mRNA_H-paniculata_contig13855.2363.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE) HSP 1 Score: 262 bits (670), Expect = 3.900e-77 Identity = 167/460 (36.30%), Postives = 244/460 (53.04%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGH--SLILSFNVLTWKP---SLTFLRLS------------RQILGLG-W---RMRSCLTSLCARLGR------------------------------------DLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 1321 K DE G + K KARLVA+GF Q H +D+L F+P A+S+++++A+ + + + LD++Q F+Q L+ VFMKL CG S ++VRLNK++YG KQ R RLV L + QS S+PCV R V ++ HVDD++ G ++ AAL T GE+K++LGC+F RD G + S+ + S++ FNV+ S T + S R+++G W + R ++++ + R D+ VYVD D+A K+ RRSVSG V + G +V TS TQ CV STSEA+Y+ M G K ALF +L+FL+P R I +LEDN+GA +A+NP S+GRRKHID+R+HF+R L +++ + ++Q ADIL K L R FE H F++ L E Sbjct: 221 KADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDILYAGSKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLSE 679
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 267 bits (682), Expect = 8.130e-76 Identity = 171/458 (37.34%), Postives = 245/458 (53.49%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 1321 K +++G + KARLVARGFSQ NVD+ +P +++S+K+++AV E + DVKQ + A L+ EVF+KL CG+KS +I + +A+YG KQ GR + LV N Q K++PCVFR VV MI+ +VDD++V G +C L A+L +F T GE +W+ GC+ RD+ G ++ + S++ F+V + W +P ++F ++R R + + L G L L+VYVD YAD + RRSVSG+A +GG VV+ S TQ V+LS++EA+Y+ +G K ALF RAVL F+ P+ SG I +LEDNQGA + +NP S+GR KHID+RYHFIR L + V++ +Q AD+L K L R S + H R LMNLPE Sbjct: 791 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1246
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JU90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU90_9PHAE) HSP 1 Score: 262 bits (669), Expect = 1.240e-75 Identity = 160/406 (39.41%), Postives = 222/406 (54.68%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCS-FWRDI---VRGVAASRNGHSLILSFNVLTWKPSLTFLRLSRQILGLGWRMRSCLTSLCARLGRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 1321 K +++G + KARLVARG SQ NVD+ +P +++S+K+++AV E + DVKQ + A L+ EVF+KL CG+KS +I + +A+YG KQ GR + LV N Q K++PCVFR VV MI+ +VDD++V G +C L A+L +F T GE +W+ GC+ RD+ + + G L L+VYVD YAD + RRSVSG+A +GG VV+ S TQ V+LS++EA+Y+ +G K ALF RAVL F+ P+ SG I +LEDNQGA + +NP S+GR KHID+RYHFIR L + V++ +Q AD+L K L R S + H R LMNLPE Sbjct: 452 KTNQEGKIDTLKARLVARGVSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAAIERDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSMVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 855
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 267 bits (682), Expect = 1.690e-75 Identity = 171/458 (37.34%), Postives = 245/458 (53.49%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 1321 K +++G + KARLVARGFSQ NVD+ +P +++S+K+++AV E + DVKQ + A L+ EVF+KL CG+KS +I + +A+YG KQ GR + LV N Q K++PCVFR VV MI+ +VDD++V G +C L A+L +F T GE +W+ GC+ RD+ G ++ + S++ F+V + W +P ++F ++R R + + L G L L+VYVD YAD + RRSVSG+A +GG VV+ S TQ V+LS++EA+Y+ +G K ALF RAVL F+ P+ SG I +LEDNQGA + +NP S+GR KHID+RYHFIR L + V++ +Q AD+L K L R S + H R LMNLPE Sbjct: 1170 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1625
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 267 bits (682), Expect = 1.750e-75 Identity = 171/458 (37.34%), Postives = 245/458 (53.49%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 1321 K +++G + KARLVARGFSQ NVD+ +P +++S+K+++AV E + DVKQ + A L+ EVF+KL CG+KS +I + +A+YG KQ GR + LV N Q K++PCVFR VV MI+ +VDD++V G +C L A+L +F T GE +W+ GC+ RD+ G ++ + S++ F+V + W +P ++F ++R R + + L G L L+VYVD YAD + RRSVSG+A +GG VV+ S TQ V+LS++EA+Y+ +G K ALF RAVL F+ P+ SG I +LEDNQGA + +NP S+GR KHID+RYHFIR L + V++ +Q AD+L K L R S + H R LMNLPE Sbjct: 1333 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1788
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.590e-73 Identity = 161/455 (35.38%), Postives = 235/455 (51.65%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMN 1312 K ++ G + K KARLVARGFSQ NVD+ +P +++S+K+++AV E + DVKQ F A L+ +VF++L CG KS ++V+ +A+YG KQ GR + LV N Q K++PCVFR + VV D ++V G +C L A+L F T GE W+ GC+ RD+ G ++ + S++ F+V + W +P ++F ++R R + + A L G L L+VYVD YAD + RRSVSG+A +GG V++ S TQ V+LS++EA+Y+ +G K ALF RAVL F+ P+ SG I +LEDNQGA + +NP S+ R KHID+RYHFIR L + +++ +Q AD+L K L + S + H R LMN Sbjct: 54 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.830e-73 Identity = 170/475 (35.79%), Postives = 243/475 (51.16%), Query Frame = 2 Query: 65 TVCGKVP-TLSVRDG--YLHGKIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGH--SLILSFNV----------------------------------LTWKPSLTFLRLSRQILGLG----------WRMRSCLTSLCARLGR-----------DLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRF 1303 T+ KVP + +V D K DE G + K KARLVA+GF Q + VD+LE F+P A+S ++V+A+ + + + D++Q F+Q+ L++EVFMKL CG+ S ++VRLNK++YG KQ R KRLV L + QS S+PCV R V ++ HVDD++ G + AAL T GE++++LGC+F RD G + S+ + S++ FNV L W + T +S + + W+ + + D + VYVD D+A K+N RRSVSG V++ V S TQ CV+ STSEA+Y+ M G K ALF +L+FL+P R I +LEDN+GA +AENP S+ R KHID+R+HF+R L ++ V + E+Q ADIL K L R FE H F Sbjct: 481 TLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDF 954
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 257 bits (657), Expect = 2.290e-72 Identity = 164/456 (35.96%), Postives = 235/456 (51.54%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGH--SLILSFNV----------------------------------LTWKPSLTFLRLSRQILGLG----------WRMRSCLTSLCARLGR-----------DLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLM 1309 K DE G + K KARLVA+GF Q + VD+LE F+P A+S ++V+A+ + + + D++Q F+Q+ L++EVFMKL CG+ S ++VRLNK++YG KQ R KRLV L + QS S+PCV R V ++ HVDD++ G + AAL T GE++++LGC+F RD G + S+ + S++ FNV L W + T +S + + W+ + + D + VYVD D+A K+N RRSVSG V++ V S TQ CV+ STSEA+Y+ M G K ALF +L+FL+P R I +LEDN+GA +AENP S+ R KHID+R+HF+R L ++ V + E+Q ADIL K L R FE H F + Sbjct: 769 KADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFAL 1223
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 256 bits (655), Expect = 5.760e-72 Identity = 163/456 (35.75%), Postives = 238/456 (52.19%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGH--SLILSFNV----------------------------------LTWKPSLTFLRLSRQILGLG----------WRMRSCLTS-------LCARLGRDLNLSV----YVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLM 1309 K DE G + K KARLVA+GF Q + VD+LE F+P A+S ++V+A+ + + + D++Q F+Q+ L+ EVFMK+ CG+ S+++VRLNK++YG KQ R KRLV L + QS S+PCV R V ++ HVDD++ G + AAL T GE+K++LGC + RD G + S+ + S++ FN+ L W S T +S + + W+ + + L + RD ++ V YVD D+A K+ RRSVSG V + +V S TQ CV+ STSEA+Y+ M G K ALF +L+FL+P + R I +LEDN+GA +AENP S+ R KHID+R+HF+R L ++ V + ++Q ADIL K L R FE H F + Sbjct: 943 KADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDFAL 1397
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE) HSP 1 Score: 254 bits (649), Expect = 7.790e-72 Identity = 166/455 (36.48%), Postives = 241/455 (52.97%), Query Frame = 2 Query: 119 KIDEQGNVTKPKARLVARGFSQHHNVDFLEVFAPRLAASSVKMVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGHSLIL--------SFNVLTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKH-------------------------IDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 1321 K +++G + KARLVARGFSQ NVD+ +P +++S+K+++AV E + DVKQ + A L+ EVF+KL CG+KS +I + +A+YG KQ GR + LV N Q K++PCVFR VV MI+ +VDD++V G +C L A+L +F T GE +W+ GC+ RD+ G + S+ + + + + W +P ++F ++R R + + L G L L+VYVD YAD + RRSV+G+A +GG VV+ S TQ V+LS++EA+Y+ +G K ALF RAVL F+ P+ SG I +LEDNQGA + +NP S+GR KH ID+R+HFI LI + V++ +Q AD+L K L R S + H LMNLPE Sbjct: 591 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHRREISFHRRIEFXVFVFDGSRVARNIDVRFHFIGGLIRSGDISVKFVPTTEQHADLLTKALSRASLKYHRHKLMNLPE 1043 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13855.2363.1 >prot_H-paniculata_contig13855.2363.1 ID=prot_H-paniculata_contig13855.2363.1|Name=mRNA_H-paniculata_contig13855.2363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNback to top mRNA from alignment at H-paniculata_contig13855:69..1559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13855.2363.1 ID=mRNA_H-paniculata_contig13855.2363.1|Name=mRNA_H-paniculata_contig13855.2363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1491bp|location=Sequence derived from alignment at H-paniculata_contig13855:69..1559- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13855:69..1559- >mRNA_H-paniculata_contig13855.2363.1 ID=mRNA_H-paniculata_contig13855.2363.1|Name=mRNA_H-paniculata_contig13855.2363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2160bp|location=Sequence derived from alignment at H-paniculata_contig13855:69..1559- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |