prot_H-paniculata_contig1393.2407.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1393.2407.1
Unique Nameprot_H-paniculata_contig1393.2407.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length458
Homology
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BLAST of mRNA_H-paniculata_contig1393.2407.1 vs. uniprot
Match: A0A6H5JR65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR65_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.370e-13
Identity = 68/196 (34.69%), Postives = 93/196 (47.45%), Query Frame = 0 
Query:    8 PVIMVQLEPGEE-RQETSPEVQRNVCLKRFLHVTDFAGPQSLAATNGDSKMGQEGAT-EVKEGDKTTDPVMENADRSLQLEGEDRGASDSA---QNFGPREERECEEWRRCRLDPLWDGLGSLGERLASVDDLFNQLEQDLDHDQQVVETFQKQSYEEMAAAALDMEQAKVRRREGQQRTIFDENTHPKVPFGRSP 198
            PV+M+ LE G++ R + S     N  ++RFL VTDF        T G  ++G       V +   TT PV    D        D G  D       F   E     + R  RLDPLW+GLGSLGERLA V    +QL+Q++ HD++V+E +Q+++ EE   AA D               + D  TH  +P  RSP
Sbjct:  174 PVVMLPLELGQDWRNDAS-----NRTVRRFLKVTDF--------TEGSHEVGDRNTVASVSQSKHTTSPVHVQGDV-------DNGLVDPILMDHRFSRDESEGRGQGRTGRLDPLWEGLGSLGERLADVGGRLDQLDQEICHDREVIEGYQREAQEEAELAARD---------------LLDIRTHRSLPPTRSP 334
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BLAST of mRNA_H-paniculata_contig1393.2407.1 vs. uniprot
Match: D7FPF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF4_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 2.000e-11
Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 0 
Query:    8 PVIMVQLEPGEERQETSPEVQRNVCLKRFLHVTDFAGPQSLAATNGDSKMG-QEGATEVKEGDKTTDPVMENADRSLQLEGEDRGASDSAQNFGPREERECEE----WRRCRLDPLWDGLGSLGERLASVDDLFNQLEQDLDHDQQVVETFQKQSYEEMAAAALDMEQAKVRR 175
            PV+M+ LE G +R+  +     N  ++RFL V DF        T    ++G ++    + + + TT PV    D        D G  D       R+ R+  E     R  RLDPLW+ LGSLGERLA V   F+QL+Q++ HD++V+E +Q+++ EE   AA D+   + RR
Sbjct:  178 PVMMLPLELGHDRRNDAS----NRTVRRFLKVIDF--------TEKPHEVGDRDTVASIPQSEHTTSPVHVQGDV-------DNGVVDPIL-MDHRDSRDKSERRGQGRTGRLDPLWESLGSLGERLAVVGGRFDQLDQEICHDREVIEGYQREAQEEAELAARDLLDIRTRR 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1393.2407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JR65_9PHAE2.370e-1334.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF4_ECTSI2.000e-1134.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1393contigH-paniculata_contig1393:6247..9434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1393.2407.1mRNA_H-paniculata_contig1393.2407.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1393 1337..9522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1393.2407.1 ID=prot_H-paniculata_contig1393.2407.1|Name=mRNA_H-paniculata_contig1393.2407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=458bp
MLALGADPVIMVQLEPGEERQETSPEVQRNVCLKRFLHVTDFAGPQSLAA
TNGDSKMGQEGATEVKEGDKTTDPVMENADRSLQLEGEDRGASDSAQNFG
PREERECEEWRRCRLDPLWDGLGSLGERLASVDDLFNQLEQDLDHDQQVV
ETFQKQSYEEMAAAALDMEQAKVRRREGQQRTIFDENTHPKVPFGRSPSN
PDKDDDVFTANSTGVFEDENALISEGVASMGDGGHAKNETSEDSASVAAE
KELREARELLGSINRYLKSNDDRPDKTGVGDKKTSQPLPPASPSSPTHGP
PPVAKASNTKSKDEKVEPPHPLAARRHLHLTNPPTSKYPELFQLVNPTSS
STPSKQRAESSFPFSRGTQKFDYDSFLQKTENDISEGAKLPWRNEAMSMT
AGRGGSERSIHIEQIGYRRQCALGTVVAHFPTAVAAARARVRSKRIAKRR
TLAVGYL*
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