mRNA_H-paniculata_contig1393.2408.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: D7FPF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPF5_ECTSI) HSP 1 Score: 410 bits (1054), Expect = 1.680e-132 Identity = 203/294 (69.05%), Postives = 224/294 (76.19%), Query Frame = 1
Query: 601 VALQTGIIVVLF--LRMRKDEAAVPGSTIRAAHGHQDARVSFVDEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWGKPGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLHTGGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPWSAA 1476
V LQ I+ L L + +D +T H RV FVD Q ++EL HLIMVP HGVT+TESL GAD D WFLLDYQKGKDVP A+VGHI+GGL+ L ADE ALLLFSGGKTR AGPKSEGESYFFVADHYDWWGKP LRARASTEDFARDSFEN+LFSICRFKE+TG YPT+ITVVG+DFKE RFE LH SLRFP +AFRYVGLH G FD AAA GE+TSA+ PYR DPYGCA GG L KR R+PFHRTPPY++VCPEM EL WC +LF G LPWS A
Sbjct: 76 VLLQAAAILGLLVSLALTRDRCRTAAAT---ESFHVGPRVVFVDSQASKELTHLIMVPCHGVTVTESLEGADSRDGDWFLLDYQKGKDVPRALVGHIQGGLDALDADENALLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFSICRFKEITGDYPTKITVVGFDFKEDRFEHLHMPSLRFPPEAFRYVGLHPEGRFDHAAAAEGERTSALEPYRSDPYGCAVGGTLVQKRHARDPFHRTPPYSMVCPEMSELLGWCETELFTGDLPWSPA 366
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A835Z903_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z903_9STRA) HSP 1 Score: 285 bits (728), Expect = 1.970e-85 Identity = 141/262 (53.82%), Postives = 174/262 (66.41%), Query Frame = 1
Query: 712 VSFVDEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWGKPGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLHT-GGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGP-LAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPWSAAISSAG 1491
V FV AR L HLIMVPGH +T+ + L A D W LLDYQ+ DV V HI+GG+ AAD ALLLFSGG+TR AGPKSEG SYF VA+ WWG+P +R RA++E+FARDSFENLLFS+ RF+E+TG YP +IT+VGYDFK R+ + H +LR+P+ A Y+G+ G FD A A AGE A +P++ DPYGC G P LA KR +RNP+ R PPY L PEM EL WC P ++ G LPW + G
Sbjct: 41 VHFVRAGAARLLTHLIMVPGHAITMGDGLAAAPETDEAWHLLDYQREHDVGITFVDHIQGGVTLAAADTAALLLFSGGQTRADAGPKSEGFSYFAVAEANSWWGQPQVRGRAASEEFARDSFENLLFSVARFREITGHYPEKITIVGYDFKRDRYVNQHAAALRYPARAVSYLGIAPRGARFDTAGATAGEAAHAALPFKTDPYGC--GSPVLADKRRDRNPYAREPPYPLTAPEMAELLRWCGPGIYAGALPWDPPAAEGG 300
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A812VDV9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812VDV9_9DINO) HSP 1 Score: 272 bits (695), Expect = 4.490e-78 Identity = 147/358 (41.06%), Postives = 199/358 (55.59%), Query Frame = 1
Query: 673 STIRAAHGHQDARVSFVDEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWG----KPGLRARAS----------------TEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLHT--GGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPWSAAISSAGV*GKTMNRTGYCQPYQV**VLL*NAVVEAMCVRKAAFNTLRTRKYLTIFTRCVRSPRIQATLR 1680
S I A + H A + +L HL+MV GH V + +SL H+++ WFL YQ+G+D+P A+V HI+ G+ A D ALL+FSGG+TR AGP++EG SY+ VA+++DWWG +P L A TE+FA DSF+N+LFS+CRFKEV G YP R+T+V + FK+QRF +LHR +LRFPS F Y+G+ G FD A AE+GE +A + ++ DPYGC L KR RNPF RT PY L CPE++ L +WC P +F G LPW A K + G + + +++ T R F RC RSPR + LR
Sbjct: 67 SAIHAGYVHDMAAGISFNISQLSQLSHLVMVAGHAVVMADSLEHIVHKESDWFLEAYQRGQDLPQALVSHIKAGVEAAALDPRALLIFSGGQTRAAAGPRNEGWSYYRVAEYFDWWGYSANRPDLLKEAQQRTQHITYLPVAQRTVTEEFALDSFQNVLFSLCRFKEVVGRYPDRVTIVSFTFKKQRFSELHRGALRFPSARFSYIGIQPPPGSRFDLAKAESGEHEAAKL-FQSDPYGC-HSQTLVEKRRARNPFQRTTPYLLSCPELKPLLQWCGPDIFRGALPWGLADREPSQKEKALRFRGPGDSF--------------LSGQRSEQRTSRDLAAQPPFARCARSPRQDSDLR 408
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: F0YCD0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCD0_AURAN) HSP 1 Score: 261 bits (666), Expect = 1.740e-77 Identity = 126/243 (51.85%), Postives = 164/243 (67.49%), Query Frame = 1
Query: 745 LKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWGKPGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRY--VGLHTGGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPW 1467
L+ L++V GH VT+ ESL G + D W+LL YQ+G+D+P V H R G A + ALL+FSGG+TR AGP+SE +SY+ +A+H+ WWG PG+ ARA+TE++ARDS+ENLLFSICRF+EV G YP + VV +DFKE+RF DLH ++RFP DAF + V + G FD AAA GE +A + DPYGC G L AKR R+PFHR PY VCPE+ L C +L++ LPW
Sbjct: 1 LRRLVVVAGHAVTMAESLEGVEENDASWYLLGYQRGRDLPREFVKHARRGAELAAGRDDALLVFSGGQTRRDAGPRSEAQSYWLLAEHFGWWGLPGVAARATTEEYARDSYENLLFSICRFREVAGDYPEAVDVVSFDFKERRFVDLHAPAIRFPKDAFHFEAVPVDGGSRFDGAAAAEGEAAAAAA-FEEDPYGC--DGELHAKRRSRDPFHRGVPYGTVCPELGGLLAHCGDRLYQEALPW 240
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A812GAR4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812GAR4_9DINO) HSP 1 Score: 265 bits (676), Expect = 2.990e-77 Identity = 132/288 (45.83%), Postives = 179/288 (62.15%), Query Frame = 1
Query: 673 STIRAAHGHQDARVSFVDEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWG----KPGL-----------------RARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLHT--GGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPW 1467
ST+ A + + A + +L HL+MV GH V + +SL H+++ WFL YQ+G+D+P A+V HI+ G+ A D ALL+FSGG+TR AGP++EG SY+ VA+++DWWG +P L RA TE+FA DSF+N+LFS+CRFKEV G YP R+T+V + FK+QRF +LHR +LRFPS F Y+G+ G FD AE+GE +A + ++ DPYGC L KR RNPF RT PY L CPE++ L +WC P +F G LPW
Sbjct: 36 STLHAGYVYDMAAGISFNVSQLSQLSHLVMVAGHAVVMADSLEHIVHKESDWFLEAYQRGQDLPQALVSHIKAGVEAAALDPRALLIFSGGQTRAAAGPRNEGWSYYRVAEYFDWWGYSANRPDLLREAQQRTQRTSTYLPVAQRAVTEEFALDSFQNVLFSLCRFKEVVGRYPDRVTIVSFTFKKQRFSELHRGALRFPSARFSYIGIQPPPGSRFDLVKAESGEHEAAKL-FQSDPYGC-HSQTLVEKRRARNPFQRTTPYLLSCPELKALLQWCGPDIFRGALPW 321
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A7S2HNT6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HNT6_9STRA) HSP 1 Score: 260 bits (665), Expect = 6.790e-76 Identity = 140/320 (43.75%), Postives = 191/320 (59.69%), Query Frame = 1
Query: 586 KWIFAVALQTGIIVVLFLRMRKDEAAVPGSTIRAAHG-HQDARVS-----FVDEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWW----------------GKPGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLH----TGGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPW 1467
K++ + + +V+LF ++ + ++ G H+ + VS F + +A + HLI+V GH V + +L A +++ WFLLDYQK +P AIV HIR G+ E A D +LL+FSGG+TR GP +EG SYF VAD D W G+ +RAR TE+FA DSFEN +FSICRFKE+TGSYP +ITVV + FK +RF+ LH ++L +P + F YVG+ TG FD A ++AGE +A P+ DPYGC L KR ERNPF RTPPY L CP+M L ++C P+LF +LPW
Sbjct: 24 KYLIIILISVLAVVLLFYNIQAAANTAVLESDKSLRGTHKKSWVSPNAQAFNEHLEATQTNHLIIVAGHSVIVAGNLEDAAYDENVWFLLDYQKSVGMPQAIVSHIRAGIAEAAKDPKSLLIFSGGETRASTGPVTEGSSYFRVADALDLWQGENINDVPLVGRLADGRTTVRARTITEEFATDSFENFMFSICRFKEITGSYPQKITVVSFTFKRRRFQQLHAKALHWPLNRFSYVGIDPLPSTG--FDLAKSKAGEVQNAAKPFESDPYGC-HSPILQQKRKERNPFSRTPPYKLSCPDMSRLLDYCGPELFPSELPW 340
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A7S2SSK2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSK2_9STRA) HSP 1 Score: 257 bits (657), Expect = 6.620e-75 Identity = 126/249 (50.60%), Postives = 162/249 (65.06%), Query Frame = 1
Query: 754 LIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWGKPGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLHT--GGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPWSAAISSAGV 1494
L++V GH V ++ES A + W L DYQ+G+ +P + HIRGG+ A + ALL+FSGG++R AGP+SEG SY+ VA W+ +P + +R E+F+RDSFENLLFSI RF+EVTG YPT I+VVG+ FKE RF DLHR +LRFP F Y+GL GG FD A GE +AV + DPYGC+ L KRL+RNPF RT PY++ CPE+R+L WC F G LPW +A GV
Sbjct: 85 LVVVAGHAVLLSESALQAGRGEEAWLLEDYQRGQGLPDVFISHIRGGVQAAAENPHALLVFSGGQSRTSAGPRSEGLSYWLVAQQSQWFHRPEVASRTVLEEFSRDSFENLLFSIARFREVTGRYPTAISVVGFAFKEHRFRDLHRSALRFPESGFEYIGLQPEPGGAFDVERAAQGELENAVTLFEKDPYGCS-APVLRGKRLQRNPFRRTVPYSVSCPEIRDLLAWCSASRFAGPLPWDSAGVGVGV 332
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A7S4S882_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S882_9STRA) HSP 1 Score: 257 bits (656), Expect = 8.940e-75 Identity = 128/259 (49.42%), Postives = 168/259 (64.86%), Query Frame = 1
Query: 703 DARVSFVDEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWG--KPGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLHTGGH--FDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPW 1467
D F + +A HLI+V GH V I +L A ++ W+LLDYQK +P IV HI+ G++E A D +LL+FSGG+TR GP +EG SYF VAD D W + G+RAR +TE+FA DSFENL+FSICRFKE+T YP +ITVV + FK++RFE+LH ++LR+P +AF YVG+ FD + E +A P+ DPYGC L KRL+RNPF RTPPY L C E+ +L +WC P+LF +LPW
Sbjct: 71 DDAQKFNEHSEAENANHLIIVAGHSVIIGGNLEDAASDEHVWYLLDYQKSVGMPQTIVSHIQAGISEAAKDPKSLLIFSGGETRASTGPVTEGSSYFRVADALDLWQDKRHGVRARTATEEFATDSFENLMFSICRFKEITKFYPQKITVVSFTFKQRRFEELHAKALRWPLNAFSYVGIDPSASTGFDLQKSTVAEYQNAAKPFETDPYGC-NSPILQQKRLDRNPFSRTPPYKLSCVELVDLLDWCGPELFPYELPW 328
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: A0A812SD12_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SD12_9DINO) HSP 1 Score: 254 bits (648), Expect = 1.660e-74 Identity = 125/261 (47.89%), Postives = 164/261 (62.84%), Query Frame = 1
Query: 754 LIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWGKPGLRA---------------------RASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGLH--TGGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLFEGKLPW 1467
++MV GH V + +SL H+++ WFL YQ+G+D+P A+VGHI+ G+ A D ALL+FSGG+TR AGP+ EG SY+ VA+++DWWG+ R R TE+FA DSF+N+LFS+CRF+EV G YP +ITVV + FK+ RF +LHR +LRF F Y+G+ G FD AEAGEQ +A + ++ DPYGC L KR RNPF RT PY L CPE+R L EWC P +F G LPW
Sbjct: 1 MVMVAGHAVVMADSLEHILHKESDWFLESYQRGQDLPQALVGHIKAGVEAAALDPKALLIFSGGQTRAAAGPRDEGWSYYRVAEYFDWWGETTSRPDLWTEAQQRSQRTSTYLPVAQRTVTEEFALDSFQNVLFSLCRFREVVGHYPDKITVVSFTFKKHRFSELHRGALRFLGARFSYIGIQPPAGSRFDLVKAEAGEQEAAKL-FQSDPYGC-HSQVLVEKRQARNPFQRTTPYLLSCPEIRPLLEWCGPDIFPGSLPW 259
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Match: B7FTW7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTW7_PHATC) HSP 1 Score: 250 bits (639), Expect = 2.690e-73 Identity = 125/254 (49.21%), Postives = 170/254 (66.93%), Query Frame = 1
Query: 724 DEQDARELKHLIMVPGHGVTITESLNGADHEDTPWFLLDYQKGKDVPHAIVGHIRGGLNELAADELALLLFSGGKTRVVAGPKSEGESYFFVADHYDWWGK-PGLRARASTEDFARDSFENLLFSICRFKEVTGSYPTRITVVGYDFKEQRFEDLHRESLRFPSDAFRYVGL----HTGGHFDQAAAEAGEQTSAVVPYRLDPYGCAQGGPLAAKRLERNPFHRTPPYALVCPEMRELFEWCLPQLF-EGKLPW 1467
D A KHLI+V GH V I+ L A ++T W+LL YQK + +P AIVGHI GLN DE +LL+FSGG+TR GP++EG SY+ VAD + W + +RAR +E+FA DSFENL+FSICRF+E+TGSYP ++TVV + FK++RFE+LH ++L++P +F Y+G+ +TG F+ A GE +A P+ +DPYGC L KR RNPF RTPPY L CP+M+EL +C P + + K+PW
Sbjct: 11 DGNRAANAKHLIIVAGHSVAISGHLEDAGRDETDWYLLPYQKNRGLPAAIVGHINTGLNAAEEDEQSLLIFSGGETRASTGPETEGASYYRVADAMNLWPENSSVRARTISEEFATDSFENLMFSICRFQEITGSYPEKVTVVSFTFKKRRFEELHAQALQWPKQSFSYIGVDPEANTG--FNLQEAVVGELENAAKPFEIDPYGC-HSQVLQEKRRSRNPFKRTPPYELSCPDMKELLSYCGPAIIPKSKVPW 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1393.2408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1393.2408.1 >prot_H-paniculata_contig1393.2408.1 ID=prot_H-paniculata_contig1393.2408.1|Name=mRNA_H-paniculata_contig1393.2408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=385bp MVYSRRSAAEIGSLYTYPLASSRTKQSINKSMFPLSSVDVVDLEAAGSYNback to top mRNA from alignment at H-paniculata_contig1393:9873..16292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1393.2408.1 ID=mRNA_H-paniculata_contig1393.2408.1|Name=mRNA_H-paniculata_contig1393.2408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6420bp|location=Sequence derived from alignment at H-paniculata_contig1393:9873..16292- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1393:9873..16292- >mRNA_H-paniculata_contig1393.2408.1 ID=mRNA_H-paniculata_contig1393.2408.1|Name=mRNA_H-paniculata_contig1393.2408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2310bp|location=Sequence derived from alignment at H-paniculata_contig1393:9873..16292- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |