|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-13_003480.1 |
| Exons | 3 |
| Model size | 1908 |
| Cds size | 1908 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13815.2342.1 >prot_H-paniculata_contig13815.2342.1 ID=prot_H-paniculata_contig13815.2342.1|Name=mRNA_H-paniculata_contig13815.2342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=636bp
DLEDLLRSVEDMDGDALGELSLDLQDLSSLGDFSGLGRLDFSSDDDDIVA
MLDNDQHDGDDRVDKAPDFGEGGSGERGGSSPDTVGRTATTAARLSVSKD
DAGVSAAANLGAGRRVWKAGDGEGEAGGEGSIADIFPGALERRPQGGGKG
PTEGDDESEYESSEYESSEYESSEYEVSKNKEESSERGSPESGGKEEQSG
CGRPDETHTGSGGGDDDDGMDDDDGGSAMGTFEASPQRAAVGEGGKENGE
VCAGEEKESTMTPADGRCLVGSGRGVDGRDTSGVNQVQVEGVDDGAVVQR
QMRTGRLDRDNGGDRGMAGGDGAVGNDDRVEGKEAVQGLGVVAGGEEGAD
KAAAEGGGNGDVERVFAQEDSDDDGEADTDVTDTDITDTDEADTDEADTD
EADSGDQDKEERSYSGVDRSGASNNHEERAGQVRGGGGGSSSEEWATEGE
TVEGPSAGNLPEEDDDLMSDSGAGSEGQGYRKEASLGKDAESSDWSDDDD
VEGASRSSGCCSDSDDDEKDDDDDDDDDDDDDDDGGDDSDGDSSVEEQPS
QEESAEEKNKEEAGAIEQEDSEECSQSLEDDERAHEADVMEEEGPQGITM
EEWLDSQTREPVGVSIPPRKTLSQLLEEGLPEVSV* back to topmRNA from alignment at H-paniculata_contig13815:122..2497- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13815.2342.1 ID=mRNA_H-paniculata_contig13815.2342.1|Name=mRNA_H-paniculata_contig13815.2342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2376bp|location=Sequence derived from alignment at H-paniculata_contig13815:122..2497- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATCTGGAAGATCTTCTTCGTTCCGTTGAAGATATGGACGGAGACGCGCT
CGGCGAGCTATCGCTAGATCTTCAAGATCTGTCTAGCTTGGGCGATTTCA
GCGGCCTGGGGCGCCTGGATTTCTCAAGCGATGATGACGACATCGTCGCC
ATGTTGGATAACGATCAGCACGATGGTGACGACCGTGTCGATAAGGCCCC
TGACTTCGGTGAGGGTGGCAGTGGTGAGCGGGGTGGCAGTAGCCCCGATA
CTGTGGGAAGAACAGCAACAACAGCCGCTAGGCTATCCGTATCCAAGGAC
GATGCTGGTGTATCCGCTGCAGCGAATTTGGGAGCAGGACGAAGGGTATG
GAAAGCTGGGGATGGTGAAGGGGAAGCAGGAGGGGAAGGATCGATTGCGG
ACATCTTCCCGGGGGCCTTGGAGCGGCGGCCGCAGGGGGGCGGGAAGGGA
CCCACGGAAGGTGATGATGAGAGTGAGTACGAAAGCAGCGAATACGAAAG
TAGTGAATACGAAAGCAGCGAATACGAGGTGAGCAAAAATAAGGAAGAGT
CATCTGAAAGGGGCAGTCCAGAAAGCGGAGGCAAGGAAGAACAGTCTGGA
TGTGGTCGTCCAGATGAGACACACACGGGAAGTGGTGGTGGTGATGATGA
TGATGGAATGGATGATGATGATGGCGGCTCGGCAATGGGGACCTTCGAGG
CGTCTCCACAGCGGGCAGCGGTAGGGGAGGGGGGAAAAGAAAACGGTGAG
GTCTGTGCAGGAGAAGAGAAAGAGAGCACAATGACTCCCGCAGATGGGCG
ATGCCTTGTAGGTAGCGGCCGTGGAGTTGACGGTCGAGATACCAGTGGAG
TCAATCAGGTACAGGTGGAGGGTGTGGATGACGGTGCGGTCGTCCAACGC
CAAATGAGGACAGGCAGACTAGACCGGGATAATGGAGGGGATCGTGGTAT
GGCCGGCGGAGATGGTGCCGTGGGGAACGACGATAGAGTGGAGGGAAAGG
AGGCAGTGCAAGGGTTGGGTGTAGTGGCGGGTGGGGAGGAGGGGGCGGAT
AAGGCAGCTGCTGAAGGAGGCGGAAATGGGGATGTGGAAAGGGTATTTGC
CCAAGAGGACAGTGATGATGATGGTGAAGCTGATACTGATGTAACTGATA
CTGATATAACTGATACTGATGAAGCTGATACTGATGAAGCTGATACTGAT
GAAGCGGATAGTGGTGATCAAGACAAAGAAGAACGTTCTTATAGTGGCGT
GGACCGTTCCGGCGCGTCGAACAATCACGAGGAACGCGCAGGGCAAGTGC
GAGGCGGCGGGGGTGGTAGTAGTAGCGAAGAATGGGCAACGGAAGGCGAA
ACCGTCGAAGGGCCTTCTGCTGGAAATCTTCCAGAAGAGGACGACGATCT
AATGAGCGACTCTGGCGCTGGATCAGAAGGCCAAGGATATCGTAAGGAAG
CAAGCTTAGGTAAGGATGCAGAATCGTCTGATTGGAGCGATGATGACGAC
GTCGAAGGAGCGTCGAGAAGTTCGAGGAAATCAAAGAACGTTCCAGGAGG
GAAAGAGGCTAAGTACTTGGCGGATATGAGGACTTCCATCAGAGATCTTG
GGTCGTTGGCACGTACCACAGCCGGTGAGATGGACGAACTTTCGTCGTTC
TCCGACGATGATGCGTCAACTCTCGGAGATTCGTTGCTAGAAAATGATGA
GAGTCTTCTTGCGAATGACGAAGACGGAATAGGCTCGGGTTGTTGTTCCG
ATTCCGATGACGACGAGAAGGATGACGATGACGATGACGATGATGATGAT
GATGATGATGATGATGGCGGCGACGATAGTGACGGTGATTCGTCCGTGGA
AGAAGTTCCGTTTACTTCGACGGGGCAGAGCGAAATGAACACACAACAGC
CGCTCGTAGAGGGACCTTACTCTGCTGTCAAAGCGAAACAAGACATGGCA
ACCACACGAAAACAACCACAGCGACAGTTATCGCCCGGAAATGATGTCCC
GAAAAAATCGATCATGTTGGTGACGGAGACTAAGTCTACTAGGGGTACCG
AGAGAGCTACCCGCGCTGAACTAAAAAAAAGAAAAGGACGTGCTGAGAAC
CTGTCTAAGCAGCCATCACAAGAAGAGAGCGCAGAAGAGAAAAATAAAGA
AGAGGCGGGAGCCATCGAGCAGGAAGATTCCGAGGAATGTTCTCAGTCAT
TGGAAGATGACGAAAGAGCGCATGAGGCTGACGTTATGGAGGAGGAAGGC
CCACAGGGCATTACAATGGAGGAGTGGCTGGACAGTCAGACCCGAGAGCC
GGTAGGGGTTTCTATTCCTCCCCGGAAGACCCTCTCGCAGCTGTTAGAGG
AGGGATTGCCTGAGGTGAGCGTATGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig13815:122..2497- >mRNA_H-paniculata_contig13815.2342.1 ID=mRNA_H-paniculata_contig13815.2342.1|Name=mRNA_H-paniculata_contig13815.2342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3816bp|location=Sequence derived from alignment at H-paniculata_contig13815:122..2497- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATCTGGAAGATCTTCTTCGTTCCGTTGAAGATATGGACGGAGACGCGCT
CGGCGAGCTATCGCTAGATCTTCAAGATCTGTCTAGCTTGGGCGATTTCA
GCGGCCTGGGGCGCCTGGATTTCTCAAGCGATGATGACGACATCGTCGCC
ATGTTGGATAACGATCAGCACGATGGTGACGACCGTGTCGATAAGGCCCC
TGACTTCGGTGAGGGTGGCAGTGGTGAGCGGGGTGGCAGTAGCCCCGATA
CTGTGGGAAGAACAGCAACAACAGCCGCTAGGCTATCCGTATCCAAGGAC
GATGCTGGTGTATCCGCTGCAGCGAATTTGGGAGCAGGACGAAGGGTATG
GAAAGCTGGGGATGGTGAAGGGGAAGCAGGAGGGGAAGGATCGATTGCGG
ACATCTTCCCGGGGGCCTTGGAGCGGCGGCCGCAGGGGGGCGGGAAGGGA
CCCACGGAAGGTGATGATGAGAGTGAGTACGAAAGCAGCGAATACGAAAG
TAGTGAATACGAAAGCAGCGAATACGAGGTGAGCAAAAATAAGGAAGAGT
CATCTGAAAGGGGCAGTCCAGAAAGCGGAGGCAAGGAAGAACAGTCTGGA
TGTGGTCGTCCAGATGAGACACACACGGGAAGTGGTGGTGGTGATGATGA
TGATGGAATGGATGATGATGATGGCGGCTCGGCAATGGGGACCTTCGAGG
CGTCTCCACAGCGGGCAGCGGTAGGGGAGGGGGGAAAAGAAAACGGTGAG
GTCTGTGCAGGAGAAGAGAAAGAGAGCACAATGACTCCCGCAGATGGGCG
ATGCCTTGTAGGTAGCGGCCGTGGAGTTGACGGTCGAGATACCAGTGGAG
TCAATCAGGTACAGGTGGAGGGTGTGGATGACGGTGCGGTCGTCCAACGC
CAAATGAGGACAGGCAGACTAGACCGGGATAATGGAGGGGATCGTGGTAT
GGCCGGCGGAGATGGTGCCGTGGGGAACGACGATAGAGTGGAGGGAAAGG
AGGCAGTGCAAGGGTTGGGTGTAGTGGCGGGTGGGGAGGAGGGGGCGGAT
AAGGCAGCTGCTGAAGGAGGCGGAAATGGGGATGTGGAAAGGGTATTTGC
CCAAGAGGACAGTGATGATGATGGTGAAGCTGATACTGATGTAACTGATA
CTGATATAACTGATACTGATGAAGCTGATACTGATGAAGCTGATACTGAT
GAAGCGGATAGTGGTGATCAAGACAAAGAAGAACGTTCTTATAGTGGCGT
GGACCGTTCCGGCGCGTCGAACAATCACGAGGAACGCGCAGGGCAAGTGC
GAGGCGGCGGGGGTGGTAGTAGTAGCGAAGAATGGGCAACGGAAGGCGAA
ACCGTCGAAGGGCCTTCTGCTGGAAATCTTCCAGAAGAGGACGACGATCT
AATGAGCGACTCTGGCGCTGGATCAGAAGGCCAAGGATATCGTAAGGAAG
CAAGCTTAGGTAAGGATGCAGAATCGTCTGATTGGAGCGATGATGACGAC
GTCGAAGGAGCGTCGAGAAGATCTGGAAGATCTTCTTCGTTCCGTTGAAG
ATATGGACGGAGACGCGCTCGGCGAGCTATCGCTAGATCTTCAAGATCTG
TCTAGCTTGGGCGATTTCAGCGGCCTGGGGCGCCTGGATTTCTCAAGCGA
TGATGACGACATCGTCGCCATGTTGGATAACGATCAGCACGATGGTGACG
ACCGTGTCGATAAGGCCCCTGACTTCGGTGAGGGTGGCAGTGGTGAGCGG
GGTGGCAGTAGCCCCGATACTGTGGGAAGAACAGCAACAACAGCCGCTAG
GCTATCCGTATCCAAGGACGATGCTGGTGTATCCGCTGCAGCGAATTTGG
GAGCAGGACGAAGGGTATGGAAAGCTGGGGATGGTGAAGGGGAAGCAGGA
GGGGAAGGATCGATTGCGGACATCTTCCCGGGGGCCTTGGAGCGGCGGCC
GCAGGGGGGCGGGAAGGGACCCACGGAAGGTGATGATGAGAGTGAGTACG
AAAGCAGCGAATACGAAAGTAGTGAATACGAAAGCAGCGAATACGAGGTG
AGCAAAAATAAGGAAGAGTCATCTGAAAGGGGCAGTCCAGAAAGCGGAGG
CAAGGAAGAACAGTCTGGATGTGGTCGTCCAGATGAGACACACACGGGAA
GTGGTGGTGGTGATGATGATGATGGAATGGATGATGATGATGGCGGCTCG
GCAATGGGGACCTTCGAGGCGTCTCCACAGCGGGCAGCGGTAGGGGAGGG
GGGAAAAGAAAACGGTGAGGTCTGTGCAGGAGAAGAGAAAGAGAGCACAA
TGACTCCCGCAGATGGGCGATGCCTTGTAGGTAGCGGCCGTGGAGTTGAC
GGTCGAGATACCAGTGGAGTCAATCAGGTACAGGTGGAGGGTGTGGATGA
CGGTGCGGTCGTCCAACGCCAAATGAGGACAGGCAGACTAGACCGGGATA
ATGGAGGGGATCGTGGTATGGCCGGCGGAGATGGTGCCGTGGGGAACGAC
GATAGAGTGGAGGGAAAGGAGGCAGTGCAAGGGTTGGGTGTAGTGGCGGG
TGGGGAGGAGGGGGCGGATAAGGCAGCTGCTGAAGGAGGCGGAAATGGGG
ATGTGGAAAGGGTATTTGCCCAAGAGGACAGTGATGATGATGGTGAAGCT
GATACTGATGTAACTGATACTGATATAACTGATACTGATGAAGCTGATAC
TGATGAAGCTGATACTGATGAAGCGGATAGTGGTGATCAAGACAAAGAAG
AACGTTCTTATAGTGGCGTGGACCGTTCCGGCGCGTCGAACAATCACGAG
GAACGCGCAGGGCAAGTGCGAGGCGGCGGGGGTGGTAGTAGTAGCGAAGA
ATGGGCAACGGAAGGCGAAACCGTCGAAGGGCCTTCTGCTGGAAATCTTC
CAGAAGAGGACGACGATCTAATGAGCGACTCTGGCGCTGGATCAGAAGGC
CAAGGATATCGTAAGGAAGCAAGCTTAGGTAAGGATGCAGAATCGTCTGA
TTGGAGCGATGATGACGACGTCGAAGGAGCGTCGAGAAGCTCGGGTTGTT
GTTCCGATTCCGATGACGACGAGAAGGATGACGATGACGATGACGATGAT
GATGATGATGATGATGATGATGGCGGCGACGATAGTGACGGTGATTCGTC
CGTGGAAGAAGCTCGGGTTGTTGTTCCGATTCCGATGACGACGAGAAGGA
TGACGATGACGATGACGATGATGATGATGATGATGATGATGATGGCGGCG
ACGATAGTGACGGTGATTCGTCCGTGGAAGAACAGCCATCACAAGAAGAG
AGCGCAGAAGAGAAAAATAAAGAAGAGGCGGGAGCCATCGAGCAGGAAGA
TTCCGAGGAATGTTCTCAGTCATTGGAAGATGACGAAAGAGCGCATGAGG
CTGACGTTATGGAGGAGGAAGGCCCACAGGGCATTACAATGGAGGAGTGG
CTGGACAGTCAGACCCGAGAGCCGGTAGGGGTTTCTATTCCTCCCCGGAA
GACCCTCTCGCAGCTGTTAGAGGAGGGATTGCCTGAGGTGAGCGTATGAC
AGCCATCACAAGAAGAGAGCGCAGAAGAGAAAAATAAAGAAGAGGCGGGA
GCCATCGAGCAGGAAGATTCCGAGGAATGTTCTCAGTCATTGGAAGATGA
CGAAAGAGCGCATGAGGCTGACGTTATGGAGGAGGAAGGCCCACAGGGCA
TTACAATGGAGGAGTGGCTGGACAGTCAGACCCGAGAGCCGGTAGGGGTT
TCTATTCCTCCCCGGAAGACCCTCTCGCAGCTGTTAGAGGAGGGATTGCC
TGAGGTGAGCGTATGA back to top
|