prot_H-paniculata_contig13966.2421.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13966.2421.1
Unique Nameprot_H-paniculata_contig13966.2421.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length273
Homology
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: A0A6H5KYH6_9PHAE (Vps54_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH6_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.030e-73
Identity = 128/160 (80.00%), Postives = 147/160 (91.88%), Query Frame = 0
Query:    1 MFFDQRFSLEDPAVFESAIMSVGTDQPERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHV 160
            MFFD+ F+L+DPAVFESA+M+ G +QPERLAH+LDLVEVCLLKQIS RS+AFFEGLKTSQDLQTHV GACTTLYQLRE+M+ M++DVLAGPMRVPQLQRRR NL+SLE TLE VA VQQSQAA++ LLAAEDYLGALDILQSAK TV+N+LGKL SL++V
Sbjct:  279 MFFDKEFTLQDPAVFESAVMAAGAEQPERLAHFLDLVEVCLLKQISHRSDAFFEGLKTSQDLQTHVTGACTTLYQLRESMRCMEKDVLAGPMRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNV 438          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.670e-71
Identity = 128/160 (80.00%), Postives = 147/160 (91.88%), Query Frame = 0
Query:    1 MFFDQRFSLEDPAVFESAIMSVGTDQPERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHV 160
            MFFD+ F+L+DPAVFESA+M+ G +QPERLAH+LDLVEVCLLKQIS RS+AFFEGLKTSQDLQTHV GACTTLYQLRE+M+ M++DVLAGPMRVPQLQRRR NL+SLE TLE VA VQQSQAA++ LLAAEDYLGALDILQSAK TV+N+LGKL SL++V
Sbjct:  194 MFFDKEFTLQDPAVFESAVMAAGAEQPERLAHFLDLVEVCLLKQISHRSDAFFEGLKTSQDLQTHVTGACTTLYQLRESMRCMEKDVLAGPMRVPQLQRRRGNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNV 353          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.460e-35
Identity = 79/157 (50.32%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    2 FFDQRFSLEDPAVFESAIMSVGTDQPERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLK 158
            FFD  F+L++PAVFE  +   G  Q ERL HYLDLVEV LL QIS RS+AF EGL+T+  L+  V+ ACT++ QLR  M R++ +V+   +RVPQL +R+ NL SL+  LE V  +++S+ AV+ LLAA+DY GALD+L+ A+R +  DL  +  L+
Sbjct:  232 FFDPSFNLQEPAVFEKLVNGAGPMQQERLTHYLDLVEVSLLGQISARSDAFLEGLETTHALRKVVSQACTSVQQLRAAMARIESEVVTKAIRVPQLAQRQQNLMSLQGYLELVQSIERSKLAVEPLLAADDYSGALDVLEGARRALARDLSDMHCLR 388          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: A0A7S2BIV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BIV8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.720e-32
Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 0
Query:    7 FSLEDPAVFESAIMSVGTDQPERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHVTSYGLNEHTIT 171
            FSL +P +FE  +     ++ E+L  YLDLVEVCLL+QIS R ++FFE L   QDLQ  V  ACT +  LR  ++ MQQ++++G M+VPQL RR+ NL +L + LEQV  V +++ AV+AL  AED+ GAL IL  A++     L  ++ + HV    L E+ ++
Sbjct:    3 FSLAEPIIFEKVVSDSPPERQEQLTQYLDLVEVCLLRQISSRQDSFFEALSNLQDLQLDVTQACTKVNTLRRGVRGMQQNMVSGTMKVPQLARRKSNLNALHSVLEQVLKVLEAKDAVEALFKAEDFAGALSILTEARKMTSESLHNVRCV-HVLDKQLMEYELS 166          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: W7U392_9STRA (Vacuolar protein sorting-associated protein 54 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U392_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.140e-26
Identity = 71/190 (37.37%), Postives = 107/190 (56.32%), Query Frame = 0
Query:    1 MFFDQRFSLEDPAVFESAIMSVGTDQPERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHVTSYGLNEHTITIDPRSFPDLHDPCRHRASP 190
            +FF + F L +PA+F+  ++    D  ERL+ YLD+VE CLLKQIS RS  FFE L T QD++  +A AC  + +LR  +  + Q  + G +R+P+L +R+ NLA+L   L  +  VQ+S   VQ+LL A D+LGALD+L+  +                   GL+EH+    P   P+L +  + +  P
Sbjct:   46 IFFHRDFQLSEPALFDRVVIRATPDTQERLSQYLDVVETCLLKQISSRSQHFFEALITLQDVRDRLAQACGQVLRLRSGLHDIDQKTVRGMIRIPRLAQRKVNLAALLEKLRLLQDVQRSTTLVQSLLGAGDFLGALDVLEDGQ-------------------GLSEHSCVRLPLQQPELDEALKAQLVP 216          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: L8GXG3_ACACA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GXG3_ACACA)

HSP 1 Score: 109 bits (272), Expect = 3.310e-23
Identity = 65/176 (36.93%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    1 MFFDQRFSLEDPAVFESAIMSVGTDQP----ERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHVTSYGLNEHTITI 172
            ++F + FSL DP  FE    ++G+  P    E+L+HYLD+VEV L++Q+S RS +FF  L T QDL   VA  CT +  +R ++  +        + +  L+RRR N   +   L+ +A V+ +Q  +Q LL+  D+ GALD++ + +  + +DL  +QS KH TS  L E T  I
Sbjct:  112 VYFQEDFSLSDPETFEQTCHALGSSSPVLLQEKLSHYLDVVEVELVRQVSMRSGSFFTALTTLQDLHHEVASTCTAISSVRHSLGTVSDAQAKKALNIVALRRRRQNCIVVYKKLKLIARVRAAQPTIQLLLSNSDFAGALDLIATTQAILASDLQGIQSFKH-TSLQLKEMTTLI 286          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: S4RLY6_PETMA (Vacuolar protein sorting-associated protein 54 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=S4RLY6_PETMA)

HSP 1 Score: 101 bits (251), Expect = 1.880e-20
Identity = 66/184 (35.87%), Postives = 102/184 (55.43%), Query Frame = 0
Query:    1 MFFDQRFSLEDPAVFESAI---------MSVGTDQP-------------ERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHVTS 162
            MF    F+LEDPA F + +           VG                 E+L+HYLD+VEV L +QIS RS+AFF+ +++ +D+Q H+  A  T+  LR  + R+   + +G +RV +L   R N ASL   L+ +A VQQ+Q  VQ LL+  +Y GALD++ + +  +Q +L  + S +H+ S
Sbjct:  114 MFLKPDFALEDPATFNTVLPWSQFGGAQQRVGARNAPAVPDGFSSRLLQEKLSHYLDVVEVNLARQISLRSDAFFQAMESQRDVQEHLRRAALTVRSLRSLVGRVDTVLASGSLRVLRLATARRNAASLHGKLKLMAAVQQTQPTVQLLLSTAEYSGALDLIATTQEVLQQELQGVHSFRHLGS 297          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: A0A485KTS7_9STRA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTS7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.570e-19
Identity = 58/172 (33.72%), Postives = 96/172 (55.81%), Query Frame = 0
Query:    1 MFFDQRFSLEDPAVFESAIMSVGT---DQPERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHVTSYGLNEHT 169
            +FF   + L DPA F+  + S G    D  + L+HYLD VEV LL+Q+S RS+ FFE   +  +++  V  AC  +  LR  M R++  +    + + QL R++  L  L+  + Q+  ++ ++++V+AL+   DY GALD++ +A +T+Q   G    +  V S G   HT
Sbjct:  171 LFFKAEYELTDPATFDQVVGSGGVSLQDTQDTLSHYLDRVEVSLLRQVSSRSDRFFEASSSQGEMKKRVTQACDQVKHLRTTMDRLRNSLADKSLAILQLHRKQKRLVELQDLMVQIEEMKHTESSVEALVHGHDYTGALDVIDTALKTIQGMAG----IHCVRSLGEKLHT 338          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: A0A2P6MXG2_9EUKA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MXG2_9EUKA)

HSP 1 Score: 98.6 bits (244), Expect = 1.590e-19
Identity = 59/164 (35.98%), Postives = 94/164 (57.32%), Query Frame = 0
Query:    2 FFDQRFSLEDPAVFESAIMSVGTDQP-----ERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHV 160
            +F + F LED  +F  +  +   D       E+LAHYLD+ EV L+KQIS RS +FF  L   Q+L + V   C  + +LR  +  ++  V+    +VP+L  +R+NL  L+  L+ V  V ++Q  +Q LLA  D+ GAL+++ S +  +Q +L  + SLKH+
Sbjct:  112 YFRENFVLEDEPIFTVSTTTPEDDASPILLQEKLAHYLDVAEVELIKQISYRSESFFSALSDLQNLHSEVQKTCDKIEKLRRQLAELESSVIDKDRQVPKLFTQRNNLIILKKKLKLVHTVSRAQPTIQLLLANSDFAGALELIHSTQSVLQEELSGITSLKHM 275          
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Match: A0A6P8EU21_CLUHA (Vacuolar protein sorting-associated protein 54 n=10 Tax=Clupeidae TaxID=55118 RepID=A0A6P8EU21_CLUHA)

HSP 1 Score: 95.9 bits (237), Expect = 1.330e-18
Identity = 57/170 (33.53%), Postives = 93/170 (54.71%), Query Frame = 0
Query:    7 FSLEDPAVFESAI----MSVGTDQ----------PERLAHYLDLVEVCLLKQISQRSNAFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRRRDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQNDLGKLQSLKHVTS 162
            F L DP  F + +     SV + +           E+L+HYLD+VEVC+ +QIS RS AFF  + +  +LQ  +      + +LR  M  M++ + AGP+R  Q    R N   L + L+ +A V Q+Q  VQ LL+  +++GAL+++ + K  +Q +L  + S +H+ S
Sbjct:  177 FVLNDPVTFNAVLPWSHFSVASGKNRDASSSRLLQEKLSHYLDVVEVCIARQISLRSEAFFHAMSSQHELQDRLQKTTHAVAKLRSRMANMERVMCAGPLRALQQTLTRSNCVRLHSKLKLMAAVHQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGS 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13966.2421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH6_9PHAE1.030e-7380.00Vps54_N domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0A0_ECTSI1.670e-7180.00Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A835YJU9_9STRA1.460e-3550.32Vacuolar protein sorting-associated protein 54 (Fr... [more]
A0A7S2BIV8_9STRA4.720e-3244.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7U392_9STRA2.140e-2637.37Vacuolar protein sorting-associated protein 54 n=2... [more]
L8GXG3_ACACA3.310e-2336.93Vacuolar protein sorting-associated protein 54 n=1... [more]
S4RLY6_PETMA1.880e-2035.87Vacuolar protein sorting-associated protein 54 n=3... [more]
A0A485KTS7_9STRA1.570e-1933.72Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A2P6MXG2_9EUKA1.590e-1935.98Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A6P8EU21_CLUHA1.330e-1833.53Vacuolar protein sorting-associated protein 54 n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019515Vacuolar protein sorting-associated protein 54, N-terminalPFAMPF10475Vps54_Ncoord: 27..149
e-value: 9.6E-11
score: 41.5
IPR039745Vacuolar protein sorting-associated protein 54PANTHERPTHR12965VACUOLAR PROTEIN SORTING 54coord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13966contigH-paniculata_contig13966:1382..6634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13966.2421.1mRNA_H-paniculata_contig13966.2421.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13966 1291..6793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13966.2421.1 ID=prot_H-paniculata_contig13966.2421.1|Name=mRNA_H-paniculata_contig13966.2421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp
MFFDQRFSLEDPAVFESAIMSVGTDQPERLAHYLDLVEVCLLKQISQRSN
AFFEGLKTSQDLQTHVAGACTTLYQLRENMQRMQQDVLAGPMRVPQLQRR
RDNLASLETTLEQVAGVQQSQAAVQALLAAEDYLGALDILQSAKRTVQND
LGKLQSLKHVTSYGLNEHTITIDPRSFPDLHDPCRHRASPGGLEFTRFRV
CHGSGASGSVLSAHPALDVFVEHAMRSQGCLTAVRPPGMRTVSVLPPSSS
FPGTCCHGGTCSRRASTPLVAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019515VPS54_N
IPR039745Vps54