mRNA_H-paniculata_contig13927.2405.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: D7FQ56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ56_ECTSI) HSP 1 Score: 398 bits (1023), Expect = 1.870e-134 Identity = 190/269 (70.63%), Postives = 219/269 (81.41%), Query Frame = 1
Query: 1 RQKDVFEQRYGYSWDLCIVFPTEAPPGAPSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKYGTSPRLTNMYSCPPYLEHPFSSVHRIKLIRRMIESNKGDGCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLNLDAMLAPYFAIFVSFWAV 807
R +DVFE RYGYSWDLC++FPT+ P G P A I+R+L N G+ETYLY SVQ DEIICKIRAPLERL+RYAADV Y MLLDE K+K AVE GSK+PPIAGRHITHDPTIT YRPHE IYGKYGTS RLT M++C LEHPFSS+HRIK++RRM+ES + DGC +NV +L R A+KAFFPFH + R +F WVKR P DQPLD +K+Y+GEKI +YFALLGHYT WLGPLSV GL MSI+QI + +LDA LAPYFAIFVSFWAV
Sbjct: 28 RPRDVFETRYGYSWDLCMIFPTDPPSGVPHASEIIRRLHNAGMETYLYYSVQMDEIICKIRAPLERLARYAADVEYLMLLDETKLKRAVEQGSKDPPIAGRHITHDPTITMYRPHELIYGKYGTSQRLTPMFACKAGLEHPFSSMHRIKILRRMVESTEADGCGINVSVLMRNDALKAFFPFHQETVRDALFVKWVKRSLHPIDQPLDDIKEYVGEKIGIYFALLGHYTTWLGPLSVVGLAMSIDQICEWDLDAALAPYFAIFVSFWAV 296
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A1V9ZZN0_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZN0_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.770e-43 Identity = 98/276 (35.51%), Postives = 148/276 (53.62%), Query Frame = 1
Query: 4 QKDVFEQRYGYSWDLCIVFPTE-------APPGAPSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKYGTSPRLTNMYSC--PPYLEHPFSSVHRIKLIRRMIESNKGDG-CNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLNLDAMLAPYFAIFVSFW 801
Q + F++R+GY++D VF S I+++L GLET L+ S D + CKIRA L+RL + A + + D ++K+ + G E IA I+ + + TK P+++I+GKY RL N+Y P + PF V RIKLI +I + DG C+LN+ MLE + + F H+ E R + W+K + P DQP +++KDY GEK+ LYF LGHYT WL S+ G M + +++ +DA F IF++ W
Sbjct: 18 QSEKFKERHGYNYDYVFVFKVHDENQKLSQAQTTFSMRLILQRLAGAGLETRLFYSTTRDLVFCKIRASLQRLCKEADRIDLKLEFDPKELKQIAQAGYPERNIAPIIISEESSQTKRSPYQNIFGKYDMDERLQNVYKKYGPKDKQTPFRGVDRIKLILSIIHAPVHDGGCHLNLKMLEMKECIVTSFALHNFEERDTLNDKWIKWSSLPWDQPYNEIKDYYGEKVGLYFVWLGHYTTWLIAPSIIGAIMLADIVVEGTVDARFLALFGIFMALW 293
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A1V9ZYI8_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYI8_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.470e-41 Identity = 101/279 (36.20%), Postives = 144/279 (51.61%), Query Frame = 1
Query: 10 DVFEQRYGYSWDLCIVFPT-----EAPPGAPSA-------ESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKYGTSPRLTNMYSC--PPYLEHPFSSVHRIKLIRRMIESNKGDG-CNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLNLDAMLAPYFAIFVSFW 801
D FEQ+ G+++D +VF E PS I+ +L N GLET L+ + D +ICKIRA ERL + A + + LD +++ + G K IA HI+ + T T E+I+GKY RL +Y P + PF V RIKLI +I+++ DG C LN+ MLE + F HD E R R+ W+ + P QP + +KDY GEKI LYF LGHYT WL S+ G M + ++ +DA +F +F++ W
Sbjct: 2 DPFEQKNGFNYDYALVFKLGDGEDEKDKKEPSEFQKKYNQRFILARLANAGLETKLFHATIKDIVICKIRASYERLCKEADRIDMKLELDPVELQAMAQAGDKAKGIAEIHISAEHTHTHRNAFENIFGKYDMEERLQRVYKKYGPEGKKIPFRGVDRIKLILSIIQAHIHDGGCALNLQMLEVNNCLVTAFALHDFEERDRLNEKWINWSSPPWKQPYNDIKDYYGEKIGLYFVWLGHYTTWLIAPSIVGALMLADIAIEATVDARFLAFFGVFMAMW 280
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: D7FQE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE2_ECTSI) HSP 1 Score: 157 bits (397), Expect = 4.350e-41 Identity = 93/261 (35.63%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 31 GYSWDLCIVFP-TEAPPGAPSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKYGTSPRLTNMYSCPPYLEHPFSSVHRIKLIRRMIESNKG-DGCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLNLDAMLAPYFAIFVSFWAV 807
GY +D +VF + A ++K+ G + +YLS +E+ C++RA +ERL +YA V MLLD ++ EA G E IA I +DP I+ P+E+IY +Y P L ++Y + HPF +V R+ + ++++ G L V L+ QG + A FP H + + R+ W+ P + P DQ+KDY GEKI LYF LGH T WL PL VAGL ++ + N + ++ FA V FWA+
Sbjct: 214 GYGFDYVMVFKLSRVGVMTDYATETIKKIMAAGFKVRVYLSCSKEEVFCEMRASVERLMQYADQVNRKMLLDRFQLSEAAAAGDPEAKIAPIKINNDPNISFRSPYEYIYARYDRRPDLQHLYYKSDGMWHPFRAVVRLSISIDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRNNWLVAKQWPWESPYDQIKDYYGEKIGLYFHFLGHLTTWLIPLGVAGLITAMTVYISGNEEHVITLIFAPIVVFWAI 474
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A6H5KW18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW18_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.800e-39 Identity = 93/261 (35.63%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 31 GYSWDLCIVFP-TEAPPGAPSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKYGTSPRLTNMYSCPPYLEHPFSSVHRIKLIRRMIESNKG-DGCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLNLDAMLAPYFAIFVSFWAV 807
GY +D +VF + A +RK+ G + +YLS +E+ C++RA +ERL +YA V MLLD ++ EA G E IA I +DP I+ P+E+IY +Y P L ++Y + HPF +V R+ + ++++ G L V L+ QG + A FP H + + R+ W+ P + P +Q+KDY GEKI LYF LGH T WL PL VAGL ++ + N + ++ FA V FWA+
Sbjct: 215 GYGFDYVMVFKLSRVGVMTDYATETIRKIMAAGFKVRVYLSCSKEEVFCEMRASVERLMQYADQVNRKMLLDRFQLSEAAAAGDPEAKIAPITINNDPNISFRSPYEYIYARYDRRPDLQHLYYKSDGMWHPFRAVVRLSISIDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRNNWLVAKQWPWETPYEQIKDYYGEKIGLYFHFLGHLTTWLIPLGVAGLITAMTVYISGNEEHVITLIFAPIVVFWAI 475
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A482SUW2_9ARCH (Anoct_dimer domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUW2_9ARCH) HSP 1 Score: 151 bits (382), Expect = 2.900e-38 Identity = 89/279 (31.90%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 7 KDVFEQRYGYSWDLCIVFPTEAPPGA-------PSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGR----HITHDPTITKYRPHEHIYGKYGTSPRLTNMYSCPPYLEHPFSSVHRIKLIRRMIESNKGDG-CNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQ-LNLDAMLAPYFAIFVSFWA 804
KD F GYSWD IVF + + ++++L + GL+T ++ SVQ+DE+ KIR P RL + A + Y + ++ +++ + G+ + P+ + + T P++++Y ++ + +++ P E F V R+KLI +I + + +G C+L+V L+R + AFFP HD R + W++ P Q ++ VKDY GEKIAL+F LGHYT WL P + G+F IN + N A + P+FA FV+ W+
Sbjct: 82 KDPFRNTNGYSWDYVIVFRVHNADAKLKPVQQEKNIKFVIQRLSDAGLQTKMFYSVQNDEVYLKIRCPYSRLIQEADRINYRLCMEPSQLGNQLRIGNMKGPVEKQWKPVEVPSSSLETNLNPYDYMYCEFRPNLHEQSLFKKWPN-ESVFRGVDRLKLIATIIAAKQTEGGCDLDVYRLKRDSCILAFFPLHDAVELRELEEKWLRMCQVPWKQNVEAVKDYFGEKIALFFLFLGHYTSWLFPAGIIGVFAWINVVSDDNNPSAPIMPFFAAFVAIWS 359
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: D8LEZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ6_ECTSI) HSP 1 Score: 149 bits (376), Expect = 2.370e-37 Identity = 89/246 (36.18%), Postives = 134/246 (54.47%), Query Frame = 1
Query: 88 SAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKYGTS-PRLTNMYSCPPYLEH-----PFSSVHRIKLIRRMIESNKGD-GCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLN-LDAMLAPYFAIFVSFW 801
S + I+ +L G+ET ++ SVQ DE+ CKIR PLERL R A VGY +LLD ++ + G + A I + + Y +E+IY Y P L ++Y LE PF R+KL+ ++ + D GCNL+++ L + + AFFP HD R + W++ + P +P+D VK+Y GEKI LYF LGHYT WL P S+ G+ ++ + N +A+ + F+IF+ W
Sbjct: 20 SMKEILTRLNAGGIETRMFYSVQRDEVYCKIRCPLERLQREADRVGYKILLDANNLRSTCQHG-RPGKWASIVIQDEYNESPYEAYEYIYAPYTVDRPELESLYKKHGGLEREVMMIPFRGTDRLKLLYSILVAKTADSGCNLDILRLVKSKCLLAFFPLHDKVELRALQRKWLQYFRPPWKEPIDDVKNYFGEKIGLYFLWLGHYTTWLIPASIVGVMAWVHVALSGNDPNALGSALFSIFIGLW 264
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A7S4E8J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8J5_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.380e-35 Identity = 87/276 (31.52%), Postives = 152/276 (55.07%), Query Frame = 1
Query: 7 KDVFEQRYGYSWDLCIVFPTEAPPGAPSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITK-YRPHEHIYGKYGTSPRLTNMYSCPPYLEHPFS-SVHRIKLIRRMIESNKG-DGCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTV------WLGPLSVAGLFMSINQIMQLNLDAMLAPYFAIFVSFWAV 807
+D F +YGY WD C+ F +S++ +L + G+ET L S +RAP+ RL+R A + + + ++E KVKEA+E G P I GR + HDP +T RP+E I+GKY T+ ++ +Y P H F+ + R+KL+ +IE GC +N L++ ++A +P HD E+R +V + +R+ GD ++ ++DY+G+++ALYFA + H+T ++G + +++ + I + + + P+F+ F WA+
Sbjct: 63 EDEFRAKYGYGWDACVCFTVVDNALTEQQQSVITRLESGGIETKLVESSDGKRRWALLRAPVHRLARAADALDWVVPMNEEKVKEAIERGG--PGIKGRKLRHDPKLTNNVRPYECIHGKYETNSQMQVLYEVPRGYPHLFAWPLLRLKLLGTIIEQRPSRGGCGVNFHRLQKNNIIEAAYPLHDVEKREQVMEEF-QRWGLRGD--VNNIRDYVGDRLALYFAFVHHFTAGCALSAFVGVATTFIMYLEASVIDRPRAKSRMLPFFSAFQCIWAI 333
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.340e-34 Identity = 87/248 (35.08%), Postives = 130/248 (52.42%), Query Frame = 1
Query: 100 IVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGSKEPPIAGRHITHDPTITKYRPHEHIYGKY-GTSPRLTNMY----------SCPPYLEHPFSSVHRIKLIRR-MIESNKGDGCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGLFMSINQIMQLNLDAML--APYFAIFVSFW 801
I+ +L G+ET +Y + Q DEI CK+R P+ERL + A +GY +LLD + ++ + G + +G I + +Y P+EH++ Y P + ++Y S P + F V R+KL+ M+ + GCNL++V L + A+ FFP HD R + W + +P QP+ VKDY GEKI LYF LGHYT WL P S+ G+ IN N D + F++FV+ W
Sbjct: 25 ILNRLAAGGMETRMYYNAQRDEICCKVRCPVERLQKEAGRIGYKLLLDSSVLRSTCQHG-RPGRWSGLVIQDEHNQCRYEPYEHLHAPYLSDRPDMESLYKRYGDAAGAGSAPKIV---FRGVDRLKLMYTIMVAKSSEGGCNLDIVKLLKYKAILGFFPLHDKVELRLLQRAWFRYVQAPWAQPIQDVKDYYGEKIGLYFLWLGHYTTWLLPASICGILAWINVAAAGN-DPNVPGTAAFSVFVALW 267
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Match: A0A6V2ZSX1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZSX1_HETAK) HSP 1 Score: 140 bits (354), Expect = 3.460e-34 Identity = 96/288 (33.33%), Postives = 145/288 (50.35%), Query Frame = 1
Query: 10 DVFEQRYGYSWDLCIVFPT-----EAPPGAPSAESIVRKLGNTGLETYLYLSVQDDEIICKIRAPLERLSRYAADVGYTMLLDEAKVKEAVEGGS-KEPPIAGRHITHDPTITKYRPHEHIYGKY-----GTSPRLTNMYSCPPYLEHP-FSSVHRIKLIRRMIESNKGD---GCNLNVVMLERQGAVKAFFPFHDDERRRRVFALWVKRYTSPGDQPLDQVKDYLGEKIALYFALLGHYTVWLGPLSVAGL--FMSI-------NQIMQLNLDAMLAPYFAIFVSFW 801
D F++ GYSWD +VF + P G + + IV L + GLET L+ SVQ D++ CKIR PLERL YA V Y +L+D ++K+ E G+ K PI D + +E IY +Y G + ++ +Y Y F + R+KLI ++ + G NLN+ ++ + ++ FP HD + + W+K P QP D +KDY GEKI LY+ LGHYT WL P + GL + +I N + + A++A + F+ +W
Sbjct: 88 DEFQETNGYSWDWVMVFKVFDEDDKFPEGQKTMKEIVTALHSAGLETQLFFSVQRDKVYCKIRVPLERLKGYADKVDYKLLMDPDELKQYCERGTAKWNPIK----IVDESDELLPAYECIYMEYRKTQEGDTKNISMLYK--KYSNRTNFKGIDRLKLIYGIMTAKNDPEFMGANLNITEMKDKKGIEDLFPLHDYDELVGLEKRWLKLMQWPWQQPTDDIKDYFGEKIGLYYVWLGHYTTWLMPPMLTGLGFWFAIATQGGDPNTVYLIPFSALIALWATFFLEYW 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13927.2405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13927.2405.1 >prot_H-paniculata_contig13927.2405.1 ID=prot_H-paniculata_contig13927.2405.1|Name=mRNA_H-paniculata_contig13927.2405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp RQKDVFEQRYGYSWDLCIVFPTEAPPGAPSAESIVRKLGNTGLETYLYLSback to top mRNA from alignment at H-paniculata_contig13927:1129..6641- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13927.2405.1 ID=mRNA_H-paniculata_contig13927.2405.1|Name=mRNA_H-paniculata_contig13927.2405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5513bp|location=Sequence derived from alignment at H-paniculata_contig13927:1129..6641- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13927:1129..6641- >mRNA_H-paniculata_contig13927.2405.1 ID=mRNA_H-paniculata_contig13927.2405.1|Name=mRNA_H-paniculata_contig13927.2405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1626bp|location=Sequence derived from alignment at H-paniculata_contig13927:1129..6641- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |