mRNA_H-paniculata_contig13850.2361.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13850.2361.1
Unique NamemRNA_H-paniculata_contig13850.2361.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: D8LIA5_ECTSI (Probable carboxypeptidase Cxp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA5_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 5.330e-101
Identity = 174/292 (59.59%), Postives = 204/292 (69.86%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGY-QSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQE-------------------------------------------------MVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            QVMMP GGAA+RANQKTALA ++HEKKVD  LGD+LR+L+EE   ++  +L+V EAAVVRDA+RDYNHE  KS ELA READVEARAYAAWV AR  GDW AF+P M+E                                                 MV V+R+VA+ATR ELG  Y GC+DQFERGMS ERL+EVF ELK  LVPLLRAIQ+KVA+E+ SGAAA+R+P  LH G+QWG++EQA       ALC+D+AE+LGFDMS+GRLDVSVHPFTGGPGPSDVRITTR
Sbjct:   88 QVMMPAGGAASRANQKTALAAVIHEKKVDAGLGDLLRQLQEEQEGEAASELSVHEAAVVRDAVRDYNHETRKSAELAGREADVEARAYAAWVAARKDGDWEAFAPSMEENGPDILPRFSVAHLPILTLVPRAFFAACSSLRKNNNTKTTTGKNAKLGKMVSVKRDVAEATRSELGGAYEGCLDQFERGMSTERLREVFGELKAGLVPLLRAIQEKVAKEDKSGAAAERHPTPLHSGEQWGKDEQA-------ALCRDMAEKLGFDMSKGRLDVSVHPFTGGPGPSDVRITTR 372          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A836CFE7_9STRA (Putative carboxypeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE7_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.510e-65
Identity = 129/243 (53.09%), Postives = 167/243 (68.72%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKV-AEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            QVMMP G A AR+ QK+ALAG + EK+    LG ++ +L          L  ++AAVVRDA+RD++HE+ KS+++AAREA++E RAY AWV+AR + DW AF+P++ EMV ++ EVA ATRPE+G VY   +D FERGMSRERL EVF ELK  L PLL AI  K+ A+ +SSG ++     AL P   W  ++Q        ALC+ IAE+LGFD+  GRLDVS HPFT G  P+DVRITTR
Sbjct:   85 QVMMPSGAAKARSMQKSALAGAVFEKRTAADLGALVSELRRADTTDV--LGAEKAAVVRDAIRDFDHEMRKSKDMAAREAELEGRAYHAWVKARKENDWPAFAPLLSEMVHLKSEVAAATRPEMG-VYDANIDVFERGMSRERLAEVFTELKAGLTPLLSAILDKIKADGDSSGDSSG----ALSPSPSWEVKKQ-------EALCRQIAEKLGFDLEHGRLDVSPHPFTSGFHPTDVRITTR 313          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S1XPI5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPI5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.160e-60
Identity = 117/245 (47.76%), Postives = 154/245 (62.86%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPEL---GNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            Q MMP G AA+R  QK ALA +L  +K    L ++L +L  EG          + AVVR+A R+++     S+EL AREA+VE+R Y  W  AR   DW +F+PV++E+++V+ E+A A RP+L   G +Y   VD+FERGMS ERL EVF ELK  LVPLLR++Q       ++   A   P  L PGD W  E+QA       ALC+++A  LGFD  +GR+DVS HPFTGGP P+DVRITTR
Sbjct:   47 QTMMPAGAAASRGAQKVALATLLFAEKTSSELEELLDQLSGEGALEAD----AQRAVVREARREFDLATKVSKELVAREAEVESRGYQTWDAARKANDWASFAPVLEEIIEVKNEIAAAQRPDLAAEGRLYDAHVDKFERGMSAERLDEVFSELKAGLVPLLRSVQ-------AAAGDAPATPACLEPGDAWDVEQQA-------ALCREVAADLGFDFEKGRMDVSSHPFTGGPHPTDVRITTR 273          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S3EEB4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EEB4_9RHOD)

HSP 1 Score: 196 bits (498), Expect = 1.720e-58
Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            QVM+P GG  AR  QK ALA  LH+K+ D +LG+++   E +    G    + E A VRDA   Y+     S+ELAAREA++    + AW +AR + D+  F+PV+QE+VD+R+E+A  T+PE  + Y  C+D FERGM+  RL E+FDELK  LVPLL  I+  +        A    P  L   + W  ++QA        L + IAE LGFD  RGRLDVSVHPFTGG  P+DVRITTR
Sbjct:   64 QVMLPEGGMTARGKQKAALAATLHDKRTDSKLGELIATAESDVQALG----LMEQANVRDARIAYDRHTKLSRELAAREAELGVEGFIAWKKAREESDFSIFAPVLQEIVDLRKEIASVTKPEW-DAYDACIDLFERGMTSARLTEIFDELKAGLVPLLNEIRGALE-------AQPELPSGLKGSEDWDTKKQAE-------LSRQIAEALGFDFQRGRLDVSVHPFTGGSDPADVRITTR 286          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S0YX82_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YX82_9CRYP)

HSP 1 Score: 190 bits (483), Expect = 1.090e-56
Identity = 102/242 (42.15%), Postives = 149/242 (61.57%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            Q MMP G   ARA Q+ ALA ++HE K DP +G++L+KL+         L   +AA +R A   Y+     S  LAAR+A++E+RAY AW  AR + DWGAF+P ++E+ +++RE+   T+P++  +Y   +D F+  M+  R+KE+FD++K EL PL+ +I  KV  E S        P  L  G +W  ++Q         LC++IA  +GFD ++GR+DVSVHPFTGG   +DVRITTR
Sbjct:    4 QTMMPQGAEEARAKQQAALAAVIHEAKTDPTIGELLKKLKPHASS----LPPFDAANLRIASERYDQTSRMSSALAARQAELESRAYGAWTRARAESDWGAFAPTLKEVFEMQREICSTTKPDMP-IYDAAIDMFDPKMTAPRIKEIFDQVKAELAPLISSIAAKVEAEPS----LHEVPAPLQGGPEWDTKKQ-------DELCREIAAAIGFDFAKGRMDVSVHPFTGGSHTTDVRITTR 229          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S3EEB6_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EEB6_9RHOD)

HSP 1 Score: 196 bits (498), Expect = 6.250e-56
Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            QVM+P GG  AR  QK ALA  LH+K+ D +LG+++   E +    G    + E A VRDA   Y+     S+ELAAREA++    + AW +AR + D+  F+PV+QE+VD+R+E+A  T+PE  + Y  C+D FERGM+  RL E+FDELK  LVPLL  I+  +        A    P  L   + W  ++QA        L + IAE LGFD  RGRLDVSVHPFTGG  P+DVRITTR
Sbjct:   64 QVMLPEGGMTARGKQKAALAATLHDKRTDSKLGELIATAESDVQALG----LMEQANVRDARIAYDRHTKLSRELAAREAELGVEGFIAWKKAREESDFSIFAPVLQEIVDLRKEIASVTKPEW-DAYDACIDLFERGMTSARLTEIFDELKAGLVPLLNEIRGALE-------AQPELPSGLKGSEDWDTKKQAE-------LSRQIAEALGFDFQRGRLDVSVHPFTGGSDPADVRITTR 286          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S2KNN7_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KNN7_BIGNA)

HSP 1 Score: 193 bits (490), Expect = 3.920e-55
Identity = 114/243 (46.91%), Postives = 145/243 (59.67%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEA-AVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            Q MMP G A  R  QK+ LA ++HEK+ DP LG +L     E  + G +L    A A  RDA RDY  E  KS+E+A REA++EA ++ AWV+AR   D+  F P + EM  +++EVAK TRP L  +Y G +D FERGM   RL ++F ELK +LVPL++++            A D   PA      W  + QA        LC +IA+ LGFD  RGR DVSVHPFTGG GPSDVRITTR
Sbjct:   27 QTMMPSGAAGTRGQQKSVLAAVIHEKQTDPALGQLL-----EDIKGGEELECDFARANCRDAQRDYKLETAKSKEIARREAELEAESFNAWVQARKDDDFNGFEPKLTEMFQLKKEVAKLTRPHLP-IYDGALDAFERGMPSTRLDDIFGELKKDLVPLVKSVID----------AGDMKLPAALTDAAWPVDTQAE-------LCLEIAKDLGFDTERGRFDVSVHPFTGGVGPSDVRITTR 246          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S0HKF9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HKF9_9CRYP)

HSP 1 Score: 195 bits (495), Expect = 3.940e-55
Identity = 109/242 (45.04%), Postives = 152/242 (62.81%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            Q MMP G   ARANQK  LAG+LHE KVDP +G++L  LE++  Q G D    + A +R+    Y      S ELA+REA +E+  YAAWV+AR   D+ +F P+++EM D+R+E+   T+P++ ++Y   VD F+  M  ERL+ +FDE+K EL P++ AI+++VA    +        PAL  G  W   +QA        +CK+IA+ +GFD   GR+DVSVHPFTGG  P+DVRITTR
Sbjct:  111 QTMMPAGAEGARANQKAVLAGVLHEAKVDPAIGELLSSLEQK--QEGLDEF--QRANIRECKTRYERSTRMSAELASREAHLESTCYAAWVKARENSDFRSFVPMLKEMFDLRKEILTLTKPDM-SLYDAAVDSFDPRMKMERLEVIFDEVKRELTPMIEAIKQRVA----ADPKLQEVHPALRGGADWETGKQAE-------MCKEIAKAIGFDFELGRMDVSVHPFTGGTHPTDVRITTR 336          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S0DL71_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL71_9EUKA)

HSP 1 Score: 192 bits (487), Expect = 4.460e-54
Identity = 111/243 (45.68%), Postives = 154/243 (63.37%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTVQEA-AVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            Q MMPPG A++R  QK ALA I+HEK+ D  L  ++++L+E     G+ L  + A A  RDA RDY+ E  KS+E+A  EA++EA  +  WV AR + DW A  P +++M D++RE+AKATRP+L   Y G +D FERGM   +L  +F +LK +LVPL++ +         + A   + PP L   D +  ++QA        +C +IA+ +GFD+SRGR DVS HPFTGG GPSDVRITTR
Sbjct:  102 QTMMPPGAASSRGQQKAALAAIIHEKQTDENLASLIQELQE-----GKHLNCEFARANCRDAKRDYDLESSKSKEMAKLEAELEADCFNTWVTARKENDWKAMEPKLKKMFDLKREIAKATRPDLPT-YDGALDAFERGMPSSKLDSIFSQLKKDLVPLVKEV---------TSAKGYKIPPELKDHD-FDVKKQAE-------MCIEIAKDIGFDISRGRFDVSAHPFTGGVGPSDVRITTR 321          
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Match: A0A7S0XIP3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIP3_9RHOD)

HSP 1 Score: 185 bits (469), Expect = 1.600e-53
Identity = 107/243 (44.03%), Postives = 148/243 (60.91%), Query Frame = 1
Query:    1 QVMMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRD-LTVQEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAFSPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELKTELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWISALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR 726
            QVMMP G A AR  QK A+A +LH+K     L D + +L+  G +S    L   E A VRDA R +  +   S+ELAAREA++ +RAY  WVEAR K D+  F+PV++E+++  + VA  T+P + + Y   +D+FERGMS  RL E+FD L+  L  LL      +   +S+G A +    AL  G QW +++Q          C+++A  +GFD +RGRLD SVHPFTGG GP DVR+TTR
Sbjct:  117 QVMMPVGSAEARGRQKAAVAAVLHDKHTGASLADAINELKTFGSESVEAVLDEYERANVRDATRRFERKQRMSRELAAREAELTSRAYQVWVEAREKSDFSMFAPVLEELLEHTKLVASLTKPGM-DAYDAAIDEFERGMSAARLSEIFDSLREPLKALL----DDILAAQSAGRAPNEPVNALQGGPQWDEDKQ-------EVFCREVAAAVGFDSTRGRLDRSVHPFTGGCGPQDVRMTTR 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13850.2361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIA5_ECTSI5.330e-10159.59Probable carboxypeptidase Cxp n=1 Tax=Ectocarpus s... [more]
A0A836CFE7_9STRA2.510e-6553.09Putative carboxypeptidase n=1 Tax=Tribonema minus ... [more]
A0A7S1XPI5_9STRA5.160e-6047.76Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3EEB4_9RHOD1.720e-5846.28Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0YX82_9CRYP1.090e-5642.15Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3EEB6_9RHOD6.250e-5646.28Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S2KNN7_BIGNA3.920e-5546.91Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
A0A7S0HKF9_9CRYP3.940e-5545.04Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0DL71_9EUKA4.460e-5445.68Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0XIP3_9RHOD1.600e-5344.03Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13850contigH-paniculata_contig13850:2142..6811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.0
Seed ortholog evalue7.6e-84
Seed eggNOG ortholog2880.D8LIA5
KEGG koko:K01299
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Carboxypeptidase Taq (M32) metallopeptidase
EggNOG OGs2QQRM@2759,COG2317@1
Ec32 ortholog descriptionPeptidase M32, carboxypeptidase Taq metallopeptidase
Ec32 orthologEc-24_001420.1
EC3.4.17.19
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons5
Model size729
Cds size723
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13850.2361.1prot_H-paniculata_contig13850.2361.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13850 2148..6811 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929101.0784712-UTR-H-paniculata_contig13850:2141..21471622929101.0784712-UTR-H-paniculata_contig13850:2141..2147Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13850 2142..2147 +
1691480731.6018445-UTR-H-paniculata_contig13850:2141..21471691480731.6018445-UTR-H-paniculata_contig13850:2141..2147Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13850 2142..2147 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929101.0926306-CDS-H-paniculata_contig13850:2147..22761622929101.0926306-CDS-H-paniculata_contig13850:2147..2276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 2148..2276 +
1691480731.61389-CDS-H-paniculata_contig13850:2147..22761691480731.61389-CDS-H-paniculata_contig13850:2147..2276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 2148..2276 +
1622929101.1070802-CDS-H-paniculata_contig13850:2710..28991622929101.1070802-CDS-H-paniculata_contig13850:2710..2899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 2711..2899 +
1691480731.6227818-CDS-H-paniculata_contig13850:2710..28991691480731.6227818-CDS-H-paniculata_contig13850:2710..2899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 2711..2899 +
1622929101.1181421-CDS-H-paniculata_contig13850:3659..38301622929101.1181421-CDS-H-paniculata_contig13850:3659..3830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 3660..3830 +
1691480731.6320267-CDS-H-paniculata_contig13850:3659..38301691480731.6320267-CDS-H-paniculata_contig13850:3659..3830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 3660..3830 +
1622929101.1297524-CDS-H-paniculata_contig13850:4584..46921622929101.1297524-CDS-H-paniculata_contig13850:4584..4692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 4585..4692 +
1691480731.6412299-CDS-H-paniculata_contig13850:4584..46921691480731.6412299-CDS-H-paniculata_contig13850:4584..4692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 4585..4692 +
1622929101.1433246-CDS-H-paniculata_contig13850:6685..68111622929101.1433246-CDS-H-paniculata_contig13850:6685..6811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 6686..6811 +
1691480731.6514013-CDS-H-paniculata_contig13850:6685..68111691480731.6514013-CDS-H-paniculata_contig13850:6685..6811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13850 6686..6811 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13850.2361.1

>prot_H-paniculata_contig13850.2361.1 ID=prot_H-paniculata_contig13850.2361.1|Name=mRNA_H-paniculata_contig13850.2361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
MMPPGGAAARANQKTALAGILHEKKVDPRLGDVLRKLEEEGYQSGRDLTV
QEAAVVRDALRDYNHEVLKSQELAAREADVEARAYAAWVEARGKGDWGAF
SPVMQEMVDVRREVAKATRPELGNVYSGCVDQFERGMSRERLKEVFDELK
TELVPLLRAIQKKVAEEESSGAAADRYPPALHPGDQWGQEEQASSGSWIS
ALCKDIAERLGFDMSRGRLDVSVHPFTGGPGPSDVRITTR*
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mRNA from alignment at H-paniculata_contig13850:2142..6811+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13850.2361.1 ID=mRNA_H-paniculata_contig13850.2361.1|Name=mRNA_H-paniculata_contig13850.2361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4670bp|location=Sequence derived from alignment at H-paniculata_contig13850:2142..6811+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGATGATGCCGCCAGGGGGGGCAGCAGCCAGGGCGAACCAGAAAAC AGCGCTAGCGGGGATCCTCCACGAGAAGAAGGTGGACCCCAGGCTCGGCG ATGTTCTTCGCAAGCTCGAGGAAGAAGGATACCAGGTAAGATTTCGTGGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTCGTTGCTGCTGCTGCTCTTGCTCTT GCTGCTGCTGCTGCAGTCAGTTTCTCTGCTAGTGCCTGTGTATCCTCCGA ATCTTGATCCAGGTGTCGTGCTTGTAGCCACCGTTTCTGTGTTGTTTTTT TCAATCAGTCGCTTGGTCTTATGCTCTAGAGCTATGTATCATTGTCATTG ATTTAAACATGTTTTGTTATTGCATTGGATTGTGCTTGCAAGAAACATGC GCGCAGGCGTAGTCTCTCCCTCTCTCTCGTCACAAGCCACCGACATGCTG CCGCTCATTAGCCGCGATACGTTCGCCCCTGCCTCCCCCCCCCCCCCCCC GGCCTATTGTCACCTGCAGTCAGGTAGAGATCTCACGGTGCAAGAAGCTG CTGTCGTGCGCGATGCGCTCCGTGACTACAACCACGAGGTCCTCAAGTCT CAGGAGCTGGCAGCAAGGGAGGCGGACGTTGAGGCAAGAGCTTATGCCGC CTGGGTGGAAGCCCGAGGGAAGGGGGATTGGGGGGCCTTTTCGCCCGTCA TGCAAGAGGTGGGTCGTGATATGATGGTGGTGATGGTCGTTCTGGTGTAT TCTCGTGCATCCACCCGGGATCGATAAAATTGTCTCGTGTGTTTGGTGTG TTTGTTTTATTTTCTCTGGATGTCTGCGAAGGGCCGCTTGTGTTGACTGT TGCCGTGAATGCAGTTGACTGTTGCCGTGAATGCAGTTGTCGTCTGAGCG TTGTTCGTTTGGTGTACTCGAGCAATTTCCATGTATCTGTAGGATTATTA CGTGCATGCCTCGAATCGCAGGCTATAGATAATTTGGCCATCATCCAGAC TCGAAAGTAGGTAAAAAAGCTGTTACGACAAGGGGACAGAAACGCCACTA GACCTTGTGTAGGGGATCGGACTTCAGGAATCCCAGGAACGCTAGGAACC CCAGGAGCGTTCTCTTTACAAATGAATAGGTATATAAACGAAGTGAAGAA ATAGCGCCGTAAAAGCGAACGCCTGACTCGAGTAACATAGTACGCTACGA TAACTTCGCGGTATTGTGTTCAGTGGGTCGTCGAAGTATTTCATTCGTCT CGCGCGCTTCACCTGTCCTGGGACTACCCGTTTCGTTGCAGCGTTGTTTG ATCCTTGTTGGTGTAACAAGATTTTGTGTTTTGATTCCTTGTTGGTGGGA TGTATACTTTATAGTATGGTACTCCCACAACTGATGGAAGATAGTCAGAT ATTGTAGTGAATACATTTATGAAGGTATCACGACCGTGCGACCTTACGCT TTTCTGCCGGCACCGCAGATGGTGGACGTTCGAAGGGAGGTGGCAAAGGC GACGAGGCCCGAGCTGGGCAATGTCTACTCAGGTTGCGTGGATCAGTTCG AGCGGGGCATGTCTCGAGAGAGACTGAAAGAAGTGTTCGACGAACTCAAG ACGGAGCTCGTGCCTCTATTGAGAGCTATCCAGAAGAAGGTGTGCGCCTG TGCCCCCGAATGTACGCCTGCGCATCCGCTTGAGTGCTGTTGGCCGAACG TATGTGCCTGTATGCGTGCTTTCGTTTTAGACGAAGACAAAGGGGGGTTT CCCGCACGTGAAGGTTGCCTTTTTTTCTTGAGGACTCAACACGTATCGGG ACGGAACGGGACGGAACGGAACGGAATGGAACGGAGCAAGGGGATTTAAT CTTTCAATGCAAACGGACGAGTCACGGAGAGTGCAGAATTGATTGCACTG GACCGGACCGGACCGGACCGGGGTCTCGTCCATCCAGGAACGATGGGACG GGACAGGACCATGTCCCAATCCGACCCAACCCGCGAAAGTCCCATGGTCC TTCGACAAGCGTTGTCTTATTTCAAAAGGAAGATCGGGGAAAGAGGGAGG AGTAAGAGCCGCGTGTATTGGCCATTTTACTCGTCATAGCTTTCGCTGCC TCTGCCTTCAAACACCGCCCATGCAGGCTCTCTGTGGTGTGCGCGTACCA CCTTTTGCCCAGCGAAGTGGTCAGGTGTACAAAAAACCTTTGCCTCCGAT CGCGGATGGCTGATGGAGCTCTATGCCTCTCCGAGAAAAACAAGATCGAT ACAAGAAGTGCTATCATCTGGGAACTGGGAGCGATTCTCGTGGAGCGATG CGATTTGGTATGCGGTGTATGCTTTTTGTTTAAGACAAGTAGTGGTGACA TCTGTTGTGTTATCGTTTATCCGTGCCTCGGTGACGCAAGCAGGTGGCAG AAGAGGAGAGCTCGGGAGCCGCGGCAGACCGGTATCCGCCAGCTCTACAT CCGGGCGACCAGTGGGGTCAAGAGGAACAGGCAAGCTCTGGCTCATGGAT AGTTACGCTTGGATTGATTTCTGCTGTGCTACTGCTACACCTTGACTGAA CGCGGGTGGTGCCACCATCTTTATTTTATGGTCCTTGAAACACATGATTC ATCTGTTTGATGAGGATATTTAGTCATTTGAATGGCTGTATATATCTATC AATCACGAAAAAAATGGGTCTGTGTGCGTTGATCGTCTAACCTCTACGAT TAATCAGTGAATTTTGGTCGCTTGGTGTCGTAGCCAACATACCAATGTTT TATATGTATATGTACGATCTATGTACATAGGCAGGTGACGCTTACATATT GCGGTTAAATTGGCATATGCTAGCGAGCGGAAATCGTGAGCCTAACGACC TTCGACACCTGGTGAATGGGCCTCGCCGGATATATATATATATATATATA TATACCGACTTTAATGACCCTTCAAGTCTGAGCCAAAAATCTGTGGATTA TGACCGTAACTTGTGGGCCATGACCATTACAGATGAGGGAGGAAAATATT GAGATATTGATCCGATGGCTTGACAGGTACGCGTGTTGGACAGGAGCGAA GCTGGCATCCGGGTACACATCTACTATGAGTAAAGAATATGTGTAGAAAA TAGCCGAAGCTCGGGGAAGGGGAGAGCAAGGGTAACATGCGCGGGTATTC TAAGCTTCTTTGCCATTATTCCAAGGGGGGATTCTCCCGTCTATTGTTGG AGAAAAATCGATTCTGCTGATGAGGATAGACATGAAAAAAGCCGCAAGTC GTGTGGGCCACGCAAAAGTCCGCAAGATATAGATGCGGCATTGGAAATAG GGAGATTCTACCATTCGGAGCGATTAGATTCTTTAGAGCTCGTGCGGGTC ATTAAAAAAAAAAAAAAAATTAACCCCCGGAAGGCTAAGGCCAAAACCTC TATCCGATGCTTCCATACCTAAGTACGACTACATTTCCTTTTACAGAACA TAGTTATTTGTTCCTCTGCCGGGTAGGCGCCACCCCGTTTCGGCTAAACC AGGTAGGCAGTGTGGGGGTTGCACCCACTAAAAGACCTTTGACTAGTCTT CCAGTCATGCTCAGTTCACGAGCTACCCTACCCGTTCGGGCGTAGGTCCG TAGTCGTGCGGGTCATTTACACCGATAATCGGCATATATCGGCACATTTT TTTGTCCGTATATCCTATTTGACGCATTTTTGAACTAATGATCTACACGA GCTGTTACCTATCACGGTCCGGACAAGTTTGCCGGCAGCTGCAGATCTGT AGCATACGGATCATGAGCACACGTTTGGCCACAATTGATTCGTACCCCGC GGATGGTAAGCATATACTTTCTCTGTGCCATAAGTATAATCGATTGGTTG AGTTTTTAGCATCTCCGATTTTTTTTTTAGTTATCATCCTACTAATAAAC GTTTTTGGGGTTGATCCCCAAAATTTCACGGAAATTGGCAAAGTCCATTG GGTGCACGTATGGCGCAAAGAAAATAAATCGGCGGAAAAAAAGAAAAAAA AAACGTGACACAACAATGGTCTAAATTAGCCCACCCTTGAGCAGGCATTA ATCTTGATACAAGTATCGGATTGCACTTCGGAATAGCGCGCAAGAGTATT AGATCTTAGCCTCCCAACGATTCCACCCGTAGCCTTTGAAAAGCTTTTTT TATATGTGGAGACATGATCTGCCAAACTCAACCGCCTCTACTTATGGCAC AGAGGAAGTACATATTCATCCACAACTGATCGATATGATTCGCATAATTA GCGCACGCTTGTCCGCGGCTGATCCATACGAGGCGAAAACCGATGTTGAC CGGTCCGAGTCGTGGGAAATCTTCTCCTCCCCTTACCCTACGTGCTGTAT CCTCCGAGGACGCGTGGTCAAAGGTTCAACAATTACAGCATGCAACTGAT GAGAACGCCCCCCCCCCTCTCCCCTTCCCCCCCCCCCCCCCCCTCTCGTA AACTATGCTTGGAATCCTGTAAACGTGACCCTTCGTTGTGAAAGTCTGCC CTGTGCAAAGACATCGCGGAACGTCTGGGTTTTGACATGAGCAGGGGGCG TTTGGATGTGTCCGTTCACCCTTTCACCGGGGGCCCTGGTCCTTCAGACG TACGGATAACGACCAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig13850:2142..6811+

>mRNA_H-paniculata_contig13850.2361.1 ID=mRNA_H-paniculata_contig13850.2361.1|Name=mRNA_H-paniculata_contig13850.2361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig13850:2142..6811+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCCGCCAGGGGGGGCAGCAGCCAGGGCGAACCAGAAAACAGCGCT
AGCGGGGATCCTCCACGAGAAGAAGGTGGACCCCAGGCTCGGCGATGTTC
TTCGCAAGCTCGAGGAAGAAGGATACCAGATGATGCCGCCAGGGGGGGCA
GCAGCCAGGGCGAACCAGAAAACAGCGCTAGCGGGGATCCTCCACGAGAA
GAAGGTGGACCCCAGGCTCGGCGATGTTCTTCGCAAGCTCGAGGAAGAAG
GATACCAGTCAGGTAGAGATCTCACGGTGCAAGAAGCTGCTGTCGTGCGC
GATGCGCTCCGTGACTACAACCACGAGGTCCTCAAGTCTCAGGAGCTGGC
AGCAAGGGAGGCGGACGTTGAGGCAAGAGCTTATGCCGCCTGGGTGGAAG
CCCGAGGGAAGGGGGATTGGGGGGCCTTTTCGCCCGTCATGCAAGAGTCA
GGTAGAGATCTCACGGTGCAAGAAGCTGCTGTCGTGCGCGATGCGCTCCG
TGACTACAACCACGAGGTCCTCAAGTCTCAGGAGCTGGCAGCAAGGGAGG
CGGACGTTGAGGCAAGAGCTTATGCCGCCTGGGTGGAAGCCCGAGGGAAG
GGGGATTGGGGGGCCTTTTCGCCCGTCATGCAAGAGATGGTGGACGTTCG
AAGGGAGGTGGCAAAGGCGACGAGGCCCGAGCTGGGCAATGTCTACTCAG
GTTGCGTGGATCAGTTCGAGCGGGGCATGTCTCGAGAGAGACTGAAAGAA
GTGTTCGACGAACTCAAGACGGAGCTCGTGCCTCTATTGAGAGCTATCCA
GAAGAAGATGGTGGACGTTCGAAGGGAGGTGGCAAAGGCGACGAGGCCCG
AGCTGGGCAATGTCTACTCAGGTTGCGTGGATCAGTTCGAGCGGGGCATG
TCTCGAGAGAGACTGAAAGAAGTGTTCGACGAACTCAAGACGGAGCTCGT
GCCTCTATTGAGAGCTATCCAGAAGAAGGTGGCAGAAGAGGAGAGCTCGG
GAGCCGCGGCAGACCGGTATCCGCCAGCTCTACATCCGGGCGACCAGTGG
GGTCAAGAGGAACAGGCAAGCTCTGGCTCATGGATAGTGGCAGAAGAGGA
GAGCTCGGGAGCCGCGGCAGACCGGTATCCGCCAGCTCTACATCCGGGCG
ACCAGTGGGGTCAAGAGGAACAGGCAAGCTCTGGCTCATGGATATCTGCC
CTGTGCAAAGACATCGCGGAACGTCTGGGTTTTGACATGAGCAGGGGGCG
TTTGGATGTGTCCGTTCACCCTTTCACCGGGGGCCCTGGTCCTTCAGACG
TACGGATAACGACCAGGTGATCTGCCCTGTGCAAAGACATCGCGGAACGT
CTGGGTTTTGACATGAGCAGGGGGCGTTTGGATGTGTCCGTTCACCCTTT
CACCGGGGGCCCTGGTCCTTCAGACGTACGGATAACGACCAGGTGA
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