mRNA_H-paniculata_contig13943.2413.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE) HSP 1 Score: 234 bits (597), Expect = 3.550e-65 Identity = 101/152 (66.45%), Postives = 120/152 (78.95%), Query Frame = 2
Query: 5 GLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVSTPMLEKASDKKYGGQAAYQEYKRRTPALHFRLW 460
G+WVF T +PMLVLHK+DP+G G++ ++A GL VW TGF LEV+AD QKRAFKAD N GK+IDVGLWSRCRHPNY+GEM +W GFF+FCSRG++ G GW L GP F +L VSTPMLE+ +DKKYGG AAY EYKR TP+L FRLW
Sbjct: 391 GIWVFFTAVPMLVLHKVDPRGSMGNILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALVGPLFGTAILTFVSTPMLEQGADKKYGGHAAYHEYKRTTPSLFFRLW 542
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: D7FIU1_ECTSI (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU1_ECTSI) HSP 1 Score: 196 bits (499), Expect = 3.700e-56 Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 2
Query: 74 GDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVSTPMLEKASDKKYGGQAAYQEYKRRTPALHFRLW 460
G++ ++A GL VW TGF LEV+AD QKRAFKAD N GK+IDVGLWSRCRHPNY+GEM +W GFF+FCSRG++ G GW L GP F +L VSTPMLE+ +DKKYGG AAY EYKR TP+L FRLW
Sbjct: 2 GNILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGTAILTFVSTPMLEEGADKKYGGHAAYHEYKRTTPSLFFRLW 130
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A6L3F972_9CHLR (DUF1295 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F972_9CHLR) HSP 1 Score: 147 bits (370), Expect = 6.610e-36 Identity = 77/153 (50.33%), Postives = 98/153 (64.05%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRTPALHFRL 457
QGLWV LT LV + DLG IG +WI GF +EV+AD QK FKAD +N+GK+I+ GLW+R RHPNY GE+M+W+G V + +L G W L P FV LLL VS PMLEK +D+K+GGQ Y+ YK++TP+L RL
Sbjct: 140 QGLWVTLTLAAALVAITTTNRK---DLGWFALIGFVIWIVGFTIEVVADNQKSRFKADSSNKGKFINTGLWARSRHPNYFGEIMLWIGVAVI-ALPVLQGWQWVALISPVFVTLLLTQVSGIPMLEKRADEKWGGQEDYETYKKQTPSLIPRL 288
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A7W3JLY3_9MICO (Steroid 5-alpha reductase family enzyme n=1 Tax=Microbacterium halimionae TaxID=1526413 RepID=A0A7W3JLY3_9MICO) HSP 1 Score: 147 bits (370), Expect = 7.120e-36 Identity = 74/154 (48.05%), Postives = 95/154 (61.69%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRTPALHFRLW 460
QGLWV LT + G +G A+G+ +W G +E+IAD QK AFKAD NEG +I GLWSR RHPNY GE+++WVG + + +L+G W L P FV+LLL VS P+LE +DK++GGQ AY+ YK RTP L RLW
Sbjct: 140 QGLWVSLTAAAAWIAMSNGSSGA--PIGWVGAVGIAIWALGLAIEIIADAQKTAFKADPDNEGSFIRSGLWSRSRHPNYFGEIVLWVGVAIVAAP-VLSGWQWVALISPIFVVLLLTKVSGVPLLEAKADKRWGGQRAYENYKSRTPVLIPRLW 290
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A061S5I4_9CHLO (S5A_REDUCTASE domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S5I4_9CHLO) HSP 1 Score: 143 bits (361), Expect = 5.640e-35 Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRT 436
QG+WVF+T LP ++ + W L T +A GL +W G L E +AD QK AFK D NEG++I GLWS RHPNY GE+++W G F CS L G P FV+ LL VS P+LE+++DK++G +AAYQEYKRRT
Sbjct: 107 QGVWVFVTLLPSMLAMAAPQRSAW--LWT-DAAGLALWAVGLLTEAVADAQKFAFKMDPKNEGRFITTGLWSLSRHPNYFGEILVWWGTFTVCSSALPAGTAAAASLSPLFVMFLLLRVSGVPILERSADKRWGSEAAYQEYKRRT 249
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A2S5WSD5_9MICO (S5A_REDUCTASE domain-containing protein n=5 Tax=Pseudoclavibacter TaxID=255204 RepID=A0A2S5WSD5_9MICO) HSP 1 Score: 141 bits (356), Expect = 8.160e-34 Identity = 71/153 (46.41%), Postives = 95/153 (62.09%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRTPALHFRL 457
QGLWV LT + E +G +G+ +W+ GF++EV+AD QK AFKAD N+G++I GLWSR RHPNY GE+++WVG + +L G W L P FV+LLL VS P+LE +DKK+GG A Y+EYK +TP L +L
Sbjct: 152 QGLWVSLTAAAAWIAIA-GGTAEREPIGWLGIVGIVIWVAGFVIEVVADLQKNAFKADPANKGRFIRTGLWSRSRHPNYFGEILLWVGVAIVAVP-VLVGWQWIALISPVFVVLLLSKVSGVPLLEAKADKKWGGDADYEEYKAKTPVLLLKL 302
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: UPI001889A211 (DUF1295 domain-containing protein n=1 Tax=Microbacterium aquimaris TaxID=459816 RepID=UPI001889A211) HSP 1 Score: 140 bits (354), Expect = 1.120e-33 Identity = 71/153 (46.41%), Postives = 97/153 (63.40%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRTPALHFRL 457
QG WV LT + + + LG +G+GVW+ G +LEV AD QK AFKAD NEG++I GLWSR RHPNY GE+++W+G F+ + +L+G W + P FVILLL VS P+LE+ +++ +GGQ Y+ YK+RTP L RL
Sbjct: 140 QGAWVSLTASAAWIAMSSETRAP---LGWLAYVGIGVWLLGMVLEVTADAQKSAFKADSANEGRFIRSGLWSRSRHPNYFGEIVLWIGVFLVAAP-VLSGWQWVAVISPLFVILLLTRVSGIPLLEQKAERTWGGQDDYEAYKKRTPVLIPRL 288
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A7S0SP67_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SP67_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.930e-33 Identity = 67/149 (44.97%), Postives = 94/149 (63.09%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRTPAL 445
QGLWVFLT LP+LVL+ D L + +GLG+W+ G EV+AD QK+ FK + +N+GK+I+ GLW RHPNY GE+++W G F+ S+G W + P FV LL +S P+LEK+++K +G AY++YKR P L
Sbjct: 157 QGLWVFLTSLPVLVLN--DSTKTQPHLNIFDFVGLGIWLIGLSTEVLADNQKQIFKKNPSNKGKFINEGLWKLSRHPNYFGEIILWFGVFISASQGFERPGQWLSIISPIFVSFLLINISGIPLLEKSANKHWGSDDAYKKYKREVPVL 303
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: UPI001AD08851 (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001AD08851) HSP 1 Score: 140 bits (352), Expect = 1.940e-33 Identity = 75/154 (48.70%), Postives = 93/154 (60.39%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGRGWTILAGPGFVILLLFLVS-TPMLEKASDKKYGGQAAYQEYKRRTPALHFRLW 460
QGLW+ T LV + E L +GL VWI GF +EV+AD QK F A+ N+GK+I GLWSR RHPNY GE+ +WVG V + +L G W L P FV LL+ VS PMLE +DKK+GGQA Y+ YK+RTP L RL+
Sbjct: 140 QGLWITFTAAAALVAITTTNRKE---LDAFALVGLLVWIFGFAIEVVADSQKSRFSANPANKGKFIRTGLWSRSRHPNYFGEIALWVGVAVI-ALPVLQGWQWVALISPVFVTLLITRVSGVPMLEAKADKKWGGQAEYESYKKRTPVLIPRLF 289
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Match: A0A835YPX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPX5_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.020e-33 Identity = 72/152 (47.37%), Postives = 94/152 (61.84%), Query Frame = 2
Query: 2 QGLWVFLTPLPMLVLHKLDPKGE--WGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNEGKYIDVGLWSRCRHPNYVGEMMIWVGFFVFCSRGLLTGR--GWTILAGPGFVILLLFLVSTPMLEKASDKKYGGQAAYQEYKRRTPAL 445
QG+W +TP+ +L+L P E W D G W+ G +EV AD QK A++A TN GK+IDVG+WS RHPNYVGE+++W G + C GL G+ GW L P FV LL +S P++E+ +DKK+GG A YQ YKRRT AL
Sbjct: 170 QGVWTVVTPMAVLMLQAAPPVAERCWWDYA-----GGAAWLLGMAIEVAADAQKSAWQAVPTNWGKFIDVGMWSWSRHPNYVGEVLLWWGVWGVCYGGL-RGQPWGWYTLVAPVFVSLLFVYISVPLIEEHADKKWGGLAEYQAYKRRTRAL 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13943.2413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13943.2413.1 >prot_H-paniculata_contig13943.2413.1 ID=prot_H-paniculata_contig13943.2413.1|Name=mRNA_H-paniculata_contig13943.2413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp MLVLHKLDPKGEWGDLGTREAIGLGVWITGFLLEVIADEQKRAFKADGTNback to top mRNA from alignment at H-paniculata_contig13943:752..5919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13943.2413.1 ID=mRNA_H-paniculata_contig13943.2413.1|Name=mRNA_H-paniculata_contig13943.2413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5168bp|location=Sequence derived from alignment at H-paniculata_contig13943:752..5919- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13943:752..5919- >mRNA_H-paniculata_contig13943.2413.1 ID=mRNA_H-paniculata_contig13943.2413.1|Name=mRNA_H-paniculata_contig13943.2413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig13943:752..5919- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |