mRNA_H-paniculata_contig13816.2343.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13816.2343.1
Unique NamemRNA_H-paniculata_contig13816.2343.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 850 bits (2196), Expect = 1.200e-269
Identity = 447/620 (72.10%), Postives = 504/620 (81.29%), Query Frame = 2
Query:    2 HPDTRKSGGADGKSPSMLGIKAPMGSPVVQPRA----PGGGMGVVMPGRNDPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPS--VAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTPVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPGAAGAGAGAEDDGVAAGTAQ 1843
            HPD  +   A  KSPS+  + +P G P V P      P  G G    GRNDP G R++VT +L+YW+R  N++  S+E ++ A+LQ L  +  L TDEST+RF RVAT+LVV+AC+K+ R  + T A G   +DKAK      QLSY VVD YV+LLV++IRS K+ DP+   AV  R  MLNKVLST+ R+L+QD E KKAA           G++  G FDQRPYFRI L +V++MNKP+R LDN+NLQVLAAF SAFHALQPA CP FAF+WLELVSHR+FMP LLLVKQNKGWS MHRLL+DLLIFMEPHLRRP+LLE+VRLLY GMLRTLLVLLHDFPEFL DYHLSFCDVIP +CIQLRNL+L+AFPRSMRLPDPFTPNLKVDLLPEIAL PR+LSNYVAALSHN I+ DLDKFL TRHQP +FL EL  KLRLS QEAAHTGMTYNV C+N+LVVYVGSQAI QLNNKTP+ITHSAPMDVFHQLANKLDPEGRYFFLNA+ANQLRYPNQHTHY+SCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWG+LITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPG   AG G  D+ VA+G AQ
Sbjct: 2275 HPDQVRK--APPKSPSVHAM-SPAGGPRVAPGTAIPGPTSGPGANA-GRNDPAGIRDDVTHILHYWMRIVNDSTASEEASSAAILQALHVKNVLKTDESTERFFRVATDLVVDACVKTGRAPSVTLAMGGAPEDKAK------QLSYVVVDAYVKLLVVVIRSTKSADPNPAAAVTARCTMLNKVLSTIARMLLQDFETKKAA-----------GAATLGPFDQRPYFRIFLDLVEEMNKPDRQLDNTNLQVLAAFTSAFHALQPAVCPGFAFSWLELVSHRSFMPKLLLVKQNKGWSYMHRLLIDLLIFMEPHLRRPTLLESVRLLYQGMLRTLLVLLHDFPEFLSDYHLSFCDVIPAACIQLRNLILAAFPRSMRLPDPFTPNLKVDLLPEIALPPRILSNYVAALSHNNIKQDLDKFLQTRHQPANFLTELPAKLRLSAQEAAHTGMTYNVPCMNSLVVYVGSQAIQQLNNKTPIITHSAPMDVFHQLANKLDPEGRYFFLNAIANQLRYPNQHTHYYSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGLLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPGGPAAGTG-PDETVASGQAQ 2872          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 710 bits (1832), Expect = 5.780e-219
Identity = 377/560 (67.32%), Postives = 426/560 (76.07%), Query Frame = 2
Query:  140 DPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTPVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPGAAGAGAGAEDD 1819
            DP G+RE+V  LL++W+R C E P SDEK     LQ+L  R  L TDE+T+RF RVATELVVE+CLKS+RP+ P A                P LSY+VVD Y +LLV+L++S    DP+ A   R+A+LNKVLST+VRVL+QD++A+K A       +P         FDQRPYFR+LL +++D N P+R LD+SNLQVLAAFASAFH LQPA  P FAFAWLELVSHR FMP LLL +Q KGW  MHRLLVDLL FMEP LRR +L  AVR LY GMLR LLVLLHDFPEFLC+YH S CDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEI+  PR+LSNY AAL  +GI  DLDK+L TR  P  FL EL  +LRL   +AA TG  +NV  ++ALVVYVGSQAI Q+ +K   ITHSAPMDVF  LA  LD E RYFFLNAVANQLRYPN HTHYFSCVLLYLFAEA +E V+EQITRILLERLIVHRPHPWG+LITFIELIKNPRY FWSH FTHCAPELERVFESVARSCM PG A  G G+  D
Sbjct: 2121 DPPGSREQVMFLLDHWVRLCAERP-SDEKAHGPYLQLLQTRGALKTDEATERFFRVATELVVESCLKSARPA-PAAXXXXXXXXXXXXXXARPALSYSVVDAYGKLLVLLVKSVNTGDPAAATTARVALLNKVLSTLVRVLLQDLDARKGAAXXXXXXAP--------PFDQRPYFRLLLSLLQDFNAPDRVLDSSNLQVLAAFASAFHVLQPATAPAFAFAWLELVSHRMFMPTLLLARQQKGWMLMHRLLVDLLSFMEPRLRRAALGGAVRTLYRGMLRVLLVLLHDFPEFLCEYHFSLCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEISQPPRILSNYTAALVSSGISADLDKYLQTRG-PAQFLVELPARLRLPAVDAARTGSQHNVQALSALVVYVGSQAIAQMQSKAANITHSAPMDVFQHLAAALDAEARYFFLNAVANQLRYPNNHTHYFSCVLLYLFAEAGAEDVREQITRILLERLIVHRPHPWGLLITFIELIKNPRYDFWSHRFTHCAPELERVFESVARSCMAPGGAPGGGGSGAD 2669          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A7S2WB04_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB04_9STRA)

HSP 1 Score: 602 bits (1551), Expect = 8.080e-191
Identity = 332/570 (58.25%), Postives = 401/570 (70.35%), Query Frame = 2
Query:  134 RNDPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQ-NKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTP---VITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEA---QSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCM----TPGAAGAGAGA 1810
            R DP G RE+VT LL +W++  N+    ++K     L +L  +  L TDEST+ FLR+A E+ VE C+KS          GA A+      S+ P L+Y V+D +  +L +L++   A DP  ++  R+ +LN++L T+ RVL+ D       +E P  + P        AFDQRPYFR+   +++D+  P+  +D +NLQVL AFA+AFH LQP + P FAF+WLEL+SHR FMP LLL K   KGW  MHRLLVDL +FMEP+LRR  L  A++ LY G LR LLVLLHDFPEFLCDYH SFCDVIPP+CIQLRNL LSAFPR+MRLPDPFTPNLKVDLLPEIA  PR+LSNYVAALS+NGIR +LD +L  R  P  FL  L G+LR SP +AA    +YNVA INALVVY+GSQ+ILQL  K+P    I H   MDVF  L   LD EGRY+  NA+ANQLRYPN HTHYFSCVLLYLFAE     SE+VQEQITR+LLERLIVHRPHPWG+LITFIELIKNPRY+FW+  FTHCA E+ERVFESVARSCM    + G  G G GA
Sbjct:  580 RVDPPGAREQVTLLLEHWIKIWNDAGGVEQKCVQ-YLTILQHQNVLKTDESTEVFLRIAAEVCVEFCVKS----------GAKAE-----GSDLPTLNYKVIDAFASMLTILVKYASA-DPQ-SLTSRVHLLNRILGTLHRVLVAD-------SEGPRGARPM-------AFDQRPYFRVFANLLRDLTAPDPVVDANNLQVLGAFANAFHGLQPQSVPAFAFSWLELISHRTFMPTLLLAKPAQKGWMLMHRLLVDLFVFMEPYLRRSQLPLAIKTLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPNCIQLRNLFLSAFPRTMRLPDPFTPNLKVDLLPEIAQPPRILSNYVAALSYNGIRQELDNYLKNR-APKSFLEWLPGRLRASPSQAASGSASYNVASINALVVYIGSQSILQLQ-KSPQNTAIGHLPTMDVFQHLVTTLDAEGRYYLFNAIANQLRYPNNHTHYFSCVLLYLFAEVTVENSEVVQEQITRVLLERLIVHRPHPWGLLITFIELIKNPRYNFWAKEFTHCAQEIERVFESVARSCMGQSHSTGEPGGGIGA 1115          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A6S8SJ33_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8SJ33_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 4.750e-185
Identity = 327/557 (58.71%), Postives = 394/557 (70.74%), Query Frame = 2
Query:  140 DPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIR-SKKATDPSVAVN---QRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKT----PVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPG 1786
            DP G RE+VT LL  W+R  NE+P S EK     L +L Q      ++ST+RF+R+AT + VE+C++S      TA  GA AD       +   L+Y+VVD Y +LL++L++ +   + PS  +    QRL +LN+VL T+ R L+ + +                 +     FDQRPYFR+ L +++D+N P+  LD+SN +VLAAFA+  HALQPA  P FAF+WLELVSHR FMPNLLL K  KGW+ MHRLLVDL +F+EP+LR+  L +A RLLY G LR LLVLLHDFPEFL DYH SFCDVIP SCIQLRNL LSAFPRSMRLPDPFTPNLKVDLLPEI+  PR+LSN V AL    +R  LD++LLTRH P+ FL +L  KL  +     H   +YNV  +N+LVV+VG  AI QL+ K+      I HS PMDVF  L N LD EGRYF LNA+ANQLRYPN HTHYFSCVLLYLFAEA SE +QEQ+TR+LLERLIVHRPHPWG+LITFIELIKNPRYSFWSH FTHCA E+ERVFESVARSCM PG
Sbjct: 1157 DPAGAREQVTGLLEQWIRVWNESPGS-EKAYAQYLTLLQQHGVPRNEQSTERFVRLATVICVESCVESR-----TAEEGASAD-------SLGVLTYSVVDAYAKLLILLVKYAIPDSSPSTVLAGTPQRLDLLNRVLLTLTRTLVSNYDK----------------TVEMDNFDQRPYFRLFLNLLQDLNVPDPVLDSSNPRVLAAFATVLHALQPAVTPGFAFSWLELVSHRMFMPNLLLAKNQKGWALMHRLLVDLFVFLEPYLRQVQLSDAARLLYKGALRVLLVLLHDFPEFLSDYHFSFCDVIPSSCIQLRNLFLSAFPRSMRLPDPFTPNLKVDLLPEISQPPRILSNCVIALEACALREPLDEYLLTRH-PISFLLDLPRKLLDANTNNDHVITSYNVPLVNSLVVHVGMTAISQLHTKSGNLQQPIAHSTPMDVFQHLMNNLDSEGRYFLLNAIANQLRYPNNHTHYFSCVLLYLFAEATSEYIQEQVTRVLLERLIVHRPHPWGLLITFIELIKNPRYSFWSHGFTHCATEIERVFESVARSCMGPG 1683          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: D8LMN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN2_ECTSI)

HSP 1 Score: 571 bits (1472), Expect = 5.120e-178
Identity = 334/617 (54.13%), Postives = 378/617 (61.26%), Query Frame = 2
Query:    2 HPDTRKSGGADGKSPSMLGIKAPMGSPVVQPRAPGGG---MGVVMPGRNDPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTPVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPGAAGAGAGAEDDGVAAGTAQ 1843
            HPD  +   A  KSPSM  + +P G P V P  P  G         GRNDP G R++VT +L+YW+R  +++  S+E ++ A+LQ L  +  L TDEST+RF RVAT+LVV+AC+K+ R  + T A G+  +DKAK      QLSY VVD YV+LLV++                                                                                         VLAAF SAFHALQPA CP FAF+WLELVSHR+FMP LLLVKQNKGWS MHRLL+DLLIFMEPHLRRP+LLE+VRLLY GMLRTLLVLLHDFPEFL DYHLSFCDVIP +CIQLRNL+L+AFPRSMRLPDPFTPNLKVDLLPEIAL PR+LSNYVAALSHN I+ DLDKFL TRHQP +FL EL  KLRLS QEAAHTGMTYNV C+N+LVVYVGSQAI QLNNKTP+ITHSAPMDVFHQ                                                                  WG+LITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPG A AG GA D+ VA+G AQ
Sbjct:  837 HPDQVRK--APPKSPSMHAM-SPAGGPRVAPGTPIPGPXXXXXANAGRNDPAGIRDDVTHILHYWMRVVSDSTASEEASSAAILQALHVKNVLKTDESTERFFRVATDLVVDACVKTGRAPSVTLAMGSSPEDKAK------QLSYVVVDAYVKLLVVV-----------------------------------------------------------------------------------------VLAAFTSAFHALQPAVCPGFAFSWLELVSHRSFMPKLLLVKQNKGWSYMHRLLIDLLIFMEPHLRRPTLLESVRLLYQGMLRTLLVLLHDFPEFLSDYHLSFCDVIPAACIQLRNLILAAFPRSMRLPDPFTPNLKVDLLPEIALPPRILSNYVAALSHNNIKQDLDKFLQTRHQPANFLTELPAKLRLSAQEAAHTGMTYNVPCMNSLVVYVGSQAIQQLNNKTPIITHSAPMDVFHQ------------------------------------------------------------------WGLLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTPGGAAAGTGA-DETVASGQAQ 1288          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A7S3NMR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMR3_9STRA)

HSP 1 Score: 569 bits (1467), Expect = 2.440e-174
Identity = 305/555 (54.95%), Postives = 384/555 (69.19%), Query Frame = 2
Query:  140 DPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKL-RLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTPV------ITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTP 1783
            DP G +E VTQLL  W+R  NE+P S EK   + L +LAQ      D ST+RF+R+A      AC+ +++                    +   + Y V+D Y +LLV++I+    T+ S A+  RLA+LN+VL+T+   L+ + +A     E  V              +QRPYFRI + ++ D+N P+  LD+SN +V+ AFA+ FHALQP+  PVFAF+WLEL+SHR F+PN+LL+K  KGW  MHRLLVDL +F+EP+LRR  L +A+R LY G LR LLVLLHDFPEFL D+H SFCD+IP SCIQLRNL LSAFPRSMRLPDPFTPNLKVDLLPEI+  PRVLSN VAAL    +R  LD++L TRH P+ FL EL  KL +++         +Y +  +NALVV++G+ AI QL+ K+        I HSAPMDVF  L N LD EGRY  LNA+ANQLR+PNQHTHY+SCV+L+LFAE+  + V+EQITR+LLERLIVHRPHPWG+LITFIELIKN RY+FWSH FTHCA E+ERVFESVARSCM P
Sbjct: 1048 DPPGAQEHVTQLLEQWIRVWNESPGS-EKAYASYLALLAQHGVPRADVSTERFVRLA----ARACVDNAKRRLEAQXXXXXXXXXXXXXXDIDTIDYTVIDAYAKLLVLIIKYGGGTENSQAI--RLALLNRVLTTLTNTLLDEYDAAHKNNEKAV------------CLEQRPYFRIFIDLLHDLNVPDPMLDSSNPRVICAFATCFHALQPSVLPVFAFSWLELISHRMFLPNVLLIKNQKGWIIMHRLLVDLFVFLEPYLRRIELTDAIRTLYKGTLRVLLVLLHDFPEFLSDFHHSFCDLIPSSCIQLRNLFLSAFPRSMRLPDPFTPNLKVDLLPEISQPPRVLSNCVAALDAFDLRESLDEYLRTRH-PISFLLELPRKLTKIAINTKEKDVSSYEIPLVNALVVHIGTTAIAQLHAKSQAGASAGPIAHSAPMDVFQHLTNNLDAEGRYLLLNAIANQLRFPNQHTHYYSCVILFLFAESTDQFVKEQITRVLLERLIVHRPHPWGLLITFIELIKNSRYAFWSHDFTHCASEIERVFESVARSCMGP 1582          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A7S0IL62_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IL62_MICPS)

HSP 1 Score: 531 bits (1369), Expect = 2.540e-172
Identity = 299/554 (53.97%), Postives = 372/554 (67.15%), Query Frame = 2
Query:  128 PGRNDPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYV-AALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAIL-QLNNKTPVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTP 1783
            P +  P G RE V Q  + W R   + P  D  T+   ++ LA+ + L  D++ +R  R+  EL    CL S  P      A  G    A    +  +LSY  VD +VRL+  L R ++  DP   +N RLA+L K L+ VVR+ ++DV+ + A                  AF+ RPY R L  ++ +M+ P+  LD+S+ QVLA+FASA  ALQP   P FAF+WLELVSHR F+P LL+    +GW  + +LL  +L F+EP LR   L E VRLLY G LR LLVLLHDFPEFLCD+H + CDVIPP+CIQ+RNLVLSAFPR+MRLPDPFTPNLKVDLLPEI  +PRV++    AA   + +R DLD  L TR  P +F+A L  +L L  + A   G  YNV  INA+V+YVG QAI     + +  ITHSAPM+VF +LA +LD EGRY FLNAVANQLRYPN HTHYFSCVLLYLFAEA SE+VQEQITR+LLERLIV+RPHPWG+LITFIELIKNPRY+FW HSFT CAP++ER+FESVARSC+ P
Sbjct:    5 PQKPAPPGLRETVAQTFDEWARV-QDLPAGDTTTS-VFVENLAKGRLLHGDDAQERTARILAELATTHCLGSELPP-----ASGGMSVTAGPPGSPSRLSYVAVDAFVRLVAALCRRRE--DP---INARLALLGKSLAAVVRLALKDVDERGA------------------AFNPRPYHRALTGLMMEMHAPDAALDSSHPQVLASFASALLALQPLRIPGFAFSWLELVSHRCFLPRLLVDHNRRGWPLLQKLLTAVLKFLEPSLRGAELTETVRLLYRGTLRLLLVLLHDFPEFLCDHHFNLCDVIPPNCIQMRNLVLSAFPRNMRLPDPFTPNLKVDLLPEITQSPRVITGEADAAFRASQLRADLDAHLKTRSSP-NFVATLRARLTLDARAAERAGTAYNVPLINAVVLYVGVQAIAANRKDASSPITHSAPMEVFQRLAAELDTEGRYLFLNAVANQLRYPNCHTHYFSCVLLYLFAEAGSEVVQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWGHSFTRCAPDIERLFESVARSCIAP 527          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A7S0IL61_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IL61_MICPS)

HSP 1 Score: 538 bits (1385), Expect = 2.140e-171
Identity = 309/587 (52.64%), Postives = 385/587 (65.59%), Query Frame = 2
Query:   62 KAPMGSPVVQPRA-----------PGGGMGVVMPGRNDPVGTREEVTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYV-AALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAIL-QLNNKTPVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTP 1783
            KAP G  ++  RA           PG   G+  P + DP G RE V Q  + W R   + P  D  T+   ++ LA+ + L  D++ +R  R+  EL    CL S  P      A  G    A    +  +LSY  VD +VRL+  L R ++  DP   +N RLA+L K L+ VVR+ ++DV+ + A                  AF+ RPY R L  ++ +M+ P+  LD+S+ QVLA+FASA  ALQP   P FAF+WLELVSHR F+P LL+    +GW  + +LL  +L F+EP LR   L E VRLLY G LR LLVLLHDFPEFLCD+H + CDVIPP+CIQ+RNLVLSAFPR+MRLPDPFTPNLKVDLLPEI  +PRV++    AA   + +R DLD  L TR  P +F+A L  +L L  + A   G  YNV  INA+V+YVG QAI     + +  ITHSAPM+VF +LA +LD EGRY FLNAVANQLRYPN HTHYFSCVLLYLFAEA SE+VQEQITR+LLERLIV+RPHPWG+LITFIELIKNPRY+FW HSFT CAP++ER+FESVARSC+ P
Sbjct:  205 KAPEGLAILVERARAAGDSSNKKPPGTSGGLFDPQKPDPPGLRETVAQTFDEWARV-QDLPAGDTTTS-VFVENLAKGRLLHGDDAQERTARILAELATTHCLGSELPP-----ASGGMSVTAGPPGSPSRLSYVAVDAFVRLVAALCRRRE--DP---INARLALLGKSLAAVVRLALKDVDERGA------------------AFNPRPYHRALTGLMMEMHAPDAALDSSHPQVLASFASALLALQPLRIPGFAFSWLELVSHRCFLPRLLVDHNRRGWPLLQKLLTAVLKFLEPSLRGAELTETVRLLYRGTLRLLLVLLHDFPEFLCDHHFNLCDVIPPNCIQMRNLVLSAFPRNMRLPDPFTPNLKVDLLPEITQSPRVITGEADAAFRASQLRADLDAHLKTRSSP-NFVATLRARLTLDARAAERAGTAYNVPLINAVVLYVGVQAIAANRKDASSPITHSAPMEVFQRLAAELDTEGRYLFLNAVANQLRYPNCHTHYFSCVLLYLFAEAGSEVVQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWGHSFTRCAPDIERLFESVARSCIAP 760          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A2G3DJ81_CAPCH (CCR4-NOT transcription complex subunit 1 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3DJ81_CAPCH)

HSP 1 Score: 520 bits (1340), Expect = 4.390e-167
Identity = 292/558 (52.33%), Postives = 352/558 (63.08%), Query Frame = 2
Query:  164 VTQLLNYWLRFCNENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSRPSTPTAAAGAGADDKAKANSNTPQ------LSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTP------------VITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCMTP 1783
            V+ L   W R C     +D   A  +LQ L Q   L  DE++DRF R  TEL V  CL S                  +  S+TPQ      LS+  +D Y +L+  +++       S     +L +L KVL+  VR + +D + KK                    F+ RPYFR+ +  + D++  +   D +N  VL A A+AFHALQP   P F+FAWLELVSHR+FMP LL     KGW    RLLVDL  FMEP LR   L E V+ LY G LR LLVLLHDFPEFLCDYH SFCDVIPPSCIQ+RN++LSAFPR+MRLPDP TPNLK+DLL EI+ +PR+LS   AAL    ++GD+D++L TR Q   FL+EL  KL LSP EAA  G  YNV  IN+LV+YVG QAI QL  KTP            V    A +DVF  L   LD EGRY FLNAVANQLRYPN HTHYFS +LLYLFAE+  EM+QEQITR+LLERLIV+RPHPWG+LITFIELIKNPRY+FWS  FT CAPE+E++FESV+RSC  P
Sbjct:   74 VSMLFAEWYRICEIPGANDATLAHYVLQ-LNQSGLLKGDETSDRFFRRLTELSVSHCLSS------------------EVMSSTPQPHQVQPLSFLAIDIYAKLVFSILKFYPVDQGS----SKLLLLPKVLAITVRFIQKDADEKKM------------------IFNPRPYFRLFINWLVDLSSLDPVFDGANFHVLTALANAFHALQPLKVPGFSFAWLELVSHRSFMPKLLAGNAQKGWPYFQRLLVDLFQFMEPFLRNAELGEPVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKSKQMKGDVDEYLKTRQQGSPFLSELKQKLLLSPSEAAKAGTRYNVPLINSLVLYVGMQAIQQLQAKTPHAQSMPSSVPFAVFLVGAALDVFQTLIMDLDTEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAESNQEMIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWSRPFTRCAPEIEKLFESVSRSCGGP 590          
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Match: A0A7S1C365_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C365_9STRA)

HSP 1 Score: 533 bits (1374), Expect = 1.330e-166
Identity = 279/456 (61.18%), Postives = 336/456 (73.68%), Query Frame = 2
Query:  419 QLSYAVVDPYVRLLVMLIRSKKATDPSVAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAFDQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFAFAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLEAVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAFPRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLLTRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQLNNKTP---VITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFSCVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRYSFWSHSFTHCAPELERVFESVARSCM 1777
            +++Y  VD   +L+V+LI   K T+P+ A   ++AMLNKVL+ V RVL++D  A +   +A     PG        FDQRP++R+LL ++ D+N P+  LD  N+Q LA+FA+  H LQP+  P FAFAWL+L +HR+ MP LLL KQ KGW  + RL+ DLL F+ P LR     +AVRL+Y G LR LLVLLHDFPEFLCDYH +FCDVIPP+CIQLRNL+LSAFPR+MRLPDPFTPNLKVDLLPEI+  P +LS+   AL  +G+  DL  +L TR  P  FL  LA +L LSP+EA   G  Y V  IN LV+YVG QAI QL ++      I HSAPMD+F QLA  LD EGRY+FLNAV NQLRYPN HTHYFSCVLLYLFAEA +E+VQEQITR+LLERLIVHRPHPWG+LITFIELIKNPRY FWSHSFT CA E+ER+FESVA SCM
Sbjct:  402 KMTYTAVDAMSKLVVLLI---KYTEPAAA---KVAMLNKVLTVVARVLLRD--AARHMPDAVARGEPG--------FDQRPHYRLLLNLLVDLNTPDPVLDKLNVQFLASFANILHVLQPSRVPQFAFAWLDLFAHRSLMPKLLLAKQQKGWQLVQRLVTDLLSFLYPFLRSGETNDAVRLIYKGTLRVLLVLLHDFPEFLCDYHFAFCDVIPPTCIQLRNLILSAFPRNMRLPDPFTPNLKVDLLPEISQPPHILSDVTRALHAHGLLDDLHTYLRTRGPPA-FLGGLAARLLLSPEEAVEAGTRYAVPAINGLVLYVGKQAIAQLQDEASGASPIAHSAPMDIFQQLAKDLDSEGRYYFLNAVTNQLRYPNNHTHYFSCVLLYLFAEAPNEVVQEQITRVLLERLIVHRPHPWGLLITFIELIKNPRYDFWSHSFTRCAAEIERLFESVAHSCM 840          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13816.2343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXN6_9PHAE1.200e-26972.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHM2_9STRA5.780e-21967.32CCR4-Not complex component, Not1-domain-containing... [more]
A0A7S2WB04_9STRA8.080e-19158.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6S8SJ33_9STRA4.750e-18558.71Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
D8LMN2_ECTSI5.120e-17854.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3NMR3_9STRA2.440e-17454.95Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0IL62_MICPS2.540e-17253.97Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S0IL61_MICPS2.140e-17152.64Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A2G3DJ81_CAPCH4.390e-16752.33CCR4-NOT transcription complex subunit 1 n=1 Tax=C... [more]
A0A7S1C365_9STRA1.330e-16661.18Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13816contigH-paniculata_contig13816:60..6188 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Seed ortholog score568.9
Seed ortholog evalue2.7e-159
Seed eggNOG ortholog2880.D8LMN2
KEGG koko:K12604
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0017148,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032774,GO:0032947,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1990904,GO:2000112,GO:2000113
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
EggNOG OGsCOG5103@1,KOG1831@2759
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Exons4
Model size3918
Taxonomic scopeEukaryota
Cds size1797
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13816.2343.1prot_H-paniculata_contig13816.2343.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13816 109..4116 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929098.3766875-UTR-H-paniculata_contig13816:59..1081622929098.3766875-UTR-H-paniculata_contig13816:59..108Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13816 60..108 +
1691480730.6630802-UTR-H-paniculata_contig13816:59..1081691480730.6630802-UTR-H-paniculata_contig13816:59..108Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13816 60..108 +
1622929098.431381-UTR-H-paniculata_contig13816:4116..61881622929098.431381-UTR-H-paniculata_contig13816:4116..6188Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13816 4117..6188 +
1691480730.7187674-UTR-H-paniculata_contig13816:4116..61881691480730.7187674-UTR-H-paniculata_contig13816:4116..6188Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13816 4117..6188 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929098.3903291-CDS-H-paniculata_contig13816:108..13741622929098.3903291-CDS-H-paniculata_contig13816:108..1374Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 109..1374 +
1691480730.6748037-CDS-H-paniculata_contig13816:108..13741691480730.6748037-CDS-H-paniculata_contig13816:108..1374Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 109..1374 +
1622929098.401065-CDS-H-paniculata_contig13816:1716..18541622929098.401065-CDS-H-paniculata_contig13816:1716..1854Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 1717..1854 +
1691480730.6844-CDS-H-paniculata_contig13816:1716..18541691480730.6844-CDS-H-paniculata_contig13816:1716..1854Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 1717..1854 +
1622929098.411214-CDS-H-paniculata_contig13816:2374..25721622929098.411214-CDS-H-paniculata_contig13816:2374..2572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 2375..2572 +
1691480730.693989-CDS-H-paniculata_contig13816:2374..25721691480730.693989-CDS-H-paniculata_contig13816:2374..2572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 2375..2572 +
1622929098.4212344-CDS-H-paniculata_contig13816:3921..41161622929098.4212344-CDS-H-paniculata_contig13816:3921..4116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 3922..4116 +
1691480730.7084594-CDS-H-paniculata_contig13816:3921..41161691480730.7084594-CDS-H-paniculata_contig13816:3921..4116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13816 3922..4116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13816.2343.1

>prot_H-paniculata_contig13816.2343.1 ID=prot_H-paniculata_contig13816.2343.1|Name=mRNA_H-paniculata_contig13816.2343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp
MLGIKAPMGSPVVQPRAPGGGMGVVMPGRNDPVGTREEVTQLLNYWLRFC
NENPVSDEKTAPAMLQVLAQRKTLLTDESTDRFLRVATELVVEACLKSSR
PSTPTAAAGAGADDKAKANSNTPQLSYAVVDPYVRLLVMLIRSKKATDPS
VAVNQRLAMLNKVLSTVVRVLMQDVEAKKAATEAPVSSSPGGGSSNSGAF
DQRPYFRILLCMVKDMNKPNRHLDNSNLQVLAAFASAFHALQPAACPVFA
FAWLELVSHRNFMPNLLLVKQNKGWSNMHRLLVDLLIFMEPHLRRPSLLE
AVRLLYTGMLRTLLVLLHDFPEFLCDYHLSFCDVIPPSCIQLRNLVLSAF
PRSMRLPDPFTPNLKVDLLPEIALAPRVLSNYVAALSHNGIRGDLDKFLL
TRHQPLHFLAELAGKLRLSPQEAAHTGMTYNVACINALVVYVGSQAILQL
NNKTPVITHSAPMDVFHQLANKLDPEGRYFFLNAVANQLRYPNQHTHYFS
CVLLYLFAEAQSEMVQEQITRILLERLIVHRPHPWGVLITFIELIKNPRY
SFWSHSFTHCAPELERVFESVARSCMTPGAAGAGAGAEDDGVAAGTAQ*
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mRNA from alignment at H-paniculata_contig13816:60..6188+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13816.2343.1 ID=mRNA_H-paniculata_contig13816.2343.1|Name=mRNA_H-paniculata_contig13816.2343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6129bp|location=Sequence derived from alignment at H-paniculata_contig13816:60..6188+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCACCCGGATACGAGGAAGAGCGGAGGAGCCGATGGCAAGAGCCCTTCAA TGCTCGGCATCAAGGCTCCCATGGGGTCGCCCGTTGTGCAGCCCCGGGCA CCTGGCGGCGGGATGGGGGTTGTCATGCCTGGCAGGAATGATCCTGTAGG CACGCGCGAAGAGGTGACGCAGCTGCTGAACTACTGGCTGCGATTTTGCA ACGAGAACCCTGTGTCCGACGAGAAGACTGCACCGGCGATGCTGCAAGTA TTGGCTCAGCGGAAGACTCTGCTAACGGACGAATCGACCGACCGGTTCTT GCGAGTGGCGACGGAGCTGGTGGTGGAGGCTTGTCTCAAGAGCAGCAGAC CCTCGACGCCCACGGCGGCCGCAGGCGCTGGCGCGGATGACAAGGCGAAG GCCAACAGCAACACCCCGCAGCTCTCTTACGCTGTGGTGGACCCCTACGT GCGGCTTTTGGTGATGCTGATCCGTTCGAAGAAAGCAACCGACCCTTCGG TGGCCGTGAACCAGCGACTCGCCATGCTGAACAAGGTCCTGTCTACCGTT GTGAGGGTGCTGATGCAGGATGTGGAAGCTAAGAAGGCTGCCACAGAGGC ACCAGTGTCGTCGTCGCCGGGCGGCGGTAGCAGCAATAGCGGTGCGTTTG ACCAGAGGCCCTACTTTAGGATCCTGCTCTGCATGGTGAAGGACATGAAC AAGCCCAACCGCCACCTGGACAACAGCAACCTGCAGGTGCTGGCGGCCTT TGCGTCAGCGTTCCACGCCCTGCAGCCGGCAGCGTGCCCCGTCTTCGCGT TCGCGTGGCTCGAGTTGGTGTCACACCGAAACTTCATGCCTAACCTGCTG CTCGTGAAGCAGAACAAGGGATGGTCGAACATGCACCGGTTGTTGGTGGA CCTCCTGATCTTCATGGAGCCGCATCTGCGCCGGCCGTCCCTGCTGGAAG CCGTCCGTCTGCTGTACACAGGCATGCTACGCACGCTACTGGTCCTTCTC CATGACTTTCCAGAGTTCCTCTGCGACTACCACCTGAGCTTTTGCGATGT GATTCCGCCCTCGTGCATCCAGCTGCGGAACCTTGTGCTTTCCGCTTTCC CGCGCAGCATGAGGCTCCCGGACCCTTTCACACCCAACTTGAAGGTGGAC CTGCTGCCGGAGATCGCGCTGGCGCCGAGAGTGCTGAGCAACTACGTGGC GGCCTTGTCTCACAACGGCATCCGTGGAGATCTGGACAAGTTCTTGCTGA CGAGGCACCAGCCCCTGCATTTCTTGGCAGAGCTTGCCGGCAAGCTTCGG CTGTCCCCTCAAGAGGTATTTGCTTTTATATCTCTGTAGCGAGGGGTTGG GGGGGGGTTGATCGGAGGGAGATAAGCTGCGTGTGGTCTGTAGGGAGAAA GGGTTTGTGCGTTTGTGTTTGTCTTGTGGCATCTGTAAAGACCGATGAAA CGTGCAGTGGTATCAACTGCGCGTGGGGTATCCTTTTCCTCCGAGGAATG TTAACGGAGGTTTGGATAAGTGTGCGGATTTTCTTATTATCACAACGCGT CTGTAATTTTTCTCATACATGGACGATCGTTGGCTGTTTCACCTTCTTGT TTGTTGTCGCATGAATTTTCTCCCATTTCCTACCTCTGGGCTTCAAATGT AACGTAGGCTGCGCACACTGGCATGACGTACAACGTGGCGTGCATTAACG CTCTAGTGGTGTACGTGGGAAGCCAGGCAATCCTACAGCTCAACAACAAG ACTCCTGTCATCACCCACTCTGCCCCGATGGACGTGTTCCACCAGGTTAG TCTTGACAGTACTAACATTTGAAGCGTGTTACACGGCGGGAAAATTGTGT TTTTTCATGTTTTTTCATCCTCAACAACGGTCGCACCCCACGTCAAAAAT AACCTGTCCAATGGCGAATAATGATGCAGACCACCAACATGATCAAAACC TTTCACATGCCGGATAAGTACTCAGTTCACTCTGTAATATACCTCCTCTT GTACATATCGTGAATTTGATATTTCTGCAGCTGTTTTTTTCTGGCAACCA AGGCTGTCCATTGTTTTTCGTTCCGTCAGTGTCGCGAGAGTAGATTGTTT TTCTTGTCTGGTGTGTGTTGGTTGGCTCGGATACTTGGCTGCGAAGCCGT CAATAGATTTCTGTATTTTTGTGATTACTCGCGATGACGAAGCAAATTCT GATGAAACTATTCGGAAAAAGGAACTATGTGGACTACAAGAGCTATCTCA TCATTTGGCGTTTTGTCCCGTCTTCTGTCTTTTTTATGGCTCCTCTCCCC GAAACTTGAACACAGCTGGCGAACAAATTGGACCCTGAGGGGAGATATTT CTTCCTTAACGCGGTGGCCAATCAGCTGCGCTATCCCAACCAGCATACGC ACTACTTCAGCTGTGTGTTACTTTATCTGTTCGCCGAGGCCCAGTCAGAG ATGGTGCAGGAGCAGATCACACGGATCCTCCTCGAAAGGCTTATCGTGCA CCGTCCCCACCCGGTAAGGGCAATGGTTGTGTCATTCCAATGACTGTCAT ACTCCGGTGGTTGAACTAAGGGGCCCTACCAACGGAACCCACCGAACCAG GGCCCTCTAAAATTGAAAAAGTGAATTCTTGATGGGGGCTGAGGGGGGAG GGGTGCCCCCCTTTCAAGGGGGGGAACGCACCCTATGGGCACTTTATTAC TTGATTACAGTAAAGCACGACTTTGATTTGATTATAGCATGAGAAGACCA TACTGCCGCTTTGCGGCGCAACCCCCCAGCTGGTGTGGTCTGCAGCTCCA GCGCAGTACCTGACTGTACTGTACTGTGGGCAACTATGGCTTGACTGTGG GCCTCAGTAATGTCTACAGCAAAGGGCCAGCAGAGTGATTCAGGCAGCGG AGCTGTTGCTGAGGTAACAGCAGTGCCAGAAATACTGGAAGGGCTACCGG TCAGCTGGAAAAAGCGTGTTGGCAGCAGTTTCTCTTGGGTCTCAAAAGGC GAAACTTGGGAAAATGAATCACGGCAAGTTGGATTGTGACTACGGCCACA TTACAATGTTCACAAAGTTGTCTCAACGCCGTACCCCCCTTTCCCCCCGG TAGCAATGGCCGGACACAAATCACCACGGTTTTGAAGTGCTCACTTGTGG CTGACCTTTCCTGTGTGAAGCCGTAGCCCAAATCGTCGAAGTTGATGGAG TAATAGCAACAATTTAATTTTCCCGTTTTTTTGGATTCTAGAGGCGTCTC GCGGGGGGGGGGGCGGGGGGGGGTGAAGGTGCTGGTTCGGTTCGGTCGGT TCCGTTGTAGAGCCCCTTGATTGAGCAGATAATTTGCTGGACGTTTGGGG AGGATTTTCACACTCTCCATCCAGGTGTTGTTTTTGGAGGACTAGTAGGT TTGCGTTGTTTCCCTCAGTGCATTAAAAAACGTGCATGTACAGCGGCATC CTAATTCGACTTGTATTTGTTTTTGTATCGGCACGGGTGTGATATGGTGA ATCTTTTACATGCACAAATGGCTTTCTGACGTCTGTAGACATGAGACACC TCGCGATATTCGTGTTTCCCGTTCGTCATTTGAGGTAGTGACATTTGCGC TTTTTTTACTGTTAGCCTCCTTCAGTAGTTTTGTGTCGGTTCGACTGTAG TGCATGTAGAACATCGTTCATTCGGTCTACAAGCTTCGGCTGTTGATGTG CATCGATGTTCTCTACTCGATGTATCCCCCCAGCCTGCATTTACTAGTCT AAATCATATTATTTTTTCTTGGTCAATAATGAAATTCAATATCTTAGCTC TGCTCGCTCTCCTCCCTGCGCTCCTGTAACCTTGTGTTTTATCCGTCATG CCGCACCCTCAGTGGGGCGTCTTGATCACCTTCATTGAGCTCATCAAGAA TCCGCGGTACAGCTTCTGGAGTCATAGCTTCACGCACTGCGCTCCGGAGC TAGAGCGAGTTTTCGAGAGTGTCGCGCGCAGTTGCATGACGCCCGGCGCG GCGGGCGCTGGGGCGGGGGCTGAGGATGACGGTGTTGCCGCCGGCACGGC ACAGTAGCGAGGGGCGTGGGGAAGACCTTTCCATTTGCTTCGCTGCGGGA GAATCTGCCAGGGAGATATCGGGGATTTTCCTTCGTGGTTTGGGCTGGTT TTGGGGGGGGCGGAACGTTTCGTTTTTGCTCTTGTGTTTTCTGTTCCGTC CCACGAAACGCGGAACATGGTTTTGATTGCAAACCAATGAAATTAAATGT TCTTGTCTCGCGTTTGGATGGTTTTGTAATTTTTTTGCAGCGAAAAGCAA AGCAAGTTTTGCTGCTGTGTTGATCGTACAGTTCGCTCCGCGCCGCATAT CTCGTACGGGCTTACTTCACGTTTTGTGTAGTTGTGATGCATAAAGGCAC ACGGGACAGCTCTTCTTGGTTCGGCAATGTTGGCACGCGTGGGTGCGTGC GGCAGGTTATACCAGTATGAATGAGGGCGGGGGGATACCTTTCCTCAGCG CTGGTTGGAGTGAGAATCCCTAGTGAGCGGCTAGACCAGGGAATGCGACG TGTTCTGGAAATAACGTGAATCTTCGTGGAGGGTTAGTGAAAGAACAGGA GAGGGACTTGGTGCTATGGATGAGAATGGGAAGGGGTTGCGGGCGCAGTT TTTTGTACCACGACTTTGGACGAGGGGTGAGGGTTGCAGGGAGGAGAGGG CAGAAGTTGTAATTTCCCCTACGGAGTAGCTCGGTTTCGAGGGTATAGTG CCCTAGAATTTGAAATCCAGATGCAGCTTGGCGTCGCTGTGTCCGGCGAA TTGGTGAGCCTAGTCGCCCATCTCTGACCCAGAATTACCAAATCACCCTC TTCACGGTCACGCTTGTCGTTGTTCTCTTGTTGGCCAGCTACTTAGTTTT TATAGAGATGGTACTAAGCTTGATGCGTTGTTGCAATATCCCCGGGATGA GCGTGTGTGTGGGGTGGTAACGAGAACGAAAGCTAATGAATTGTGAGGTG AATCATTGGACTGGTTTCATTTTGCGCTTGGGAGGTGAGGGTAGGGGGAA TTTGTACATTGCGCAGCCCGCATGTCAGCATCGAGTACATGCAGTCCTCA TAGTAGCAAGTGTAGTGGCGTGTTGTAGGGCCCAAAATCACGGTAGTGCC TCGCTTCAGACCTGTCATGCAAGATGAAATAGCCCTATATGGTTATTTGG ATTATGCACGGCGATGCCAGCAGCAGGCTTACGGCATGAGAAATACAGAA TCGATGCACCTTCGCTGGAACGTTAGTTGAAATTTCATGTCCAACGAATT TGACGTCGGCAATCGTGGTGGTAGTTGGATCTGCACGAGTTGTGGTCAGC TGTTTTCATTGTCAGCTTGTTTTCTGGTGGATACAACCCGGCGTTAGAGG GGTACCGCTTTGTTAGTGCTAGGGATTTGTGGGCTGTTGTTTGGGTTCTT TCTTAAATATGCGTGTGATACTTGAGCGTCTGTAGCAATTCGCATCTGTG TGTACTGTGTGCGACTGTTTGTGTATGATGTTGTGCGCGTTGATCGCCCC TGTTAGTTCGTGCAGACACACACATTCGGAAAACTCCCGTGATTGTCGAC ACTCTGGCCTTTCTTGCCAGAGCGTCGTATTGAGACGTATATCCTCACCA GAAGTATGTGGGTGTTAGTTGTGATTATTCAAACTCCTTTTTTGCCTTTT GGTTTCAAGGAAAATACTTTTTTTCCGTATGCGCCCACCAACTTTTTAGC TTCTGTGGCAGGTTTTATTTCGACGGTGCTTGTACCTAATATTGCTCACG TTTTACGTAATATACTACATATACTATGCACAGAGAGCGGCAGAGAGGTT GTTTGGGGGGTACGTTTTGCGTGTCATGTACAATGAGCGGCAGGTAAATC GTGTTCAAACGAGCTATTAAATTCTTCAGGGACACGTACAGTAGATGGGA TGGCTCGTCACTGAGGGACCGGTCGACCGTGCTGCTTCGTTGGCGGTCTG AGCATCGCGAAAACATGGATATTACATCAATCTTTTTCTCCTATCGTGTT GAAATGGAGCTACGTGCTTTCTTACGACGTTTTCCTCATGGTGATCGATG TATGCCTTTTTGTCTACGGTCAACAGTAT
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Coding sequence (CDS) from alignment at H-paniculata_contig13816:60..6188+

>mRNA_H-paniculata_contig13816.2343.1 ID=mRNA_H-paniculata_contig13816.2343.1|Name=mRNA_H-paniculata_contig13816.2343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3594bp|location=Sequence derived from alignment at H-paniculata_contig13816:60..6188+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCGGCATCAAGGCTCCCATGGGGTCGCCCGTTGTGCAGCCCCGGGC
ACCTGGCGGCGGGATGGGGGTTGTCATGCCTGGCAGGAATGATCCTGTAG
GCACGCGCGAAGAGGTGACGCAGCTGCTGAACTACTGGCTGCGATTTTGC
AACGAGAACCCTGTGTCCGACGAGAAGACTGCACCGGCGATGCTGCAAGT
ATTGGCTCAGCGGAAGACTCTGCTAACGGACGAATCGACCGACCGGTTCT
TGCGAGTGGCGACGGAGCTGGTGGTGGAGGCTTGTCTCAAGAGCAGCAGA
CCCTCGACGCCCACGGCGGCCGCAGGCGCTGGCGCGGATGACAAGGCGAA
GGCCAACAGCAACACCCCGCAGCTCTCTTACGCTGTGGTGGACCCCTACG
TGCGGCTTTTGGTGATGCTGATCCGTTCGAAGAAAGCAACCGACCCTTCG
GTGGCCGTGAACCAGCGACTCGCCATGCTGAACAAGGTCCTGTCTACCGT
TGTGAGGGTGCTGATGCAGGATGTGGAAGCTAAGAAGGCTGCCACAGAGG
CACCAGTGTCGTCGTCGCCGGGCGGCGGTAGCAGCAATAGCGGTGCGTTT
GACCAGAGGCCCTACTTTAGGATCCTGCTCTGCATGGTGAAGGACATGAA
CAAGCCCAACCGCCACCTGGACAACAGCAACCTGCAGGTGCTGGCGGCCT
TTGCGTCAGCGTTCCACGCCCTGCAGCCGGCAGCGTGCCCCGTCTTCGCG
TTCGCGTGGCTCGAGTTGGTGTCACACCGAAACTTCATGCCTAACCTGCT
GCTCGTGAAGCAGAACAAGGGATGGTCGAACATGCACCGGTTGTTGGTGG
ACCTCCTGATCTTCATGGAGCCGCATCTGCGCCGGCCGTCCCTGCTGGAA
GCCGTCCGTCTGCTGTACACAGGCATGCTACGCACGCTACTGGTCCTTCT
CCATGACTTTCCAGAGTTCCTCTGCGACTACCACCTGAGCTTTTGCGATG
TGATTCCGCCCTCGTGCATCCAGCTGCGGAACCTTGTGCTTTCCGCTTTC
CCGCGCAGCATGAGGCTCCCGGACCCTTTCACACCCAACTTGAAGGTGGA
CCTGCTGCCGGAGATCGCGCTGGCGCCGAGAGTGCTGAGCAACTACGTGG
CGGCCTTGTCTCACAACGGCATCCGTGGAGATCTGGACAAGTTCTTGCTG
ACGAGGCACCAGCCCCTGCATTTCTTGGCAGAGCTTGCCGGCAAGCTTCG
GCTGTCCCCTCAAGAGATGCTCGGCATCAAGGCTCCCATGGGGTCGCCCG
TTGTGCAGCCCCGGGCACCTGGCGGCGGGATGGGGGTTGTCATGCCTGGC
AGGAATGATCCTGTAGGCACGCGCGAAGAGGTGACGCAGCTGCTGAACTA
CTGGCTGCGATTTTGCAACGAGAACCCTGTGTCCGACGAGAAGACTGCAC
CGGCGATGCTGCAAGTATTGGCTCAGCGGAAGACTCTGCTAACGGACGAA
TCGACCGACCGGTTCTTGCGAGTGGCGACGGAGCTGGTGGTGGAGGCTTG
TCTCAAGAGCAGCAGACCCTCGACGCCCACGGCGGCCGCAGGCGCTGGCG
CGGATGACAAGGCGAAGGCCAACAGCAACACCCCGCAGCTCTCTTACGCT
GTGGTGGACCCCTACGTGCGGCTTTTGGTGATGCTGATCCGTTCGAAGAA
AGCAACCGACCCTTCGGTGGCCGTGAACCAGCGACTCGCCATGCTGAACA
AGGTCCTGTCTACCGTTGTGAGGGTGCTGATGCAGGATGTGGAAGCTAAG
AAGGCTGCCACAGAGGCACCAGTGTCGTCGTCGCCGGGCGGCGGTAGCAG
CAATAGCGGTGCGTTTGACCAGAGGCCCTACTTTAGGATCCTGCTCTGCA
TGGTGAAGGACATGAACAAGCCCAACCGCCACCTGGACAACAGCAACCTG
CAGGTGCTGGCGGCCTTTGCGTCAGCGTTCCACGCCCTGCAGCCGGCAGC
GTGCCCCGTCTTCGCGTTCGCGTGGCTCGAGTTGGTGTCACACCGAAACT
TCATGCCTAACCTGCTGCTCGTGAAGCAGAACAAGGGATGGTCGAACATG
CACCGGTTGTTGGTGGACCTCCTGATCTTCATGGAGCCGCATCTGCGCCG
GCCGTCCCTGCTGGAAGCCGTCCGTCTGCTGTACACAGGCATGCTACGCA
CGCTACTGGTCCTTCTCCATGACTTTCCAGAGTTCCTCTGCGACTACCAC
CTGAGCTTTTGCGATGTGATTCCGCCCTCGTGCATCCAGCTGCGGAACCT
TGTGCTTTCCGCTTTCCCGCGCAGCATGAGGCTCCCGGACCCTTTCACAC
CCAACTTGAAGGTGGACCTGCTGCCGGAGATCGCGCTGGCGCCGAGAGTG
CTGAGCAACTACGTGGCGGCCTTGTCTCACAACGGCATCCGTGGAGATCT
GGACAAGTTCTTGCTGACGAGGCACCAGCCCCTGCATTTCTTGGCAGAGC
TTGCCGGCAAGCTTCGGCTGTCCCCTCAAGAGGCTGCGCACACTGGCATG
ACGTACAACGTGGCGTGCATTAACGCTCTAGTGGTGTACGTGGGAAGCCA
GGCAATCCTACAGCTCAACAACAAGACTCCTGTCATCACCCACTCTGCCC
CGATGGACGTGTTCCACCAGGCTGCGCACACTGGCATGACGTACAACGTG
GCGTGCATTAACGCTCTAGTGGTGTACGTGGGAAGCCAGGCAATCCTACA
GCTCAACAACAAGACTCCTGTCATCACCCACTCTGCCCCGATGGACGTGT
TCCACCAGCTGGCGAACAAATTGGACCCTGAGGGGAGATATTTCTTCCTT
AACGCGGTGGCCAATCAGCTGCGCTATCCCAACCAGCATACGCACTACTT
CAGCTGTGTGTTACTTTATCTGTTCGCCGAGGCCCAGTCAGAGATGGTGC
AGGAGCAGATCACACGGATCCTCCTCGAAAGGCTTATCGTGCACCGTCCC
CACCCGCTGGCGAACAAATTGGACCCTGAGGGGAGATATTTCTTCCTTAA
CGCGGTGGCCAATCAGCTGCGCTATCCCAACCAGCATACGCACTACTTCA
GCTGTGTGTTACTTTATCTGTTCGCCGAGGCCCAGTCAGAGATGGTGCAG
GAGCAGATCACACGGATCCTCCTCGAAAGGCTTATCGTGCACCGTCCCCA
CCCGTGGGGCGTCTTGATCACCTTCATTGAGCTCATCAAGAATCCGCGGT
ACAGCTTCTGGAGTCATAGCTTCACGCACTGCGCTCCGGAGCTAGAGCGA
GTTTTCGAGAGTGTCGCGCGCAGTTGCATGACGCCCGGCGCGGCGGGCGC
TGGGGCGGGGGCTGAGGATGACGGTGTTGCCGCCGGCACGGCACAGTAGT
GGGGCGTCTTGATCACCTTCATTGAGCTCATCAAGAATCCGCGGTACAGC
TTCTGGAGTCATAGCTTCACGCACTGCGCTCCGGAGCTAGAGCGAGTTTT
CGAGAGTGTCGCGCGCAGTTGCATGACGCCCGGCGCGGCGGGCGCTGGGG
CGGGGGCTGAGGATGACGGTGTTGCCGCCGGCACGGCACAGTAG
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