prot_H-paniculata_contig1389.2384.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1389.2384.1
Unique Nameprot_H-paniculata_contig1389.2384.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length599
Homology
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: D7FRR9_ECTSI (rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR9_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 5.210e-35
Identity = 95/233 (40.77%), Postives = 144/233 (61.80%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWLAIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVSEKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHGDNVTRIEAVKARA 583
            + AR+V ERGL  VS  E  +   LW SL++ EH+ G+ ++ K VS RAC++S+   V+  + E+H           E+CE VF++ +K  + R S++VW+A QLSRL+RG   GA E L  S+  L+R  +V V+SRFA + F+  S +RGR ++E L+ +YP+RL+LW  +   E + G ++  RNL ERLT  +D    ++ + VF  Y+ FE +HGD   R+ AVKA+A
Sbjct: 2113 EGARAVCERGLKAVSFREEQERFNLWVSLINLEHKYGSRSTLKAVSERACQNSNPKKVYLHMAEMHEKAQES-----EECEEVFQAAVK--KFRHSQKVWVAYQLSRLKRGDDAGAREALKRSLQSLARHKHVSVISRFAQNEFEHGSVERGRSVFEGLMASYPKRLDLWNVYFDKEVKAGDLRAARNLLERLTG-MDFN-AKRMKGVFKKYLQFEMEHGDEA-RVNAVKAKA 2335          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: A0A6H5LPP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPP1_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.250e-34
Identity = 93/233 (39.91%), Postives = 144/233 (61.80%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWLAIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVSEKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHGDNVTRIEAVKARA 583
            + AR+V ERGL  VS  E  +   LW SL++ EH+ G+ A+ K VS RAC++S+   ++  + E+H           E+CE VF++ +K  + R S++VW+A QLSRL+RG   GA E L  S+  L+R  +V V+SRFA + F+  S +RGR ++E L+ +YP+RL+LW  ++  E + G ++  RNL ERL+  +D    ++ + VF  Y+ FE +HGD    + AVKA+A
Sbjct: 2167 EGARAVCERGLKAVSFREEQERFNLWVSLINLEHKYGSRATLKTVSERACQNSNPKKIYLHMAEMHEKAQES-----EECEEVFKAAVK--KFRHSQKVWVAYQLSRLKRGDDAGAREALKRSLQSLARHKHVSVISRFAQNEFEHGSVERGRSVFEGLMASYPKRLDLWNVYLDKEVKAGDLRAARNLLERLSG-MDFN-AKRMKGVFKKYLQFEMEHGDEAG-VNAVKAKA 2389          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: UPI0003F0D44D (protein RRP5 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D44D)

HSP 1 Score: 92.0 bits (227), Expect = 9.950e-16
Identity = 69/231 (29.87%), Postives = 124/231 (53.68%), Query Frame = 0
Query:  356 ARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWLAIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVSEKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHGDNVTRIEAVKARA 583
            AR+V ER L T+S  E  +   +W + L+ E+  GT  +  ++  RA +  D   VFR +  I++    KT    E+ E ++ + ++       K+VW +  +  ++ G +  A +++  S   L + D+V ++ +FA   FKF   +RGR ++E ++  YP+R ++W  +I    + GHI  +R LFER+   L+L   ++ +  F  Y+ FEK +G+  T +E VK +A
Sbjct:  499 ARAVAERALKTISFREEQEKLNVWVAYLNLENLYGTNETLVKLFERALQMCDPLKVFRSMINIYT----KTQK-LEEAEQLYSTMVRRFNFH--KDVWASYGMFLMKSGKLDAARKIMQRSFKSLDKSDHVEIIVKFAQFEFKFGEPERGRTMFENVLSNYPKRTDIWSIYIDMVIKQGHIDAIRQLFERVIH-LNLS-PKRMKFFFKRYLEFEKKYGEEST-VENVKQKA 719          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: A0A6A5KBN8_9PLEO (Nucleic acid-binding protein n=1 Tax=Decorospora gaudefroyi TaxID=184978 RepID=A0A6A5KBN8_9PLEO)

HSP 1 Score: 75.1 bits (183), Expect = 2.940e-10
Identity = 59/236 (25.00%), Postives = 119/236 (50.42%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWLAIQ---LSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVS--EKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHGDNVTRIEAVKA 581
            + AR +  R L T++  E  +   +W +LL  E++  +  +   V + AC+++D+  +   + +I+      + G  +K +++++S MKNK      + WL+     +  L+      A  +L  +   ++   + ++  +FA   FK  +   +RGR I+E LV  +P++ ++W  ++A E   G   +VR+LFER++K   +  + + + VF  +  +E   G N   +E VKA
Sbjct: 1547 EKARQIARRALATINPREEKEKMDVWTALLHLENDFASDDAVDSVFKEACQNNDSREMHERMIKIYL-----SSGKVDKADTLYQSMMKNKSFTPDPQFWLSYATFLMDVLQPPSPTRARALLQRATQSVASPQHRYLTQKFAALEFKSANGDAERGRTIFEGLVDTWPKKGDVWDMYVALEMSHGDQDKVRDLFERMSK---VGKSSRVKTVFKRWAEWESG-GGNRKGVEKVKA 1773          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: E3RY42_PYRTT (Uncharacterized protein n=8 Tax=Pyrenophora TaxID=5027 RepID=E3RY42_PYRTT)

HSP 1 Score: 73.2 bits (178), Expect = 1.160e-9
Identity = 57/225 (25.33%), Postives = 113/225 (50.22%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWL---AIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVS--EKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHG 570
            + AR V  R L T++  E  +   +W +LL  E++  +  + + V + AC+++D+  +   + +I+      + G  +K +S+++S MKNK   +  + WL   A  +  L+      A  +L  +   ++   + ++  +FA   FK  +   +RGR I+E LV  + ++ ++W  ++  E   G   +VR+LFER+TK   +  + + R VF  +  +E   G
Sbjct: 1549 EKARQVARRALVTINPREEKEKLDVWTALLHLENDFASDDTIEGVFKEACQNNDSREMHERMIKIYI-----SSGKLDKADSLYQSMMKNKSFTQDPKFWLSYAAFLMDVLQPPSASQARALLQRATQSVASTQHRYLTQKFAALEFKSPNGDAERGRTIFEGLVDTFAKKGDVWDMYLMLEQSHGDEDKVRDLFERMTK---VGKSSRVRSVFKKWAEWENGVG 1765          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: A0A293LCF4_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LCF4_ORNER)

HSP 1 Score: 72.0 bits (175), Expect = 2.450e-9
Identity = 60/221 (27.15%), Postives = 111/221 (50.23%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWLAIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVSEKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHGD 571
            + AR V +R L T+S  E  +   +W +L++ E+  GT  + +     A + +D  +V + + +I+    SK     E+ E +F+         RS EV L      ++ G +  A  +L  ++  L R  +V ++S+FAL  FK+  ++RG+ +++ ++  YP+R +LW  +I    + G ++ VR LF + T         + +  F  ++ FEK HGD
Sbjct: 1040 EKARRVADRALHTISFREETEKLNIWKALVTLENTYGTKETLQVAFGEALKCNDGLTVHKHLMQIYV-ASSKN----EEAEQLFKRMFIKY---RSPEVCLLGGTFYMKLGKLEEARALLQRALKCLERQHHVGLISKFALMEFKYGDQERGKSMFDNILVNYPKRTDLWSVYIDILIKQGDVEGVRTLFAKATS--SKFQPTKMKIFFKKWLDFEKGHGD 1250          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: R0K2J8_SETT2 (Uncharacterized protein n=1 Tax=Setosphaeria turcica (strain 28A) TaxID=671987 RepID=R0K2J8_SETT2)

HSP 1 Score: 68.9 bits (167), Expect = 2.380e-8
Identity = 54/227 (23.79%), Postives = 109/227 (48.02%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWLAIQ---LSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVS--EKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFEKDHGDN 572
            + AR +  R L T++  E  +   +W +LL  E++  +  +   V + AC+++D   V   + +I+      + G  +K + +++S MKNK      + WL+     +  ++      A  +L  +   ++   + ++  +FA   FK  +   +RGR I+E LV  + ++ ++W  ++  E   G   +VR+LFER+TK   +    + R VF  +  +E    +N
Sbjct: 1554 EKARQIARRALATINPREEKEKLDVWTALLHLENDFASDDAITSVFKEACQNNDAREVHERMIKIYI-----SSGKIDKADQLYQSMMKNKSFTPDPKFWLSYATFLMDVVQPPSPTRARALLQRATQSVAAPQHRYLTQKFAALEFKSPNGDTERGRTIFEGLVDTFAKKGDVWDMYLMLEQSHGEPDKVRDLFERMTK---VGKASRIRSVFKKWAEWENSVANN 1772          
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Match: M2T7N9_COCSN (Uncharacterized protein n=7 Tax=Bipolaris TaxID=33194 RepID=M2T7N9_COCSN)

HSP 1 Score: 68.6 bits (166), Expect = 3.130e-8
Identity = 53/221 (23.98%), Postives = 108/221 (48.87%), Query Frame = 0
Query:  354 QAARSVGERGLTTVSAPEGGK---LWASLLSAEHELGTAASFKEVSRRACEDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVWL---AIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVS--EKRGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLMMTEQAREVFNMYVSFE 566
            + AR +  R L T++  E  +   +W +LL  E++  +  +   V + AC+++D   +   + +I+      + G  +K + +++S MKNK      + WL   A  +  ++      A  +L  +   ++   + ++  +FA   FK  +   +RGR I+E LV  + ++ ++W  ++  E   G   +VR+LFER+TK   +  + + R VF  +  +E
Sbjct: 1554 EKARQIARRALVTINPREEKEKLDVWTALLHLENDFSSDDAINAVFKEACQNNDDREIHERMIKIYI-----SSGKIDKADELYQSMMKNKSFTADPKFWLSYAAFLMDVIQPPSPARARALLQRATQSVAAPQHRYLTQKFAALEFKSPNGDTERGRTIFEGLVDTFAKKGDVWDMYLMLEQSHGESDKVRDLFERMTK---VGKSSRIRGVFKKWAEWE 1766          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1389.2384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FRR9_ECTSI5.210e-3540.77rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus si... [more]
A0A6H5LPP1_9PHAE2.250e-3439.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0003F0D44D9.950e-1629.87protein RRP5 homolog n=1 Tax=Saccoglossus kowalevs... [more]
A0A6A5KBN8_9PLEO2.940e-1025.00Nucleic acid-binding protein n=1 Tax=Decorospora g... [more]
E3RY42_PYRTT1.160e-925.33Uncharacterized protein n=8 Tax=Pyrenophora TaxID=... [more]
A0A293LCF4_ORNER2.450e-927.15Uncharacterized protein (Fragment) n=1 Tax=Ornitho... [more]
R0K2J8_SETT22.380e-823.79Uncharacterized protein n=1 Tax=Setosphaeria turci... [more]
M2T7N9_COCSN3.130e-823.98Uncharacterized protein n=7 Tax=Bipolaris TaxID=33... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 533..553
NoneNo IPR availablePANTHERPTHR23270PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5coord: 354..584
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 414..595
e-value: 3.4E-18
score: 67.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 424..586

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1389contigH-paniculata_contig1389:12579..17785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1389.2384.1mRNA_H-paniculata_contig1389.2384.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1389 11599..17929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1389.2384.1 ID=prot_H-paniculata_contig1389.2384.1|Name=mRNA_H-paniculata_contig1389.2384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp
MFDDGEHAIDRRRKCAHEGCSTKPCFGVMGSTTAKFCARHSETGMVDVMN
RTCVVEGCFKQPHYGVPGSKTGKFCALHSADGTADVTTKPCAHDGCSTQP
FFGVWGTKRAEYCVRHKKRDMVNIWAKMCSQGGCTKTASFGVEGTTIREF
CATHKKLLMVNLLRRMCSHPTCHSTAAFSTPGRSAADFCEIHAAAGMVDV
RRSRCAYPDCRKLGKRGQDGKSKAFCPFHTNSRAGAVSASAAVLEAAAAA
ATVEAARKNPDDRSNHGKPSATAVASAPIASSRVTRLSATDSAITSSRVT
RLSATGSAITSSRVTRLSATGSGDGIAKRVCCVAPRQRPPPQPLAVTGIG
SSSQAARSVGERGLTTVSAPEGGKLWASLLSAEHELGTAASFKEVSRRAC
EDSDTSSVFRCVGEIHSDYDSKTDGWCEKCESVFRSTMKNKQCRRSKEVW
LAIQLSRLRRGYVVGAWEVLLLSVDYLSRDDYVFVVSRFALHNFKFVSEK
RGREIYECLVQAYPERLELWKGFIAAETETGHIQRVRNLFERLTKELDLM
MTEQAREVFNMYVSFEKDHGDNVTRIEAVKARARKSLTMTKKRLLPSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf