mRNA_H-paniculata_contig13956.2417.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13956.2417.1
Unique NamemRNA_H-paniculata_contig13956.2417.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: D7FLN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN7_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.760e-79
Identity = 163/358 (45.53%), Postives = 218/358 (60.89%), Query Frame = 1 
Query:    4 VHMLPESSETLDDLWGGAVPWGGMICSLGFLLILCIDQAISITSA-NRKGKLGGVHSLLHMQD-TPDGHANHGIFESMGGPS--DSYSRDFTEVMNSISPHALLGSTTEMEQSSSLIQQPSSPSLRTSATHDDSPTLRIKDSNGSYSACSMPACQTGNASGGDGSCKWGNDSPTGRSRGREYSINNGVGGHACGGGAXXXHTGHSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGFVLSAGAGLLVG 1065
            VHMLPESSETL+D WG   PW G +CS GFLL+L IDQ +SI+ A ++KG+ GG HSL+  +  + +G  + G  + + G S  ++ S D  EVM +ISP ALLG +   +   +++        R   T+DD                                                   ++G G H  G         H+HG+G  GDGV  RLALLLALSVHSVMEGLG+GA ++KA++LLFAI +HKG+A YALG +LLQ+G+   ++  Y++ FSAMTP GIL+GA+I+Q+ +N + GAVCVALAAGTFL+VSLMEVLPPEL STE+GWSK+G L+ GF+++ G G LVG
Sbjct:   64 VHMLPESSETLNDAWGDVFPWAGFLCSFGFLLVLFIDQGVSISHARSKKGRKGG-HSLVPTEPPSAEGLNSFGQGQGVNGGSHRNTDSEDLAEVMAAISPKALLGYSAMGDSEEAVV--------RGGHTNDD---------------------------------------------------HSGDGDHLRGA--------HAHGLGEEGDGVWVRLALLLALSVHSVMEGLGVGAEATKAYDLLFAIGVHKGIAGYALGAALLQSGVHAKQVTLYILAFSAMTPLGILIGAIIQQDADNDSGGAVCVALAAGTFLYVSLMEVLPPELASTENGWSKMGSLVLGFLVATGVGWLVG 353
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: D7FLN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN8_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 2.460e-73
Identity = 167/359 (46.52%), Postives = 213/359 (59.33%), Query Frame = 1 
Query:    4 VHMLPESSETLDDLWGGAVPWGGMICSLGFLLILCIDQAISITSANR-KGKLGGVHSLLHMQDTPDGHANH-GIFESMGGPS--DSYSRDFTEV-MNSISPHALLGSTTEMEQSSSLIQQPSSPSLRTSATHDDSPTLRIKDSNGSYSACSMPACQTGNASGGDGSCKWGNDSPTGRSRGREYSINNGVGGHACGGGAXXXHTGHSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGFVLSAGAGLLVG 1065
            VHMLPESSETL+D WG   PWGG  C+ GFLLILCIDQA+SI+ A R KG+ GG HSL+  +       N  G    + G S  ++ S D  E+ M +ISP ALLGS+   +   ++++   +   R     +                      Q G  S         + S T      + + ++   GHA                             LLALSVHSVMEGLG+GA+++KA+NLLFAI +HKGLAAYALG SLLQ+G+ G ++  +V+ FSAMTP GILLGALIE++GE+ + GAVCVALAAGTFL+VSLMEVLPPEL STE+GWSK+G L+ GFV+SAG G LVG
Sbjct:   62 VHMLPESSETLNDAWGDVFPWGGYFCAFGFLLILCIDQAVSISHARRRKGRKGG-HSLVPTEPPSVDDLNRFGQRRGINGGSHRNTDSEDLAELEMAAISPKALLGSSAMGDSHEAVVRGGGTNGDRNGNGGEAGGAXXXXXXXXXXXXXXXXCPQQGLIS---------SPSSTDSHGDEDCADHHXXXGHAX-----------XXXXXXXXXXXXXXXXXLLALSVHSVMEGLGVGAKTTKAYNLLFAIGVHKGLAAYALGASLLQSGVYGKQVTLFVIAFSAMTPLGILLGALIEKDGEDDSGGAVCVALAAGTFLYVSLMEVLPPELASTENGWSKMGSLVLGFVVSAGVGWLVG 399
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BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: A0A662Y4D4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.940e-29
Identity = 68/140 (48.57%), Postives = 100/140 (71.43%), Query Frame = 1 
Query:  592 HTGHSH-GMGVAGDGVTTRLALLL--ALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIE-QNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHG 999
            H GHSH G G  GD  +  +A++L  ALS HSV+EGLG+GA++  AW + FAI +HKGLAA+ALG+ L+Q+ +  + +M Y+V+FS M+  GI++G +I   + E+ AA  +CVALA+GTF++V++MEV+P E     HG
Sbjct:  167 HAGHSHLGGGAHGDAGSLAVAMVLFIALSFHSVLEGLGIGAQTQSAWGVFFAIVVHKGLAAFALGSGLVQSAMPAAHVMLYMVVFSFMSIIGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHGHG 306
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: A0A225VL60_9STRA (Zinc (Zn2)-Iron (Fe2) Permease (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VL60_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.890e-29
Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:  601 HSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGF 1032
            HSH  G+        L + +ALS HSVMEG+G+GA S+ AW++L AI  HK LAA+AL    L   +   +L+  + +FS MTP GIL G L+  +     AG VC A A GTFLFV++ME++P EL    +   KL  L  G+
Sbjct:    9 HSHIHGIVKGNPILALVVFIALSFHSVMEGMGMGASSTAAWDILVAILAHKSLAAFALALEFLHHNVSRKQLLSSIAVFSLMTPMGILFGRLLVDSNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPRYQVEKLSALFAGY 152
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: W2RI35_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2RI35_PHYPN)

HSP 1 Score: 127 bits (318), Expect = 2.980e-28
Identity = 67/144 (46.53%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:  601 HSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGF 1032
            HSH  G+        L + +ALS HSVMEG+G+GA SS AW++L AI  HK LAA+AL    L   +   +L+  V IFS MTPTGIL G L+        AG VC A A GTFLFV++ME++P EL    +   K   LL G+
Sbjct:  196 HSHIHGIVKGNPILALVVFIALSFHSVMEGMGMGASSSAAWDILVAILAHKSLAAFALALEFLHHNVSRKQLLSTVAIFSLMTPTGILFGRLLVDTNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPRYQIEKCSALLAGY 339
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: G4ZBQ0_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZBQ0_PHYSP)

HSP 1 Score: 127 bits (318), Expect = 3.280e-28
Identity = 66/144 (45.83%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:  601 HSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGF 1032
            HSH  G+        L + +ALS HSVMEG+G+GA SS AW++L AI  HK LAA+AL    L   +   +L+  V +FS MTPTGIL G L+        AG VC A A GTFLFV++ME++P EL    +   K   LL G+
Sbjct:  201 HSHIHGIVKGNPILALVVFIALSFHSVMEGMGMGASSSPAWDILVAILAHKSLAAFALALEFLHHNVSRKQLLSSVAVFSLMTPTGILFGRLLVDTNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPRYQLEKCSALLAGY 344
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: A0A3R7GT88_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GT88_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.310e-28
Identity = 65/142 (45.77%), Postives = 98/142 (69.01%), Query Frame = 1 
Query:  592 HTGHSHGMGVAGD-----GVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIE-QNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHG 999
            H GHSH +G AGD      +   + L +ALS HSV+EGLG+GA++  AW +  AI +HKGLAA+ALG+ L+Q+ +  +++  Y+V+FS M+  GI++G +I   + E+ AA  +CVALA+GTF++V++MEV+P E     HG
Sbjct:  136 HAGHSH-LGGAGDQADAGSLAVAMVLFIALSFHSVLEGLGIGAQTETAWGVFMAIVMHKGLAAFALGSGLVQSAMPVAQVTLYMVVFSFMSIIGIIIGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHG 276
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: G5ABV8_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5ABV8_PHYSP)

HSP 1 Score: 125 bits (313), Expect = 1.080e-27
Identity = 69/155 (44.52%), Postives = 99/155 (63.87%), Query Frame = 1 
Query:  565 ACGGGAXXXHTGHSHGMGVAGDGVTTRLA----LLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIE-QNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLG 1014
            A G      H GHSHG G A +     LA    L +ALS HSV+EGLG+GA++  AW +  AI +HKGLAA+ALG+ L+Q+ +  + +M Y+ +FS M+  GI++G +I   + E+ AA  +CVALA+GTF++V++MEV+P E     HG    G
Sbjct:  152 AAGSNVRRSHAGHSHGPGHADEADAGSLAVAIVLFIALSFHSVLEGLGIGAQTETAWGVFMAIIMHKGLAAFALGSGLVQSAMPVTYVMLYMFVFSFMSIIGIVVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHGGGDEG 306
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: A0A0P1AHW2_PLAHL (Zinc (Zn2 )-iron (Fe2 ) permease family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHW2_PLAHL)

HSP 1 Score: 124 bits (310), Expect = 1.170e-27
Identity = 66/144 (45.83%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:  601 HSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGF 1032
            HSH  G+        L + +ALS HSVMEG+G+GA SS AW++L AI  HK LAA+AL    LQ  +   +L+  + IFS MTP GI  G L+  +     AG VC ALA GTFLFV++ME++P EL        K   LL G+
Sbjct:  144 HSHIHGIVKGNPILALVVFIALSFHSVMEGMGIGASSSPAWDILVAILAHKSLAAFALTLEFLQHNVSKKQLLITITIFSLMTPMGICFGRLLVDSNRATPAGGVCAALAGGTFLFVAIMEIIPQELQDPRFQLEKCTALLAGY 287
[Close]
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Match: M4BMB1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMB1_HYAAE)

HSP 1 Score: 124 bits (312), Expect = 1.850e-27
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 1 
Query:  601 HSHGMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGLAAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAGAVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGF 1032
            H+H  G+        L + +ALS HSVMEG+G+GA S+ AW++L AI  HK LAA+AL   LL   +   +L+  + +FS MTP GIL G L+    +   AG VC ALA GTFLFV++ME++P EL    +   K   LL G+
Sbjct:  196 HAHIHGIVRGNFILALVVFIALSFHSVMEGMGMGASSTPAWDILIAILAHKSLAAFALALELLHHDVPRMQLLSSIAVFSLMTPMGILFGRLLVDTTQATPAGGVCAALAGGTFLFVAIMEIIPRELQDPRYQLEKCSALLAGY 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13956.2417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLN7_ECTSI1.760e-7945.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FLN8_ECTSI2.460e-7346.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662Y4D4_9STRA2.940e-2948.57Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A225VL60_9STRA4.890e-2943.75Zinc (Zn2)-Iron (Fe2) Permease (Fragment) n=1 Tax=... [more]
W2RI35_PHYPN2.980e-2846.53Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
G4ZBQ0_PHYSP3.280e-2845.83Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A3R7GT88_9STRA6.310e-2845.77Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
G5ABV8_PHYSP1.080e-2744.52Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0P1AHW2_PLAHL1.170e-2745.83Zinc (Zn2 )-iron (Fe2 ) permease family n=1 Tax=Pl... [more]
M4BMB1_HYAAE1.850e-2744.44Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13956contigH-paniculata_contig13956:1392..6410 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score267.7
Seed ortholog evalue7.7e-69
Seed eggNOG ortholog2880.D7FLN7
KEGG koko:K14709
KEGG TC2.A.5.1,2.A.5.3,2.A.5.6
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.zinc ion transmembrane transporter activity
EggNOG OGsKOG1558@1,KOG1558@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons5
Model size2153
Cds size1059
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929108.4994824-UTR-H-paniculata_contig13956:1391..24761622929108.4994824-UTR-H-paniculata_contig13956:1391..2476Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13956 1392..2476 -
1691480734.7637386-UTR-H-paniculata_contig13956:1391..24761691480734.7637386-UTR-H-paniculata_contig13956:1391..2476Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13956 1392..2476 -
1622929108.637155-UTR-H-paniculata_contig13956:6401..64101622929108.637155-UTR-H-paniculata_contig13956:6401..6410Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13956 6402..6410 -
1691480734.8311262-UTR-H-paniculata_contig13956:6401..64101691480734.8311262-UTR-H-paniculata_contig13956:6401..6410Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13956 6402..6410 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929108.5196571-CDS-H-paniculata_contig13956:2476..27911622929108.5196571-CDS-H-paniculata_contig13956:2476..2791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 2477..2791 -
1691480734.7747633-CDS-H-paniculata_contig13956:2476..27911691480734.7747633-CDS-H-paniculata_contig13956:2476..2791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 2477..2791 -
1622929108.5371656-CDS-H-paniculata_contig13956:4363..48431622929108.5371656-CDS-H-paniculata_contig13956:4363..4843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 4364..4843 -
1691480734.7861595-CDS-H-paniculata_contig13956:4363..48431691480734.7861595-CDS-H-paniculata_contig13956:4363..4843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 4364..4843 -
1622929108.5527313-CDS-H-paniculata_contig13956:5087..51771622929108.5527313-CDS-H-paniculata_contig13956:5087..5177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 5088..5177 -
1691480734.797284-CDS-H-paniculata_contig13956:5087..51771691480734.797284-CDS-H-paniculata_contig13956:5087..5177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 5088..5177 -
1622929108.5960076-CDS-H-paniculata_contig13956:6006..60901622929108.5960076-CDS-H-paniculata_contig13956:6006..6090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 6007..6090 -
1691480734.8084435-CDS-H-paniculata_contig13956:6006..60901691480734.8084435-CDS-H-paniculata_contig13956:6006..6090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 6007..6090 -
1622929108.6240535-CDS-H-paniculata_contig13956:6311..64011622929108.6240535-CDS-H-paniculata_contig13956:6311..6401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 6312..6401 -
1691480734.8209608-CDS-H-paniculata_contig13956:6311..64011691480734.8209608-CDS-H-paniculata_contig13956:6311..6401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13956 6312..6401 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13956.2417.1prot_H-paniculata_contig13956.2417.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13956 2477..6401 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13956.2417.1

>prot_H-paniculata_contig13956.2417.1 ID=prot_H-paniculata_contig13956.2417.1|Name=mRNA_H-paniculata_contig13956.2417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=353bp
MLPESSETLDDLWGGAVPWGGMICSLGFLLILCIDQAISITSANRKGKLG
GVHSLLHMQDTPDGHANHGIFESMGGPSDSYSRDFTEVMNSISPHALLGS
TTEMEQSSSLIQQPSSPSLRTSATHDDSPTLRIKDSNGSYSACSMPACQT
GNASGGDGSCKWGNDSPTGRSRGREYSINNGVGGHACGGGAGGGHTGHSH
GMGVAGDGVTTRLALLLALSVHSVMEGLGLGARSSKAWNLLFAIFIHKGL
AAYALGTSLLQTGIVGSELMCYVVIFSAMTPTGILLGALIEQNGENGAAG
AVCVALAAGTFLFVSLMEVLPPELCSTEHGWSKLGCLLGGFVLSAGAGLL
VG*
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mRNA from alignment at H-paniculata_contig13956:1392..6410-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13956.2417.1 ID=mRNA_H-paniculata_contig13956.2417.1|Name=mRNA_H-paniculata_contig13956.2417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5019bp|location=Sequence derived from alignment at H-paniculata_contig13956:1392..6410- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTCATATGCTACCGGAAAGCAGCGAAACATTGGATGATCTGTGGGG
CGGTGCTGTTCCCTGGGGAGGGATGATTTGCTCGTTGGGCTTCCTCCTGG
TGAGACACTTGTTTTTGTCAGCAAGTGTCCAAGTGATCTCTTCTCTGTCT
CTTGTGATATGTCTGTGATGTGCATGTGTATATGTGTGTGTGTGTGTGTG
TGTGTGTGTATGTGTGTATGTGTAGGATTCCCCTTGAGTCTGCGTGCCAT
ACTTTTTCATGCCCTGCCTTTTTGTTTGTTTTATTCCCCTCTCTCGTGCC
TTTGATCTTGTCACACTCAGATCCTCTGCATCGACCAAGCGATATCGATA
ACTTCCGCCAACAGGAAGGGAAAGTTGGGTGGCGTTCATTCTTTGCTCCA
CATGGTGAGGACGCACCCTGGTTCCTTGTCTGGAAAGATCAGAAATTGTC
AATATGACACGAAAAAGGCGTTGAGAACGAAGCAAACGGCGATGAAATAC
ACGCTCAGTACCGTGATACTCCCTTTGAAGGTTGTAACTAGTCGAAGAGG
TGCTAGAAGTCCTGCTACTTTGGTCATGATGAAATCAAGGTGTCTGCCAT
ATGATCAATATCCTGTTGAAATGCCAAGTGTGTCCGCTAAACTTGCCTGG
TACTCTTTTGCCATGAGGGTATACCTCCGCCTTCCCGCGAGTATTGATGA
CACAACCATTGTTACACCTGACCCTTGCAAACATGAAATTTGCTTTTTAT
TTTTGCGACGTTTGATTCACAACATGAATAACCTCGCCGAATCGAGCAGG
CAACGGCTATCGCAGCCGGTCTGCGGTGAGTCCTTTTCGCTCCAAGTTCC
ATAGTTGCGATGTCGGCGCTGAACAACTGACTACCCTTCTTTTTCTGTTG
GCCTTTTGTCACATGGGAACGGACGGTATATGTAGCATTGCGAGAAATCA
AACGCATCAACGAGGGTAGCGCCGGCCGTGAAACGTGCGAAGCTCGCCCT
CGTGGTATATAGTTCATATTTTATTTTCCCGTTGCCCCTTTGCGCTTCGA
TCCCCCCGCCCCTGATCGCGCCTTTTTAATTTGACCATCGGCATTTTTTC
GAGGATGCATGGTAGATGCCCTACAGCCAAGACATGCATGAAAAAGCATC
ATTACGTCTTGCCTCTCTTCCCCCTCGCTCATTCCCGCCCACCCCTTTGG
TTTTGTGTCCCAACGATCTCGGTTTCTCTGCAGCAGGACACACCAGACGG
ACACGCCAATCACGGGATCTTTGAGAGTATGGGAGGTCCCTCCGACTCTT
ATTCTAGAGACTTCACAGAAGTTGTAAGTGCTGTTGTAAAGCGTCAAGTT
TGTTGCTCGCTATCGTGTACCAGATATTAGGCAGGGGAGAGCGGTATTCA
ACTTTGTACGTCCAGAACTGTACTAGGACAAGGATGCCCCATGGTAGCTG
TGTAGTGGGGCTGCGTTTTTATTTCGTTCTATACTTTCGCTTGATAGCTT
TCGCCGTATTTAGGCCCCCTTCCCCGCCCCGCTCCCTCCGTCGTCCCTTG
CCGTCTACGCAAAGGAGATGAATAGCATATCACCGCACGCTCTCCTGGGT
TCAACAACAGAGATGGAGCAATCTTCCTCGCTGATTCAGCAGCCGTCTTC
GCCTAGCCTAAGGACGTCGGCGACCCACGATGACTCCCCGACGCTGAGAA
TCAAGGACTCCAACGGCAGCTACTCCGCCTGCAGCATGCCAGCGTGCCAG
ACAGGAAACGCGAGCGGTGGCGACGGCAGCTGCAAGTGGGGCAACGACAG
CCCGACCGGCCGCTCCAGAGGTCGCGAATATTCTATAAACAACGGGGTTG
GTGGTCATGCGTGCGGCGGCGGTGCTGGCGGCGGGCATACTGGACATTCT
CATGGCATGGGCGTGGCCGGAGACGGAGTGACGACCCGCCTTGCCCTGCT
GCTTGCTCTATCGGTGCACTCGGTGATGGAAGGCTTGGGCCTGGGCGCCA
GGTCTAGCAAGGCGTGGAATCTGCTTTTTGCGATCTTCATACATAAGGTA
CACCCTCGGGGGGGGGAGGGGAAGATCATATTGGTTGCATCATGTACAAC
TTACAATGTTCACGACCGTGTATATACCAGGACTTTTCGCACCACTCGGA
TTAGGGACAACATGTAGATCATGACCACTACATTCACCAGAGAACATGAA
TGTGTCATTCGATAGCGTGTGTACTGACTATGCGTAGACATGACATGGCG
TAGAACTAGTGCGTGCTTGGCATATATATCAATTCGACCTACGAGCCCTC
CTAGACCAAGTCAAATCAACCCGCTTTTGTTCCAGAGTAATTTCGTCATA
CCTACGTAATGCCGAGGTAGTTGCAGCTCCACTGAAATCTGAGCTGCGTA
TCCTAATCCGCAGAATTAAATTCAACAGGGGTTCATACCCGCTTTAATCG
TCGCCGTCATTTTTTGGGAGGCATGTGGGAATGGATTGTCGGGGGTGCAC
CACGATACCTCATATCCTGCCGGCCTCTGACAGGTGTTGCTTCCGGAGGC
ACAAAACCTACACATTCATATTCCGCCGTAGAAGTATAAATAGTAGATAC
TATGCCATCCAATCTAGCCGTAACTCAAAGCACTAAATAGGAGTGTCTGG
TAAAGACGGTAGATTCATCGTGTTCCCAGCCATGAGGAATATTCTTTTTC
AATGCCCTCCTCCGTGCGGTAATGAGGTTAGGTAAAACCATTCTTGAAGT
ACATCTGACAATGTAAGAAAGAACGATTGGTGATCGAACATCGCTTTTAT
AGGATCAAAGTTCTGTCCTCCCGAGGACGCGTGGTCAAAGGTCTAACAAG
AACGACATGTGAAACGTGGGTAAGCCCATTCCCCCCCCCTGCCAGCGCGC
GCTCACCCAATGTAGCGCTCTATTCTCTTAAAACGCGTCCTCAATGGTCC
ATCAACTGAGGCATATAAAACATGAGCACGCTCAAAAGTCTGCTTTCAAA
GTGATAAGCACTCTTGGTTTTACCATGAAATTATCCTTGAATGCAGCGCA
GATTAGCAGTTGTTTTGGCAAAGTTCAGGAACATGAATCGAGGTCAATGC
ACTGAAGACGTATCGTATATGGGCGTCAGAACACTGTATCCGCCTTTAGC
CATATATGCCGCGGTCGTTTCTATTGTGGTGTAGACATGTTGCATTATAG
TCGTTATTATTCAAGGGTTTTTTACTTCGTGTTGGAAATAGATGGAAACC
AAAAGTCGTATTTTTTCAGTCAACGGCGAGGCCTCTTCACCGATCAGGGG
AGGGGGCAGACGTTGAGTCCACGATGAAGTGCTCGCCTGGCACTGTGAGC
CACTGGCGCACGTCGCTCGCAATGGTGTCTCGTCGGTATTTTGGTCTGAG
TGACCTATACACAGCCCTCGAAACGTTTGAAGAGTTTACTTTATAAGCTT
GTTAGGGGACTGCACTGACAGGCGACCTCTGGTCTTGATGAATTTACGCG
GCATCGAAAGACAGGGTGCATGGCCTTAACGTGATGAATATGCATGCAAA
TCAACCGACAAATGGTCACAGCCCCCCTCCTCCCCTCTCCCCCTTCATTT
TTTCGCCGTGTACCCTCAGGGTCTAGCTGCGTATGCCCTCGGGACATCTC
TTCTCCAAACGGGCATAGTAGGAAGCGAGCTGATGTGCTACGTTGTGATA
TTTTCGGCGATGACTCCCACGGGAATTCTGCTGGGCGCTCTTATAGAACA
AAATGGGGAGAATGGTGCAGCTGGGGCCGTGTGTGTTGCGCTGGCAGCAG
GAACTTTCTTGTTTGTTTCTTTGATGGAAGTCTTGCCGCCGGAGTTATGC
TCGACGGAGCACGGGTGGTCAAAGCTTGGGTGTCTATTGGGTGGTTTCGT
GCTGTCTGCAGGGGCAGGGCTGTTGGTTGGTTGAAGTATTTCAACATTTC
TCGCACTGTATATATATATATATATATATGTATGTATTTGCATGATGTAA
CTTGCAGTCGTGCACGAGTCAAACTTTAGCTATCGTGGGCCCTTTAACGA
CCTGCGAAAAGGTACACTGGAAGACCGTTTATCATTCTCGGCGCTTGTTT
TTCTGGAGGTTGTGCAGGTATGGTTAGCTGATGTGCATACCGTGGTAGGA
TTATTAATTGCGTCTATATTTGCTCCTAAGCTCTGGTTGTTTCAAATTCT
TATGCCAGATGGAGGAACGAAGTCCTGCTGAGATAGAGTGGCCTTCTTTT
TGCCTTTGGGCTAGGTTCCTCTGGTCAAGGGGACATGTGTCGCTTGTTCC
CACGTTCTAGTGCCTCGGGGCCCTCTGCTTCCTATCACAATCAATGCTCT
TCATTCGCGAGCTCAAGTAATTTTCCTGCGTATTGACTTTGTTTATTTCG
CGAAAACGATAGACAGGTTCGGCAAGCTGGGTTTGTAGTGATTTTCGTTT
CGTTTTTACAAATTTTGTTTTCAATTTCTTGGTGTTGTACCTTTTGCCAG
GTCGTACGCGATTTCTATTGGATTGTTGTCCATCTCACACGGTCCTGTGC
TGGACCGGACTGTGCAATCTTCCGCGCTGCTGCACGAGCGGACCTCTAAA
AAGAGCGTTAGACATAAAGTTCCGACGAAGTCGCTAGTTTTCTTTGGCCA
AAAATGCAAAAAAAGGTCTCGGCGAATTGTGATGTAGTGTCTGTTGAAAT
GAATTTTTCCTCCGGATGTATGTATGTAATGTTTGTAGCTGGTTGAGGCT
TGAGCAGCACGTCGATGCGATCTGTAGAGGAAATCCGTGTTTTTTTGTCC
ATCGCGAAGGAATATATCGAGTAACCGGTCTTGTCTAGGGTGAAACATTT
TATCTGAACATTTTGGAGCGTGCAGACCTGCCTTGCGTTGCGGGGGACGG
GTGGGAACACCCAGAGTATTGAAGATATGGTGCCATGGTGAAGTTGGCGG
TTGGCAAACAAAGCTAACCCATTCTACAGCGTGCACATAATTTGTAATAA
CAAATGCGCTATGAACTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig13956:1392..6410-

>mRNA_H-paniculata_contig13956.2417.1 ID=mRNA_H-paniculata_contig13956.2417.1|Name=mRNA_H-paniculata_contig13956.2417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2118bp|location=Sequence derived from alignment at H-paniculata_contig13956:1392..6410- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTACCGGAAAGCAGCGAAACATTGGATGATCTGTGGGGCGGTGCTGT
TCCCTGGGGAGGGATGATTTGCTCGTTGGGCTTCCTCCTGATGCTACCGG
AAAGCAGCGAAACATTGGATGATCTGTGGGGCGGTGCTGTTCCCTGGGGA
GGGATGATTTGCTCGTTGGGCTTCCTCCTGATCCTCTGCATCGACCAAGC
GATATCGATAACTTCCGCCAACAGGAAGGGAAAGTTGGGTGGCGTTCATT
CTTTGCTCCACATGATCCTCTGCATCGACCAAGCGATATCGATAACTTCC
GCCAACAGGAAGGGAAAGTTGGGTGGCGTTCATTCTTTGCTCCACATGCA
GGACACACCAGACGGACACGCCAATCACGGGATCTTTGAGAGTATGGGAG
GTCCCTCCGACTCTTATTCTAGAGACTTCACAGAAGTTCAGGACACACCA
GACGGACACGCCAATCACGGGATCTTTGAGAGTATGGGAGGTCCCTCCGA
CTCTTATTCTAGAGACTTCACAGAAGTTATGAATAGCATATCACCGCACG
CTCTCCTGGGTTCAACAACAGAGATGGAGCAATCTTCCTCGCTGATTCAG
CAGCCGTCTTCGCCTAGCCTAAGGACGTCGGCGACCCACGATGACTCCCC
GACGCTGAGAATCAAGGACTCCAACGGCAGCTACTCCGCCTGCAGCATGC
CAGCGTGCCAGACAGGAAACGCGAGCGGTGGCGACGGCAGCTGCAAGTGG
GGCAACGACAGCCCGACCGGCCGCTCCAGAGGTCGCGAATATTCTATAAA
CAACGGGGTTGGTGGTCATGCGTGCGGCGGCGGTGCTGGCGGCGGGCATA
CTGGACATTCTCATGGCATGGGCGTGGCCGGAGACGGAGTGACGACCCGC
CTTGCCCTGCTGCTTGCTCTATCGGTGCACTCGGTGATGGAAGGCTTGGG
CCTGGGCGCCAGGTCTAGCAAGGCGTGGAATCTGCTTTTTGCGATCTTCA
TACATAAGATGAATAGCATATCACCGCACGCTCTCCTGGGTTCAACAACA
GAGATGGAGCAATCTTCCTCGCTGATTCAGCAGCCGTCTTCGCCTAGCCT
AAGGACGTCGGCGACCCACGATGACTCCCCGACGCTGAGAATCAAGGACT
CCAACGGCAGCTACTCCGCCTGCAGCATGCCAGCGTGCCAGACAGGAAAC
GCGAGCGGTGGCGACGGCAGCTGCAAGTGGGGCAACGACAGCCCGACCGG
CCGCTCCAGAGGTCGCGAATATTCTATAAACAACGGGGTTGGTGGTCATG
CGTGCGGCGGCGGTGCTGGCGGCGGGCATACTGGACATTCTCATGGCATG
GGCGTGGCCGGAGACGGAGTGACGACCCGCCTTGCCCTGCTGCTTGCTCT
ATCGGTGCACTCGGTGATGGAAGGCTTGGGCCTGGGCGCCAGGTCTAGCA
AGGCGTGGAATCTGCTTTTTGCGATCTTCATACATAAGGGTCTAGCTGCG
TATGCCCTCGGGACATCTCTTCTCCAAACGGGCATAGTAGGAAGCGAGCT
GATGTGCTACGTTGTGATATTTTCGGCGATGACTCCCACGGGAATTCTGC
TGGGCGCTCTTATAGAACAAAATGGGGAGAATGGTGCAGCTGGGGCCGTG
TGTGTTGCGCTGGCAGCAGGAACTTTCTTGTTTGTTTCTTTGATGGAAGT
CTTGCCGCCGGAGTTATGCTCGACGGAGCACGGGTGGTCAAAGCTTGGGT
GTCTATTGGGTGGTTTCGTGCTGTCTGCAGGGGCAGGGCTGTTGGTTGGT
TGAGGTCTAGCTGCGTATGCCCTCGGGACATCTCTTCTCCAAACGGGCAT
AGTAGGAAGCGAGCTGATGTGCTACGTTGTGATATTTTCGGCGATGACTC
CCACGGGAATTCTGCTGGGCGCTCTTATAGAACAAAATGGGGAGAATGGT
GCAGCTGGGGCCGTGTGTGTTGCGCTGGCAGCAGGAACTTTCTTGTTTGT
TTCTTTGATGGAAGTCTTGCCGCCGGAGTTATGCTCGACGGAGCACGGGT
GGTCAAAGCTTGGGTGTCTATTGGGTGGTTTCGTGCTGTCTGCAGGGGCA
GGGCTGTTGGTTGGTTGA
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