mRNA_H-paniculata_contig13837.2353.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A6H5KUD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUD6_9PHAE) HSP 1 Score: 302 bits (774), Expect = 2.260e-101 Identity = 154/205 (75.12%), Postives = 172/205 (83.90%), Query Frame = 1 Query: 4 RATRGRSSS----LRMQSA--SVALDTVEQAQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPDYTITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAREAVLGFEFPYNQGESKVQPGFTFMDVSDQYVLARGAGGGLALWLRQDSV 600 RA RGRS S RMQ A + AL+T+E AQ +I+ AA+ +D DPD VIEAIRLIEK GGSK +EGR QPKFDLLTDNGNWRL+FTTGD KTQKK+GGKISYVPIKAVQVFNPDYTITNGVYLGSFP+LKF+GTFTW EE +RLEFTFN+ VLG FPYNQGESKV PGFTFMD+SD+YV+ARGAGGGLALWLRQD+V Sbjct: 65 RAGRGRSGSGGLRPRMQGAPAAAALETIEDAQTVIVRAAETRDVDPDTVIEAIRLIEKSGGSKKPLEGRDSSQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYTITNGVYLGSFPVLKFSGTFTWAEETARLEFTFNEV--GVLGLNFPYNQGESKVPPGFTFMDISDRYVIARGAGGGLALWLRQDTV 267
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A7S3XXW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXW0_HETAK) HSP 1 Score: 140 bits (353), Expect = 3.260e-39 Identity = 73/127 (57.48%), Postives = 93/127 (73.23%), Query Frame = 1 Query: 214 DLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAREAVLGFEFPYNQGES-KVQPGFTFMDVSDQYVLARGAGGGLALWLR 588 DL +G W+LVFTTGDKKT+K G +I+Y P+KAVQ F+ ITNG++LG F LLKF GTFTW++E++RLEF F+K AVLG EF + Q E KV P F F+ + ++ V+ARGAGGGLALW R Sbjct: 19 DLERVSGCWQLVFTTGDKKTEKNFG-RINYFPVKAVQCFDAQTMGITNGIFLGDFALLKFFGTFTWIDERTRLEFDFDKV--AVLGLEFGFGQKEPPKVPPAFNFIAIEEKIVVARGAGGGLALWRR 142
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A7S2UXG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXG6_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.660e-36 Identity = 77/196 (39.29%), Postives = 108/196 (55.10%), Query Frame = 1 Query: 61 DTVEQAQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNP-DYTITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNK-------------------AREAVLGFEFPYNQGESKVQPGFTFMDVSDQYVLARGAGGGLALWLR 588 + +E + ++ AA K +DPD VIEA+ +EK ++ G + L NG+WRL+FTTG TQKK+G K++Y PIKAVQ FN D++I NGVYLG F L+KF G F W+E+ RLEF F++ + LG E ++ +P F ++ +D+ ARG GGGLALW R Sbjct: 74 EQIESSTSMLQKAAMTKKEDPDQVIEALLNLEKLQRKLNKLDD--GATSRETLQKLNGSWRLIFTTGTADTQKKLGRKVNYFPIKAVQSFNTTDFSIENGVYLGDFSLIKFGGDFEWIEKPRRLEFDFDRISLLGLPAFNLPKGGAAEIGKSTGLGAERNVEMVKAGAKPFFNWISANDEIATARGGGGGLALWKR 267
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A1Z5KMF9_FISSO (PAP_fibrillin domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMF9_FISSO) HSP 1 Score: 124 bits (311), Expect = 8.400e-32 Identity = 80/207 (38.65%), Postives = 111/207 (53.62%), Query Frame = 1 Query: 19 RSSSLRMQSASVALDTVEQAQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPD-YTITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAR-------------EAVLGFEFPY---NQGESKVQPGFTFMDVSDQYVLARGAGGGLALWLR 588 RSS L + +VA ++E L+ AA+ K +D +AV +A+ +EK+ A + + E +L NG+WRL+FTTG K TQK+ GG+I+Y P+KAVQ F D I NG+Y G FP LKF G F + + +LEF FN+ A LG + N +K +P F ++ D ARG GGGLALW R Sbjct: 29 RSSFLCLSETTVAEPSLEDNLALLKRAAETKQEDSEAVFDALSALEKQMRQVAREDPKIAESVLENL---NGDWRLIFTTGTKDTQKRTGGRINYFPLKAVQSFRTDGMKIENGIYFGDFPALKFGGEFEFSLKSRKLEFDFNRVTLFGLFDIKLGQKDAAELGAKSGLGSKNNVTNKRKPFFNWISADDSIATARGGGGGLALWKR 232
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A7S0EPI4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPI4_9EUKA) HSP 1 Score: 122 bits (305), Expect = 1.210e-30 Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 64 TVEQAQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAREAVLG---FEFPYNQGES--------------KVQPG----FTFMDVSDQYVLARGAGGGLALWLR 588 +V+ A L AA ++ DPD V E + +EK G + + GGE + L + +G WRLVFTTG + Q K+G K+ Y P++A Q F+ ITNG+Y+GSF L++F G+F W+EE+ R+EF F+ R AVLG F+ P E + + G F ++ + ARG GGGLALW R Sbjct: 55 SVDSALALCRVAATSREADPDTVCEEMLTVEK--GMRDTAKDDGGELSRSTLQSLDGAWRLVFTTGTVEMQSKLGRKVDYFPLRATQTFDTKTNAITNGIYIGSFALVRFFGSFEWLEERRRVEFDFD--RIAVLGLPAFDLPKGGAEELGAATGLGAKSNVKRAEDGKKAFFNWISADAEIATARGGGGGLALWQR 247
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A7S4DT06_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DT06_9EUKA) HSP 1 Score: 125 bits (315), Expect = 2.810e-30 Identity = 72/186 (38.71%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 85 LILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPDYTITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAR-------------EAVLGFEFP---YNQGESKVQPGFTFMDVSDQYVLARGAGGGLALWLRQD 594 ++ AA+ +D DPD V AIR +E+ E+ + LL G W+LVFTTG KTQ+ G I+Y P+KA+Q F ITNG++ G PL + GT+ W+ +SRLEF FN ++LG + YN+ QP F F+ V D+ ++ARGAGGG+ALW+R+D Sbjct: 359 VLRDAAQDRDVDPDQVYAAIRALER-------------EKLQVPLLAVKGTWKLVFTTGTAKTQRDFG-PINYFPVKAIQTFGDGDVITNGIFAGPLPLFRLKGTYKWLAFRSRLEFDFNDVEAFGVYTPELPDPLRSILGLKVDGKDYNK-----QPAFNFIAVDDKVLVARGAGGGVALWVRED 525
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A7S2WPX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPX1_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.330e-29 Identity = 76/190 (40.00%), Postives = 102/190 (53.68%), Query Frame = 1 Query: 82 ELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPD-YTITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAREAVLGFEFPYNQG--------------------ESKVQPGFTFMDVSDQYVLARGAGGGLALWLR 588 E ++ AA+ + +D D V+EA+ +EK G A E + L NG WRLVFTTG +QKKIGG+I+Y PIKAVQ F+ +TNG+YLG+FP+LKF G F + +LEF F + AVLGF +G E+ +P F ++ + ARG GGGLALW R Sbjct: 68 ETLVRAAETRAEDSDVVLEALLDLEK-GMRTIAREDPTAAEATLSSL--NGAWRLVFTTGTVDSQKKIGGRINYFPIKAVQCFDTSTMRLTNGIYLGTFPILKFFGPFEFNLASRKLEFDFTEI--AVLGFRVGLGKGGASDIGSKTGLGSENNKKLVEAGKKPFFNWISADRRIATARGGGGGLALWAR 252
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A813D251_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D251_POLGL) HSP 1 Score: 116 bits (290), Expect = 2.020e-28 Identity = 75/195 (38.46%), Postives = 109/195 (55.90%), Query Frame = 1 Query: 61 DTVEQAQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAR------------EAVLGFEF--PYNQGESKVQPGFTFMDVSDQYVLARGAGGGLALWLRQDSV 600 + ++++ ++ +A K+ P+ V EAIR++EK + R G+ LLT G WRL++TTG KKT++++G +ISYVPI AVQ F+ + I NG+YLG L +F GT W+E R+EF F + A+ G PY K QP F F+ V ++ ARGAGGG+ALWLR + V Sbjct: 80 EDLQKSLSILAESALTKNTPPEEVYEAIRVLEK-------AKDRDGDSGFEQLLT--GEWRLIYTTGTKKTEEEVG-RISYVPITAVQRFDMGKSLIRNGIYLGPLSL-EFEGTLRWIEATRRMEFDFEDLKICGSSVLLPDWLRAMAGMRSSTPY-----KKQPAFNFVAVDEKIAAARGAGGGVALWLRNELV 258
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A1Q9F481_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9F481_SYMMI) HSP 1 Score: 115 bits (288), Expect = 4.720e-27 Identity = 71/185 (38.38%), Postives = 107/185 (57.84%), Query Frame = 1 Query: 70 EQAQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAREAVLGFEFP-YNQGES--------KVQPGFTFMDVSDQYVLARGAGGGLALWLRQD 594 E A+ + +A ++ P+ V EAIR++EK + R G+ LT G+WRL++TTG KKT+ +IG +++YVPI AVQ F+ + I NGVYLG L +F G F W+E+ RLEF F + + + P + +G + K QP F F+ + ++ ARGAGGG+ALW+R + Sbjct: 221 EAARATLAESALTRETSPEDVFEAIRVLEK-------AKNRTGDSGFTKYLT--GDWRLIYTTGTKKTEDEIG-RVNYVPITAVQRFDMEKKFIRNGVYLGPISL-EFEGGFRWIEDLRRLEFDFEELKVCGYSLDLPDWLRGMAGMKSSKPYKKQPAFNFVAIDEKIAAARGAGGGVALWVRNE 394
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Match: A0A7S2TG87_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TG87_9EUKA) HSP 1 Score: 110 bits (275), Expect = 1.850e-26 Identity = 70/185 (37.84%), Postives = 98/185 (52.97%), Query Frame = 1 Query: 76 AQELILSAAKLKDQDPDAVIEAIRLIEKKGGSKAAIEGRGGEQPKFDLLTDNGNWRLVFTTGDKKTQKKIGGKISYVPIKAVQVFNPD---YTITNGVYLGSFPLLKFAGTFTWVEEKSRLEFTFNKAREAVLGFEFP-------------YNQGESKVQPGFTFMDVSDQYVLARGAGGGLALW 582 A E + AA +D DP +V+EAI +EK SK A Q + +G+WRLVFTTGD KTQKK+GG YVPIKAVQ F+ Y I NGVY G P+++F G F W+ +S L++ FN + E P Y + + +P F ++ + D+ +AR G +A+W Sbjct: 54 AVETLRRAAAKRDIDPSSVLEAIYYLEK---SKPAA------QRAIPVSKLSGSWRLVFTTGDVKTQKKMGGTFDYVPIKAVQTFDDSSEPYRIENGVYWGDNPVVRFRGVFRWLPNRSGLKWQFNHVQLFGKDIEVPDEWKAAVGMRPEGYQAKKYEKEPFFNWIYIDDEIAVARATG--VAIW 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13837.2353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13837.2353.1 >prot_H-paniculata_contig13837.2353.1 ID=prot_H-paniculata_contig13837.2353.1|Name=mRNA_H-paniculata_contig13837.2353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp LRATRGRSSSLRMQSASVALDTVEQAQELILSAAKLKDQDPDAVIEAIRLback to top mRNA from alignment at H-paniculata_contig13837:4597..6865- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13837.2353.1 ID=mRNA_H-paniculata_contig13837.2353.1|Name=mRNA_H-paniculata_contig13837.2353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2269bp|location=Sequence derived from alignment at H-paniculata_contig13837:4597..6865- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13837:4597..6865- >mRNA_H-paniculata_contig13837.2353.1 ID=mRNA_H-paniculata_contig13837.2353.1|Name=mRNA_H-paniculata_contig13837.2353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig13837:4597..6865- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |