mRNA_H-paniculata_contig13813.2341.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: D8LCZ8_ECTSI (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ8_ECTSI) HSP 1 Score: 257 bits (656), Expect = 2.320e-83 Identity = 131/142 (92.25%), Postives = 139/142 (97.89%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEV 426 +EG V+AVK+EGG NRAEHIRK+VDGGIAV+GHVGLTPQAISVLGGFRAQGRTAVKARQ++DDALAVQEAGAFAVVVECVPSPVAK+VTEALEIPTIGIGAGP TSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEV Sbjct: 101 KEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEV 242
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A4D9CXI1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXI1_9STRA) HSP 1 Score: 214 bits (545), Expect = 4.050e-67 Identity = 110/149 (73.83%), Postives = 124/149 (83.22%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 +EG +AVK+EGG +RA + KIV GIAV+GHVGLTPQAISVLGGFRAQGRTAVKAR L+DDALA+QEAGAFAVVVECVP+PVA+++TEALEIPTIGIGAGP T GQVLVYHDMLGM HPHH FVPRFCK YA +G + F Sbjct: 86 KEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVYHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESF 234
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A5D6YGP1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YGP1_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.660e-67 Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 +EG + VK+EGG R + IR IV+GGIAV+GHVGL PQ ISVLGGFRAQGRTA +A +++ DALAVQEAGAFAVV+ECVPSPVAK VTE LEIPTIGIGAGP TSGQVLVYHD+LGMLQHPHHAQFVP+FCK YA VGE + E+ Sbjct: 157 KEGGADCVKIEGGRGRTKTIRTIVEGGIAVMGHVGLLPQHISVLGGFRAQGRTAAQAEEIIKDALAVQEAGAFAVVLECVPSPVAKQVTELLEIPTIGIGAGPETSGQVLVYHDLLGMLQHPHHAQFVPKFCKRYADVGERIRIGLEEY 305
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: K3W4X2_GLOUD (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W4X2_GLOUD) HSP 1 Score: 215 bits (547), Expect = 1.480e-66 Identity = 109/149 (73.15%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 +EG + VK+EGG RA+ I+ IVDGGIAV+GHVGL PQ ISVLGGFRAQGRTAV+A Q+++DALAVQEAGAFAVV+ECVPSPVAK VTE L +PTIGIGAGP TSGQVLV+HD+LGMLQHPHHAQ VP+FCK YA VGE + E+ Sbjct: 160 KEGGADCVKIEGGRERAKTIKLIVDGGIAVMGHVGLRPQHISVLGGFRAQGRTAVQAEQIIEDALAVQEAGAFAVVLECVPSPVAKQVTELLRVPTIGIGAGPDTSGQVLVFHDLLGMLQHPHHAQHVPKFCKRYADVGERIRIGLEEY 308
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A8K1FM13_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM13_PYTOL) HSP 1 Score: 215 bits (548), Expect = 1.750e-66 Identity = 108/149 (72.48%), Postives = 127/149 (85.23%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 QEG + VK+EGG RAE IR +V+GGIAV+GH+GL PQ ISVLGGFRAQGRTA +A Q+++DALAVQEAGAFAVVVECVP+PVAK+VTE L+IPTIGIGAGP TSGQVLV+HD+LGMLQHPHHAQ VP+FC+ YA VGE + E+ Sbjct: 181 QEGGADCVKIEGGKERAETIRTLVNGGIAVMGHIGLRPQHISVLGGFRAQGRTATQAEQIIEDALAVQEAGAFAVVVECVPTPVAKAVTELLKIPTIGIGAGPETSGQVLVFHDLLGMLQHPHHAQHVPKFCRRYADVGERIRVGLEEY 329
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A024UEE9_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEE9_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.940e-66 Identity = 108/149 (72.48%), Postives = 128/149 (85.91%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 +EG V+ VK+EGG RA+ IR +VDGGIAV+GHVGL PQAISVLGGFRAQGRTA +A Q+++DALAVQ+AGAFAVV+ECVPS VAK+VT+ L++PTIGIGAGP TSGQVLV+HD+LGMLQHPHHAQ VP+FCK YA VGE + EF Sbjct: 143 KEGGVDCVKIEGGVERAKTIRMLVDGGIAVMGHVGLRPQAISVLGGFRAQGRTAKQANQIIEDALAVQKAGAFAVVLECVPSVVAKAVTDILDVPTIGIGAGPHTSGQVLVFHDVLGMLQHPHHAQHVPKFCKKYADVGERIRQGLEEF 291
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A7S2W1C3_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1C3_9STRA) HSP 1 Score: 210 bits (534), Expect = 4.470e-66 Identity = 101/144 (70.14%), Postives = 124/144 (86.11%), Query Frame = 1 Query: 16 NAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 +AVK+EGG +RA +RKIV GG+AV+GH+GLTPQAISV GGFRAQGRT VKAR+LLDDALA+Q+AGAFA+V+EC+P+PV K ++E+LEIPTIGIGAGP TSGQVLV+HDMLGM HPHH QFVP FC+ YA+VG+ + +F Sbjct: 37 DAVKLEGGKDRASSVRKIVQGGVAVMGHIGLTPQAISVTGGFRAQGRTGVKARKLLDDALALQDAGAFAIVLECIPAPVGKVISESLEIPTIGIGAGPHTSGQVLVFHDMLGMTTHPHHEQFVPSFCRKYATVGDTIRRGLDDF 180
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A1V9ZI68_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZI68_9STRA) HSP 1 Score: 213 bits (542), Expect = 4.920e-66 Identity = 107/142 (75.35%), Postives = 126/142 (88.73%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEV 426 +EG V+ VK+EGG RAE I+ IVDGGIAV+GHVGL PQAISVLGGFRAQGRTA +A Q+++DALAVQ+AGAFAVVVECVPS VAK++T+ L+IPTIGIG+GP TSGQVLV+HD+LGMLQHPHHAQ VP+FCK YA VGE + Sbjct: 132 KEGGVDCVKIEGGVERAETIKTIVDGGIAVMGHVGLRPQAISVLGGFRAQGRTAKQAEQIIEDALAVQQAGAFAVVVECVPSVVAKALTDILDIPTIGIGSGPHTSGQVLVFHDLLGMLQHPHHAQHVPKFCKKYADVGERI 273
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: A0A1V9Z720_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z720_9STRA) HSP 1 Score: 212 bits (539), Expect = 9.930e-66 Identity = 106/142 (74.65%), Postives = 126/142 (88.73%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEV 426 +EG V+ VKVEGG+ RAE I+ +V+GGIAV+GHVGL PQAISVLGGFRAQGRTA +A Q+++DALAVQ AGAFAVV+ECVPS VAK+VT+ L+IPTIGIG+GP TSGQVLV+HD+LGML HPHHAQFVP+FCK YA VGE + Sbjct: 131 KEGGVDCVKVEGGAERAETIKTLVEGGIAVMGHVGLRPQAISVLGGFRAQGRTAKQAEQIIEDALAVQNAGAFAVVIECVPSVVAKAVTDILDIPTIGIGSGPNTSGQVLVFHDLLGMLTHPHHAQFVPKFCKKYADVGESI 272
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Match: W7TQW2_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQW2_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.510e-65 Identity = 109/149 (73.15%), Postives = 124/149 (83.22%), Query Frame = 1 Query: 1 QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQGRTAVKARQLLDDALAVQEAGAFAVVVECVPSPVAKSVTEALEIPTIGIGAGPFTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVPSRTSEF 447 +EG +AVK+EGG +RA + KIV GIAV+GHVGLTPQAISVLGGFRAQGRTAVKAR L+DDALA+QEAGAFAVVVECVP+PVA+++TEALEIPTIGIGAGP T GQVLV+HDMLGM HPHH FVPRFCK YA +G + F Sbjct: 164 KEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESF 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13813.2341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13813.2341.1 >prot_H-paniculata_contig13813.2341.1 ID=prot_H-paniculata_contig13813.2341.1|Name=mRNA_H-paniculata_contig13813.2341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp QEGKVNAVKVEGGSNRAEHIRKIVDGGIAVVGHVGLTPQAISVLGGFRAQback to top mRNA from alignment at H-paniculata_contig13813:4848..6164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13813.2341.1 ID=mRNA_H-paniculata_contig13813.2341.1|Name=mRNA_H-paniculata_contig13813.2341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1317bp|location=Sequence derived from alignment at H-paniculata_contig13813:4848..6164- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13813:4848..6164- >mRNA_H-paniculata_contig13813.2341.1 ID=mRNA_H-paniculata_contig13813.2341.1|Name=mRNA_H-paniculata_contig13813.2341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig13813:4848..6164- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |