPTSVVRV 991 ++ SR RKL KEQ+ RR+AA XXXXXXXXXX + ++RK EQ XXXXXXXXX D+ TGGI YK++L VA + +GDK+ LP SAL++L+ Q+A+ MG + FEL T S ATTHA VLEFVADEGTIG+P K+ L LL +V + +R+VRLA+ F ++ P G +L+A+LE ++ H T+T GD L V + G F + V R + P V++ Sbjct: 3 FDVGSRARKLAKEQEARREAARKKXXXXXXXXXXAEKLRVEMELESQRRKAEQLQXXXXXXXXXLEDERVTGGIAYKQTLRAVAIDNDGDKITLPVSALEALNPQNALDMGVLSFEL----THLS----------ATTHASVLEFVADEGTIGIPPKIAKSLDLLTHDSVA-----------------------IGVRFVRLARGRFVQLQPLGDGFGDRQLDLKALLERTLKNHTTITQGDILLVRQGGVTFDIAV--RQVLPEPQVQI 233
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A1V9YQB9_9STRA (UBX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQB9_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.580e-25 Identity = 106/268 (39.55%), Postives = 152/268 (56.72%), Query Frame = 2 Query: 191 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS*R*LQPTSVVRV 991 ++ SR +KL KEQ+ RR+AA XXXXXXXXXXXXXXXXXXXX + ++RK E ++ TGGI Y+++L V + +GDK+ LP SAL++L+ Q+A+ MG + FEL+C P A THA VLEFVADEG+IG+P K+ +SL + +P +S + +R+VRLAK F ++ P G + +A+LE ++ H TLT GD L V + G F + V R ++P V++ Sbjct: 3 FDVGSRGKKLAKEQEARREAARKXXXXXXXXXXXXXXXXXXXXXESQRRKAELLERAAQEELDRLEEERVTGGISYRKTLRAVPIDNDGDKITLPVSALEALNPQNALDMGVLSFELTC------------PLATTKTHASVLEFVADEGSIGIPPKIAMSL---RLMPLDSVD------------------IDVRFVRLAKGQFVQLQPLADGFGDRQLDFKALLERTLKTHTTLTEGDILLVRQGGVTFDVAV--RAIRPEPQVKI 235
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: F0W152_9STRA (Uncharacterized protein AlNc14C412G11460 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W152_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.660e-25 Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 389 DQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGL-SQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKV 952 +++RT GIHY SL PV +GD + LPPSAL+ L+ Q+A +G FELS L + P + THA VLEF A+E TIG+P KV LL Q+VP+ + IR+VRL + FAR P+ G ++ +L+ +LE ++ +H TLT+GD + V K F + V Sbjct: 69 EELRTAGIHYSCSLKPVPISSDGDLITLPPSALEELTAQEAFRVGKFTFELSV-------MLPNVAPCLQVTHASVLEFTAEEETIGVPPKVARCLLFSQSVPKS---------------------IQIRFVRLERGLFARFQPKEEGFGAREIDLKLVLERSLHRHTTLTIGDTVLVRHGRKTFEISV 229
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A3M6VL54_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL54_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.700e-25 Identity = 92/273 (33.70%), Postives = 134/273 (49.08%), Query Frame = 2 Query: 191 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCG---ITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQT-VPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGL-SQVSELRAMLEHNMQKHATLTMGDRLSVWRRGKE-FGLKVS*R*LQPTSVVRV 991 L+L+SR K +EQ +RR+ + +Q+++E+ +Q TGGI Y + L PV +GDK+ LP SAL+ L+ Q+A+ +G FELS +T++SG+ THAGVLEFVADEGT+GLP KV SL T +P G + +R+VRL K TFA + P+ G + + + MLE +++ H TLT GD L + R GKE F + VS L+P + + Sbjct: 3 LDLNSRNVKWNREQNKRREQIKRKIEKERRDSAVAAKAHEELEKMQQQKRVERNAELERQEQQALEEQRITGGIKYLQQLRPVPTTEDGDKITLPVSALEELNPQNALELGVFTFELSFEDQYVTQTSGETT----IKRQTHAGVLEFVADEGTVGLPPKVAASLFKYATEIP---------------------GSIQVRFVRLEKGTFASLQPKGNGFCDRQIDFKHMLERSLKTHTTLTEGDVLFI-RHGKETFEVLVSG--LKPERAINI 247
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: M4BJ97_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ97_HYAAE) HSP 1 Score: 113 bits (283), Expect = 4.470e-25 Identity = 84/250 (33.60%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 191 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKE 937 ++L+SR K +EQ++RR+ A +Q+++E+ +Q TGGI Y + L P G+GDK+ LP SAL++L+ Q+A+ +G FEL +TE +L + THAGVLEFVA+EGT+GLP KV SL + +E AT + +R+V+L + FAR+ P G +L+ +LE +Q H TLT GD L V R G+E Sbjct: 3 VDLNSRNAKWNREQKKRREQARCKIEAERQKRVAAAKAREALESLQQQKRVERLAESERQAEQLLEEQRLTGGIKYVQELRPFPTVGDGDKITLPVSALEALNPQNALELGVFTFEL--WVTEMGTELSEVGTVKRRTHAGVLEFVAEEGTVGLPPKVAASLFRQM---KEQPPAT----------------IHVRFVQLEQGKFARLQPRGDGFGDRQIDLKHLLECALQTHTTLTEGDVLFV-RHGRE 230
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: A0A0W8CLD7_PHYNI (Ubiquitin fusion degradation protein 1 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CLD7_PHYNI) HSP 1 Score: 116 bits (290), Expect = 2.270e-24 Identity = 89/268 (33.21%), Postives = 126/268 (47.01%), Query Frame = 2 Query: 191 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS*R*LQPTSVVRV 991 L+L+SR K +EQ +RR+ A + Q+++E+ +Q TGGI Y + L PV G+GDK+ LP SAL+ L+ Q+A+ +G FELS + G+ A THAGVLEFVADEGT+GLP KV SL R + D + +R+VRL K FA + P G + + MLE +++ H TLT GD L V R G+E +V L+P + + Sbjct: 3 LDLNSRNAKWNREQNKRREQAKRKIETERRKRAAAAKASEELEKLQMQKRVERIAELERQEQQALEEQRLTGGIRYLKQLRPVPTTGDGDKIALPVSALEELNPQNALELGVFTFELSFDEDQQGGEA---SIAKRQTHAGVLEFVADEGTVGLPPKVAASLF------RHTKELPDS--------------IQVRFVRLEKGKFASLQPRGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFV-RHGRET-FEVLVAELKPERAINI 245
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Match: K3WWI9_GLOUD (UBX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWI9_GLOUD) HSP 1 Score: 115 bits (289), Expect = 3.350e-24 Identity = 94/283 (33.22%), Postives = 134/283 (47.35%), Query Frame = 2 Query: 191 LNLDSRQRKLQKEQQERRDAAXXXXXXXXXXXXXXXXXXXXXXEQIRQRKLEQRXXXXXXXXXXXADQIRTGGIHYKESLLPVAAEGEGDKVLLPPSALDSLSRQDAVSMGPMLFELSCGITESSGQLVGLPPAVATTHAGVLEFVADEGTIGLPRKVVLSLLAEQTVPRESSGATDGGGGEQTTMLKKLGIVAIRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMQKHATLTMGDRLSVWRRGKEFGLKVS*R*LQPTSVVRV*MYSVR*CLL*EEEL 1036 ++L++R K +KE+Q+RRDAA Q+ XX +Q TGGI Y + L PV A +GDK+ LP SAL+ L+ Q+A +G FEL + E L THAGVLEFVA+EGT+GLP KV SL GG ++ + + ++Y+RL K FA + P VG + + + +LE +++ H TLT+GD L V R GKE +V LQP + V + + LL E + Sbjct: 3 MDLNTRGAKWKKEEQKRRDAAKRKLQTEQLKRAAADKVQREMERVQAQKXXXXXXXQAQLEELALEEQRVTGGIKYLQRLRPVPAVTDGDKITLPVSALEELNPQNAHELGVFTFEL---LYEDP-----LTQTTRKTHAGVLEFVAEEGTVGLPPKVAASLFRNL-------------GGSSNSVGQVPEAIQVKYIRLEKGKFASLQPRGVGFGEREIDFKKILERSLKAHTTLTVGDVLFV-RHGKET-FEVLVAELQPEAAVNILNTDLEVALLPSEAI 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14012.2453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14012.2453.1 >prot_H-paniculata_contig14012.2453.1 ID=prot_H-paniculata_contig14012.2453.1|Name=mRNA_H-paniculata_contig14012.2453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp MADVLNLDSRQRKLQKEQQERRDAARRRIQKDKSTREAAARDQNRIDEQIback to top mRNA from alignment at H-paniculata_contig14012:1108..5742+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14012.2453.1 ID=mRNA_H-paniculata_contig14012.2453.1|Name=mRNA_H-paniculata_contig14012.2453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4635bp|location=Sequence derived from alignment at H-paniculata_contig14012:1108..5742+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14012:1108..5742+ >mRNA_H-paniculata_contig14012.2453.1 ID=mRNA_H-paniculata_contig14012.2453.1|Name=mRNA_H-paniculata_contig14012.2453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig14012:1108..5742+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |