prot_H-paniculata_contig1396.2419.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1396.2419.1
Unique Nameprot_H-paniculata_contig1396.2419.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length545
Homology
BLAST of mRNA_H-paniculata_contig1396.2419.1 vs. uniprot
Match: D8LBI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI1_ECTSI)

HSP 1 Score: 495 bits (1275), Expect = 6.920e-168
Identity = 303/536 (56.53%), Postives = 366/536 (68.28%), Query Frame = 0
Query:    1 MLRNGVMRVAALAQAQRTIGGGI------AAETKAWISSGKGGNE---DNPTPAETKLAFESTDYGKDPASGAELTPAQIAAAEQLKKRAAVSPTSSAATAFPKGNDPRAMFDSLLSQQADDGKASDTIKREVASDTPDTTRVTFRASAYGKDPQAGAALSEKDAAEIEAMRGRLTK---SPAGAAPVHDSRNMFDSDLTQGGGSAPAADSIKRDVVADTPDATRVVFRASAYGKDPQNAAVLSDQDLAEVEAMQNKLS-KAAAAAAPIHDKRNMFDSDLTQSAGSTRPADSIKRDVATDTPDGTRVAFRAMDYGKDPHAARELPREEAAEVEAMKRRVCKA---SADTAPVHDSRSMFDSDLVHGAGSTPLSDSIKRKVSADTPEETRLVFGGSDYGKDPALMAHSAEKQAEIDALAAKAMRRAAADRAGSVAPIHHPRSMFDSDLTQGAGMVRGSDAINREVAAGTPEVTRLAFGGSDYGKDPRSMQRTTEEQAAMDDLAVRAKVA--AARFSKAPVHH-ERSMFDSVLTQGGN 517
            MLR G+ RVA  A++Q+T   G+      AA T+AW+S+  GG+    D+ TP +TKLAF S+ YGKDPASG E T  + AAA QLK+ A        A A P  +D R MFDS LSQQA+DGK S +IKR+VA+DTPD TRV F A+AYGKDP+A AALS ++A E+EA+R R      + A AAP+HD RNMFDSDLTQG GS  A D+IKRDV  DTPDATRV FRASAYGKDPQ AA LS+Q+ AEVEA++ +   + AAAAAP+HD R+MFDSDLTQ AGST+ +DSIKR+V+ DTPD TRVAFRA  YGKD  AA  L  +EAAEV+ ++ R   A   SAD APVHDSRSMFDSDL  GAG+   SDSIKR V+A+TPE TRLVF GSDYGKDP  + +S +K+AEI ALA    R  A   A + APIHH RSMFDSDL +GAG  R S AI R V   TP +TRL+F GS YG D     +    QA  +     AK+A   A    A VH+ E++M D   +Q G+
Sbjct:    1 MLRRGIFRVAVYARSQKTCAAGVKNLPAAAAGTRAWLSATSGGDSSDSDDVTPPKTKLAFSSSVYGKDPASGGEPTAEEAAAAAQLKREAEAGTAREGAAAAPV-HDNRNMFDSSLSQQAEDGKESGSIKRDVAADTPDATRVAFGATAYGKDPEAAAALSAQEAEEVEALRARAKGDGVAGAAAAPLHDRRNMFDSDLTQGAGSTQAFDAIKRDVKTDTPDATRVAFRASAYGKDPQTAAALSEQEAAEVEALRMRAQGRGAAAAAPVHDSRSMFDSDLTQGAGSTQGSDSIKREVSGDTPDATRVAFRASVYGKDGQAAAALSEQEAAEVDELRVRAHGAGASSADAAPVHDSRSMFDSDLTQGAGAMQGSDSIKRHVAANTPEATRLVFAGSDYGKDPRSVDNSEKKKAEIAALAE---RVGAGTPAAAAAPIHHDRSMFDSDLAEGAGAARESTAIKRHVETATPALTRLSFFGSTYGDDDPGSNKADHAQALAEKQKKGAKLARVGAGVQSAKVHNTEKAMADDEYSQAGS 532          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1396.2419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBI1_ECTSI6.920e-16856.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1396contigH-paniculata_contig1396:23988..25622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1396.2419.1mRNA_H-paniculata_contig1396.2419.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1396 23295..25622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1396.2419.1 ID=prot_H-paniculata_contig1396.2419.1|Name=mRNA_H-paniculata_contig1396.2419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=545bp
MLRNGVMRVAALAQAQRTIGGGIAAETKAWISSGKGGNEDNPTPAETKLA
FESTDYGKDPASGAELTPAQIAAAEQLKKRAAVSPTSSAATAFPKGNDPR
AMFDSLLSQQADDGKASDTIKREVASDTPDTTRVTFRASAYGKDPQAGAA
LSEKDAAEIEAMRGRLTKSPAGAAPVHDSRNMFDSDLTQGGGSAPAADSI
KRDVVADTPDATRVVFRASAYGKDPQNAAVLSDQDLAEVEAMQNKLSKAA
AAAAPIHDKRNMFDSDLTQSAGSTRPADSIKRDVATDTPDGTRVAFRAMD
YGKDPHAARELPREEAAEVEAMKRRVCKASADTAPVHDSRSMFDSDLVHG
AGSTPLSDSIKRKVSADTPEETRLVFGGSDYGKDPALMAHSAEKQAEIDA
LAAKAMRRAAADRAGSVAPIHHPRSMFDSDLTQGAGMVRGSDAINREVAA
GTPEVTRLAFGGSDYGKDPRSMQRTTEEQAAMDDLAVRAKVAAARFSKAP
VHHERSMFDSVLTQGGNSIKDSAGIKREVVADTPELTRLSFFGST
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