mRNA_H-paniculata_contig13961.2420.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.740e-52 Identity = 145/419 (34.61%), Postives = 214/419 (51.07%), Query Frame = 3
Query: 156 IVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTWW------EVEGKS-KFLNETWEDLHFDGNFTYGEAKSRYRVDE-NCSGNDDG--KAYKGDILTTWWWSTFDRGDDGDDLSFSFH---VDEEVKKTLKTLECEKNDLKGNGTIGIA--------EGEVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVWANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTTGGECVKLLRTYNW--RETHDKHAGLNRSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFD 1343
I + F V+ Y+LHPLV +Y ++RA + + R VEVT S EIL GR WDA RI VL +F AS E+ LDL ++ Y PPPV + + N W E+ G+ K+ +W DL N + EAKS Y V+ S DG K GDI+ W L+F F + ++ T E D +G + A + E WG +EC P L +G+ A P IILT+ N T +++EE + SFLYSVW ++ E +++ FHIAST R+ EA++TGIVL +TGG C +LR ++ D++ + ++LPFGE+P V ++ +VE I G+ + A +C + VL ++VVG +WA+++ STG +I+D
Sbjct: 37 ISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGR-GVWDATRIVTVLLVVFNVASWVLELMLDLYSFEN-EAYPLTQPPPVYRENIQGNASWQVLNLDEINGEDRKYDGSSWFDLP---NVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAI-----AGSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWK-----TNGESVNLSYAFHIASTVRLAEAVVTGIVLGESTGGGCFGMLRAFSRGPNPPEDEYGEMIKALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYD 440
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI) HSP 1 Score: 200 bits (508), Expect = 2.740e-50 Identity = 145/450 (32.22%), Postives = 225/450 (50.00%), Query Frame = 3
Query: 168 FFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTWW------EVEGKSKFLNETWEDLHFDGNFTYGEAKSRYRVDE---NCSGNDDGKAYKGDILTTWWWSTFDRGDDGDDLSFSF--------HVDEEVKKTLKTLECEKND--LKGNGTIGIA--EGEVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVWANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTTGGECVKLLRTYNW--RETHDKHAGLN-RSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFDLAEIVKIMVGNTSDSGINFRGEEA-VRIFVHQEE 1442
F + Y LHPLV +Y ++RA + + K R VEVT S EIL GR WDA RI VL +F AS G E+ LD + P PV + +NN W E+ G+ + N +W DL N + EAKS Y V+ + + K G+I+ W + LSFSF + + ++ + C + LK + E WG +EC A P L +G A P IILT+ N T +++EE + SFLYSVW ++ + + + FHIAST R+ EA++TGIVL ++GG C +LR ++ D++A + ++LPFGE+P V ++ +VE I G+ + A C + VL ++VVG +WA+++ STG +I+D E+++ + ++ + + +RIFV +E+
Sbjct: 41 FIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGR-GVWDATRIVTVLLVVFNVASWGLELMLDQYS-HENEACPLTQPSPVYRKDLDNNARWQVLNLDEINGEDRDYNGSWLDLP---NVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAI-----AESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWK-----TNGDSVTLTYAFHIASTVRLAEAVVTGIVLGESSGGGCFGMLRAFSRGPEPPEDEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRRED 475
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI) HSP 1 Score: 185 bits (470), Expect = 4.040e-46 Identity = 151/489 (30.88%), Postives = 240/489 (49.08%), Query Frame = 3
Query: 54 SVRQPLGDTTVAMTLIEREDDDFLINVSDKEGLTIVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTW---WEVEGKSKF---LNETWEDL-HFDGNFTYGEAKSRYRVDENCSGNDDGKAYK-----GDILTTWWWSTFDRGDDGDDLSFSFHVDEEVKKTLKTLECEKNDLKGNGTIGIAEGEVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVWANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTTGGECVKLLRTYNWRETHDKHA-GLNRSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFDLAEIVKIMVGNTSDSGINFRGEEAVRIFVHQEE-GEMVVTLEEGED 1478
S+ LGD T + L + D LTI F ++ Y LHP + ++ ++RA + + K + VEVT +L AE+ G R WD+ R AV+ A+F AS G E+S+DL ++ G + PPPV N+T W+V S N W L H + T+ A SRY + ++ + GK K G+IL W DD L + + + +LEC LK + + + ++WG+ ++C P G ++ P ++LT + +++EE S+ P+FLYSVW T + +++ FH+ ST R+VEA+ITGIV T GG C LLR ++ ET ++ GL+R+ PFGE P V V ++E I GV + A C LWV+ + V +W + ++ S G +++D E+++ + S A+RIFV +E+ G + V + + D
Sbjct: 3 SLSNLLGDKTWVLPLADGFDGT----------LTIGWTFVLLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVF-GGRGSWDSARNIAVILAVFSLASWGLELSMDLASLE-GEADLLNRPPPVFLRPETNDTNTDPWQVLTLSDIDPDYNGNWRGLEHLNVEDTH--ANSRYYIVKDTR-DYLGKTAKDTFINGEILVASW-------DDKPSLFYDING-----ANVDSLECSGETLK-DAEVYLGT-DLWGNALDCERGPRPT-GLTTSPPAVVLTNGDSGLVSVIVEESSSYPTFLYSVW----TAEGSDSVELAYLFHVHSTVRLVEAVITGIVHGETEGGACFGLLRVFS--ETRVEYEDGLDRASPFGEIPTGDTV-LVQDLETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRREDSGHITVFINDSHD 454
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI) HSP 1 Score: 188 bits (478), Expect = 4.510e-46 Identity = 137/430 (31.86%), Postives = 209/430 (48.60%), Query Frame = 3
Query: 150 LTIVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTW---WEVEGKSKFLNETWEDLHFDGNF--------TYGEAKSRYRVDENCSGNDDGKAYKGDILTTWWWSTF-DRGDDGDDLSFSFHVDEEVKKTL---------KTLECEKNDLKGNGTIGIAEG----EVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVW---ANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTTGG--ECVKLLRTYN-WRETHD-KHAGLNRSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFD 1343
L I + F + YILHP + +Y+++RA + K + V+VT + +E+ GR +WDA R+ +L F AS E+S+DL VD+ P + PPPV + N+ W V LN T D + GN+ T+ AKSRY V + T + WS DR DG+ + S+ +E+ + + C N + + T+ E WG+ +EC P + +GT + P+IILT G T +++EE S PSFLYSVW + T + D ++I FHIAST R+ EA++TGIV V GG C LLR Y+ +T + + G ++ PFGE P V+ +N VE I GV++ A F+W+L++S +G ++ +I+D
Sbjct: 24 LAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGR-GRWDAARVITLLLLAFSLASWILELSMDLNPVDN-PAHLLTQPPPVFKWDAENDNGEVPWHV------LNLTEIDSEYQGNWWKLPNVFETF--AKSRYYVQND---------------TYYAWSKRKDRYIDGEIIVASWSPEEKPDSLIYGQSATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAGGGGGACFGLLRAYSKGSDTPEFEEYGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYD 428
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.190e-42 Identity = 122/443 (27.54%), Postives = 211/443 (47.63%), Query Frame = 3
Query: 135 SDKEGLTIVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSR-----NNNTWWEVEGKSKFLNETWEDLHFDGNFTYGEAKSRYRVDENCSGNDDGKAYKGDILTTWWWSTFDRGDDGDDLSFSFHVDEEVKKTLKTLECEKNDLKGNGTIGIAEGEVWGSFMECTASPPLLHGTIS--AAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVWANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTTGGECVKLLRTYNWRETHDKHAGLNRSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFDLAEIVKIMVGNTSDSGINFRGEE-AVRIFVHQE 1439
SD +I + +++ +LHP+V + +IRA + K RPVEVT ++ +E L G R +WD R+ +L A F ++ G E+SLDL DGPV + PPP++ ++ +N + W V + + E H G G A + YR+ E+ +G+ + W R G F+ + + + + C G+ I E WG EC + P L++ + + A+P +IL +L++EE+S+ PSFLYSVW + + F+++ST R+VEAI++G GG C+ +L ++ + G R PFGE P S V +++ VE I+ GV+V + C + +++V+ L +++D ++++ + + SG G+ A++I+V QE
Sbjct: 9 SDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEAL-GDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESI--------IRGNTVFASWSPQSSRIASG-----LFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWVPGEVKPQEA--QLNHAFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAI---SLPSGEGADGKPVALKIYVRQE 432
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI) HSP 1 Score: 173 bits (438), Expect = 9.840e-41 Identity = 134/472 (28.39%), Postives = 220/472 (46.61%), Query Frame = 3
Query: 135 SDKEGLTIVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTW--WEVEGKSKFLNETWEDLHFDGNFTYGEAKSRYRVD---ENCSGNDDGKAYKGDILTTWWWSTFDRGDDGDDLSFSFHVDEEVKKTLKTLECEKNDLKGNGTIGIAEGEVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVWANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTTGGECVKLLRTYNWRETHDKHAGLN-------RSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFDLAEIVKIMVGNTSDSGINFRGEEAVRIFVHQEEG---EMVVTLEEGEDTFSIGFLLR 1505
+ + I + F + Y LHP + +Y+++RA + + K + V+VT + +E+ GR KWDA R +L A F S E+SL++ V+ G + P P+ ++ + W +E + W DL N +AKS Y V E+ G+I+ W D D + T+ ++ C+ G + + + WGSF+ C PL S+ P IIL + G V+ +V EE PSFLYSVW T S + ++ FHI+ST R+ EA++TGIV T GG C LLRT+N D G++ R+ PFGE P V+ + +VE I GV++ A F+ +L++S+VG W++ ++ S +++D E+++ + + +RI+V +E G +V++ + + FLLR
Sbjct: 20 TQEPTFAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGR-GKWDAARAVTLLLAAFSLGSWVLELSLEIDHVEGG-ARLLNLPVPIYLVNQTSLAWQVMPLEEINPEYGRAWRDLD---NMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASW-------DPDDKHRAGLYYGSNHTATVDSITCKGT----GGDVYLYDEAAWGSFLWC-GEGPLAENKTSSQPVIILEKSEGEVSVIV-EEVGTHPSFLYSVW----TAGSADSKELAYSFHISSTVRLAEAVVTGIVNGETGGGPCFGLLRTFN--AGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKERGGELNVVISASDDDQNGCARFLLR 467
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE) HSP 1 Score: 155 bits (391), Expect = 3.040e-35 Identity = 146/485 (30.10%), Postives = 224/485 (46.19%), Query Frame = 3
Query: 150 LTIVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTW--WEVEGKSKFLNETWEDLHFDGNFTYGEAKSRYRVDE--NCSGNDDGKAY-KGDILTTWWWSTFDRGDDGDDLSFSFHVDEEVKKTL-------KTLECEKNDLKGNGTIGIAEGEVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVW----ANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTT--GGECVKLLRTYNWR--ETHDKHA--GLNRSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFDLAEIVKIMVGNTSDSGI--NFRGEEAVRIFVHQEEGE--MVVTLEEGEDTFS--IGFLLRHGARI 1520
L I + + + Y++HP +Y ++RA + + + V+VT E LLG + D R+ A+L LF A E+S+D V P Y PPPV Q S N+T W V ++ E D N AKSRY V E N ++ Y GDI+ W R D+L + + V +T + + N T GI E WG+ +EC P ++ ++ P+IILT R T +++EE S+ PSFLYSVW A+ + + ++I FHI+ST R+ EA++T IV V GG C LLR YN +T D A G ++ PFGE P+ + + ++E II GV + F V+ +S +G L + P +I++ E+++ N G+ + A+RI V +E+ + +T+ E + S FLLR G +
Sbjct: 22 LVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWME-LLGGCARRDTARVVALLLLLFALALWYLELSIDWFPVSV-PAYSQTLPPPVFQWSAGNSTPTPWHVLSLNEIAPEYEGDWLNQPNVFETVAKSRYYVKEYKNYPWSEPKDRYINGDIIVANW----SRNTKPDNLVYGENATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEE---WGTVLECDQGPAVVEVIGNSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGGACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRAT--NLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCARFLLRRGPEV 495
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI) HSP 1 Score: 150 bits (378), Expect = 6.480e-34 Identity = 130/433 (30.02%), Postives = 201/433 (46.42%), Query Frame = 3
Query: 150 LTIVVCFFVITYILHPLVNMSYRQIRAVQGELYLAKDRPVEVTPLSLPAEILLGRRNKWDAIRIAAVLSALFIAASCGAEMSLDLTEVDDGPVYRFDCPPPVIQSSRNNNTW--WEVEGKSKFLNETWEDLHFDGNFTYGEAKSRYRVDE--NCSGNDDGKAY-KGDILTTWWWSTFDRGDDGDDLSFSFHVDEEVKKTLKTLECEKND-------------LKGNGTIGIAEGEVWGSFMECTASPPLLHGTISAAPTIILTRRIGNVTFLVMEEKSNLPSFLYSVW----ANDFTTSSDEGIDIKQKFHIASTARIVEAIITGIVLNVTT--GGECVKLLRTYNWRETHDK-----HAGLNRSLPFGESPMYSCVNQVNNVEYIIRGVIVRPFASACFLWVLIVSVVGGIWALHVKPSTGTNIFDLAEIVK 1361
L I + + + Y++HP +Y ++RA + + + V+VT E LLG + D R+ A+L LF AS ++S+D+ V + P Y P V + +N+T W V ++ E D N AKSRY V E N ++ Y GDI+ W R D+L + E + + C LK NGT I EVWG+ +EC P + S+ P+IILT R T +++EE S+ PSFLYSVW A+ + + ++I FHI+ST R+ EA++T IV V GG C LLR YN R +D G +++PFGE P+ +N + + E+II GV + F V+ +S G + L + P ++++ E+++
Sbjct: 22 LVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWME-LLGNCGRRDTARVVALLLLLFALASWILDLSIDVFPVPN-PAYSQTLAPQVFKWPASNSTGASWHVLSLTEIDQEYEGDWLNQPNVFETVAKSRYYVKEYKNYVWSEPKDRYINGDIIVANW----SRNTKPDNLVYG----ERATVMVDGITCSSGGEADIFTDDPIPVTLK-NGTDAI---EVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGGACFGLLRAYN-RGPYDTVDFSDSYGKQKAMPFGEDPVSHYINSLKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLR 439 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13961.2420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13961.2420.1 >prot_H-paniculata_contig13961.2420.1 ID=prot_H-paniculata_contig13961.2420.1|Name=mRNA_H-paniculata_contig13961.2420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=677bp MTLIEREDDDFLINVSDKEGLTIVVCFFVITYILHPLVNMSYRQIRAVQGback to top mRNA from alignment at H-paniculata_contig13961:1870..6905+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13961.2420.1 ID=mRNA_H-paniculata_contig13961.2420.1|Name=mRNA_H-paniculata_contig13961.2420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5036bp|location=Sequence derived from alignment at H-paniculata_contig13961:1870..6905+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13961:1870..6905+ >mRNA_H-paniculata_contig13961.2420.1 ID=mRNA_H-paniculata_contig13961.2420.1|Name=mRNA_H-paniculata_contig13961.2420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4062bp|location=Sequence derived from alignment at H-paniculata_contig13961:1870..6905+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |