mRNA_H-paniculata_contig13801.2334.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13801.2334.1
Unique NamemRNA_H-paniculata_contig13801.2334.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: D7FVZ3_ECTSI (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ3_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 2.410e-134
Identity = 193/247 (78.14%), Postives = 222/247 (89.88%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLITVADGTHNDTWEKGGLDYLRALESFVGEV 743
            GYRNPLEQGISYEDM+MPTLD + IHGWLLKSP+A KVPTLVY HGNAGNIG RL NARQMQLAIGCNVL+VDYRGYGKSEG PTEEG++LDVEASLRAL+ESPKSGV  +K+ILFGRSLGGAVALA  DRYP LVRAVI+ENTF+SVSHMVD ++P L+ +K  VLRL+W++EE+ R L RPVLYISGL+DEL+P WHMR+LYNA+P+SSGGGKR+ TV DGTHNDTWE+GGL+YL+AL SF+ EV
Sbjct:   42 GYRNPLEQGISYEDMYMPTLDGIKIHGWLLKSPEASKVPTLVYFHGNAGNIGFRLVNARQMQLAIGCNVLMVDYRGYGKSEGTPTEEGLVLDVEASLRALRESPKSGVHPDKLILFGRSLGGAVALAGADRYPDLVRAVIVENTFISVSHMVDKLMPMLSGIKWLVLRLRWDNEEKARRLTRPVLYISGLKDELIPPWHMRSLYNASPESSGGGKRIFTVKDGTHNDTWERGGLEYLQALRSFMEEV 288
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: A0A024UNQ4_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNQ4_9STRA)

HSP 1 Score: 257 bits (656), Expect = 3.980e-76
Identity = 129/248 (52.02%), Postives = 168/248 (67.74%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLITVADGTHNDTWEKGGLDYLRALESFVGEVI 746
            GYR P E GI YED+F+P  D V IH WL+K P   +V T+V+ HGNAGNIG RL NA +M   + CN+LLVDYRG+G SEG PTE G+ LD E  L  L     S VD +K+ILFGRSLGGAVA+ A    P  +  +I+ENTFLS+S MVD V+P+L+ VK  VLRL W +E R+ LL  P+L+++G RDELVP  HM+ L+     S+   +  + +  GTHND+W +GG+DY   L+SF+G V+
Sbjct:   56 GYRRPDEYGIDYEDVFIPCADGVKIHAWLMKQPQPKEVSTIVFFHGNAGNIGYRLPNAAKMFRHLECNILLVDYRGFGMSEGEPTERGLQLDAEGVLDYLHSRGASTVDSSKLILFGRSLGGAVAVYAATTRPKQIAGLILENTFLSISAMVDQVMPWLSHVKSVVLRLDWGNEGRIPLLTHPILFVAGERDELVPHTHMQRLHALAVKSTL--RAWLPIPRGTHNDSWMRGGMDYFYTLKSFIGNVV 301
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: K3XBT1_GLOUD (AB hydrolase-1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBT1_GLOUD)

HSP 1 Score: 251 bits (640), Expect = 2.240e-74
Identity = 125/249 (50.20%), Postives = 174/249 (69.88%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLI--TVADGTHNDTWEKGGLDYLRALESFVGEV 743
            GYR+P E  I YED+ +PT D V IH WL+K P+    PT+++ HGNAGNIG RL NA  +   +G NVLLVDYRG+G SEG P+E+G+ +D EA+L A+    +S +D + I++FGRSLGGAV++   ++ P  + AVI+ENTFLS+S MVD+++PFL+  KP VLR+ WNSE+ +  L  P+L+++G++DELVP  HM+TL+     S    KR +   VA+GTHNDTW +GG  Y  AL +F+  V
Sbjct:   55 GYRHPGEFNIDYEDLMIPTADGVRIHAWLMKQPNHSARPTIIFFHGNAGNIGYRLPNAVHLYRKVGANVLLVDYRGFGHSEGEPSEQGLKMDAEAALDAMYT--RSDIDKSSIVVFGRSLGGAVSVYLAEKAPSKIAAVILENTFLSISSMVDSLMPFLSYFKPIVLRIDWNSEKAMPKLTHPILFVAGMQDELVPHHHMKTLHKLAIAS----KRAVWLPVANGTHNDTWLRGGDRYFEALRAFLDSV 297
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: W4H415_9STRA (Hydrolase_4 domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H415_9STRA)

HSP 1 Score: 249 bits (636), Expect = 4.210e-73
Identity = 125/249 (50.20%), Postives = 167/249 (67.07%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRAL-KESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLITVADGTHNDTWEKGGLDYLRALESFVGEVI 746
            GYR+P E GI YED+F+P  D + IH WL+K P    VPT+V+ HGNAGNIG RL NA +M   + CN+LLVDYRG+G S+G PTE G+ LD E  +  L      S VD +K+I+FGRSLGGAVA+      P  V  +I+ENTFLS+S MVD V+P+L+ VKP VLRL W++E R+  L  P+L+++G RDELVP  HM+ L+     S    ++ + +  GTHND+W +GGLDY  AL+ F+   +
Sbjct:   56 GYRHPNEYGIDYEDVFIPCADGIKIHAWLMKQPQPTTVPTIVFFHGNAGNIGYRLPNAAKMYRHLECNILLVDYRGFGMSDGEPTERGLQLDAEGVVDYLHSRGASSVVDPSKLIVFGRSLGGAVAVYVASTRPTKVAGLIVENTFLSISAMVDQVMPWLSYVKPVVLRLDWSNEGRIPTLTHPILFVAGERDELVPHTHMQKLHALATKSIR--RQWLPIPRGTHNDSWMRGGLDYFFALKRFIDSAV 302
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: A0A6G0X0E5_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0E5_9STRA)

HSP 1 Score: 248 bits (632), Expect = 8.150e-73
Identity = 122/244 (50.00%), Postives = 166/244 (68.03%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLITVADGTHNDTWEKGGLDYLRALESFV 734
            GYR P E GI YED+F+   D V IH WL+K P    +PT+V+ HGNAGNIG RL NA +M   + CN+LLVDYRG+G S+GVPTEEG+  D +  +  L    +S +D  KI++FGRSLGGAVA+   +  P  +  +I+ENTFLS+S MVD V+P+LT +KP VL + WN+E R+R +  P+L+++G RDELVP  HM+ L+ +   SS   ++ + V  GTHND+W +GGLDY   L  F+
Sbjct:   56 GYRVPSEYGIDYEDVFVTCSDGVKIHSWLMKQPSGQFLPTIVFFHGNAGNIGYRLPNAAKMFRHLDCNILLVDYRGFGLSDGVPTEEGLQRDADGVIDYLHT--RSDIDPTKIVVFGRSLGGAVAIYLAESRPTKIAGLIVENTFLSISSMVDQVMPWLTYIKPIVLAIDWNNERRIRGVTLPILFVAGERDELVPHSHMQKLHASATKSSL--RKWLPVPRGTHNDSWLRGGLDYFHTLRQFI 295
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: A0A3M6VKP1_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKP1_9STRA)

HSP 1 Score: 245 bits (625), Expect = 9.180e-72
Identity = 123/246 (50.00%), Postives = 172/246 (69.92%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLI--TVADGTHNDTWEKGGLDYLRALESFV 734
            GYR+P E  I YED+ +P  D V I  WL+K  D    PTL++ HGNAGNIG RL NA Q+   +G N+LLVDYRG+G SEG P+E+G+ LD EA++ AL    ++ +D +K+++FGRSLGGAV++    + P  V A+++ENTFLS+S MVDA++PFLT VKP VLR+ WN+E  ++ +K+P+L+I+G++DELVP  HM  L +    S    +R++   V+DGTHNDTW +GG  Y   L+ FV
Sbjct:   52 GYRHPGEFSIDYEDLMIPCKDGVKISAWLMKQKDHSTRPTLIFFHGNAGNIGYRLPNAVQLYRKVGVNILLVDYRGFGHSEGDPSEKGLKLDAEAAVDALYA--RTDIDTSKLVVFGRSLGGAVSVYLAKKEPSKVAAIVLENTFLSISAMVDALMPFLTYVKPLVLRINWNNELDIQKVKQPILFIAGIQDELVPHSHMERLCSLATSS----QRVVWYPVSDGTHNDTWLRGGSKYYAELQKFV 291
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: H3H829_PHYRM (AB hydrolase-1 domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H829_PHYRM)

HSP 1 Score: 244 bits (622), Expect = 2.450e-71
Identity = 124/246 (50.41%), Postives = 172/246 (69.92%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLI--TVADGTHNDTWEKGGLDYLRALESFV 734
            GYR+P E  I YED+ +P  D V I+ WL+K  D    PTL++ HGNAGNIG RL NA Q+   +G N+LLVDYRG+G SEG P+EEG+ LD +A+L A+    ++ +D +K+++FGRSLGGAV++   ++ P  V AV++ENTFLS+S MVDA++PFLT VKP VLR+ WNSE  ++ LK+P+L+I+GL+DELVP +HM  L +    S    +R +   V+ GTHND+W +GG  Y   L  F+
Sbjct:   55 GYRHPGEFAIEYEDLMIPCKDGVKINAWLMKQKDHTTRPTLIFFHGNAGNIGYRLPNAVQLFRKVGVNILLVDYRGFGHSEGEPSEEGLKLDADAALDAMYA--RTDIDTSKLVVFGRSLGGAVSVYLAEKEPTRVAAVVLENTFLSISAMVDALMPFLTYVKPLVLRMDWNSELAIQKLKQPILFIAGLQDELVPHFHMERLRSLAISS----QRAVWYPVSGGTHNDSWLRGGEKYFSQLRGFL 294
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: A0A1V9YYC0_9STRA (Serine protease family S09X n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYC0_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.950e-71
Identity = 117/250 (46.80%), Postives = 172/250 (68.80%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLITVADGTHNDTWEKGGLDYLRALESFVGEVIYM 752
            GYR+P E GI +ED+++PT D +TIH WLLK  +  +VPT+V+ HGNAGNIG RL NA QM   +GCN+++VDYRG+G S G PTE+G+ +D EA++  L  S +  +D  K I FGRSLGGAVA+   +     + A+I+ENTFLS+S MVD+++P+L+ +K +VL + W++E R+  L  P+L++SG +DELVP +HM  L++    S    ++   +A GTHND+W +GG  Y  A+ +F+  +  M
Sbjct:   58 GYRHPGEYGIDFEDVYIPTKDGITIHAWLLKQANMKQVPTIVFFHGNAGNIGFRLPNAVQMYRMLGCNIVMVDYRGFGLSLGTPTEKGLQMDAEATIDYL--SMRQDLDNTKFIAFGRSLGGAVAIYLGEARSDKIAAIIVENTFLSISTMVDSLMPWLSYIKRYVLAIDWSNERRIPSLAHPILFLSGQKDELVPPFHMTKLHDIATQSKL--RKWYPIARGTHNDSWVQGGAPYFDAMRAFIERICEM 303
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: M4BQL6_HYAAE (AB hydrolase-1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQL6_HYAAE)

HSP 1 Score: 241 bits (614), Expect = 7.130e-71
Identity = 123/249 (49.40%), Postives = 174/249 (69.88%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLI--TVADGTHNDTWEKGGLDYLRALESFVGEV 743
            GYR+P E  I YED+ +P  D V I+ WL+K  D    PTL++ HGNAGNIG RL NA QM   +G NVLLVDYRG+G S+GVP+E+G+ +D EA + AL    ++ +D +KI++FGRSLGGAV++   ++ P  V AVI+EN+FLS+S MVDA++PFLT VK  VLR+ WN+E  +R + +P+L+I+G++DELVP  HM  L++    S    +R++   VA GTHND+W +GG +Y   L  F+ ++
Sbjct:    5 GYRHPGEYHIDYEDLMIPCKDGVKINAWLMKQRDHSSRPTLIFFHGNAGNIGHRLPNALQMYRKVGVNVLLVDYRGFGHSDGVPSEKGIKIDAEAVVDALYA--RTDIDTSKIVVFGRSLGGAVSVYLAEKEPSRVAAVILENSFLSISAMVDALMPFLTYVKFLVLRMDWNNELAIRKVTQPILFIAGMQDELVPHSHMERLHSLATSS----ERIVWYPVAGGTHNDSWLRGGDEYFSQLREFLDKL 247
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BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Match: G5A425_PHYSP (AB hydrolase-1 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G5A425_PHYSP)

HSP 1 Score: 240 bits (613), Expect = 4.920e-70
Identity = 124/246 (50.41%), Postives = 173/246 (70.33%), Query Frame = 3 
Query:    3 GYRNPLEQGISYEDMFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLAIGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKIILFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKPFVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGGKRLI--TVADGTHNDTWEKGGLDYLRALESFV 734
            GYR+P E GI YED+ +P  D V I+ WL+K  D +  PTL++ HGNAGNIG RL NA Q+   +G NVLLVDYRG+G SEG PTE+G+ LD EA+L A+    ++ +D +K+++FGRSLGGAV++   ++ P  V AV++ENTFLS+S +VD ++PFLT VKP VLR+ WNS + ++ +K+P+L+I+G++DELVP  HM+ L  A   SS   +R +   V  GTHND+W +GG  Y   L  F+
Sbjct:   55 GYRHPGEFGIDYEDLMIPCKDGVRINAWLMKQKDHNIRPTLIFFHGNAGNIGYRLPNAVQLFRKVGVNVLLVDYRGFGHSEGEPTEQGLKLDAEAALDAIYA--RTDIDTSKLVVFGRSLGGAVSVHLAEKEPSKVAAVVLENTFLSISAIVDVLMPFLTYVKPLVLRMDWNSAKGIQKIKQPILFIAGMQDELVPHSHMQQL-RALATSS---QRAVWYPVPGGTHNDSWLRGGDKYFSELRQFL 294
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13801.2334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ3_ECTSI2.410e-13478.14Hydrolase_4 domain-containing protein n=2 Tax=Ecto... [more]
A0A024UNQ4_9STRA3.980e-7652.02Hydrolase_4 domain-containing protein n=1 Tax=Apha... [more]
K3XBT1_GLOUD2.240e-7450.20AB hydrolase-1 domain-containing protein n=1 Tax=G... [more]
W4H415_9STRA4.210e-7350.20Hydrolase_4 domain-containing protein n=7 Tax=Apha... [more]
A0A6G0X0E5_9STRA8.150e-7350.00Hydrolase_4 domain-containing protein n=1 Tax=Apha... [more]
A0A3M6VKP1_9STRA9.180e-7250.00AB hydrolase-1 domain-containing protein n=1 Tax=P... [more]
H3H829_PHYRM2.450e-7150.41AB hydrolase-1 domain-containing protein n=2 Tax=P... [more]
A0A1V9YYC0_9STRA4.950e-7146.80Serine protease family S09X n=1 Tax=Thraustotheca ... [more]
M4BQL6_HYAAE7.130e-7149.40AB hydrolase-1 domain-containing protein n=1 Tax=H... [more]
G5A425_PHYSP4.920e-7050.41AB hydrolase-1 domain-containing protein n=5 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13801contigH-paniculata_contig13801:595..6234 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue1.4e-102
Seed eggNOG ortholog2880.D7FVZ3
Preferred namebem46
KEGG koko:K06889
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005783,GO:0005886,GO:0007275,GO:0008150,GO:0012505,GO:0016020,GO:0016787,GO:0016788,GO:0019866,GO:0022622,GO:0031090,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0048364,GO:0048731,GO:0048856,GO:0071944,GO:0099402
EggNOG free text desc.protein depalmitoylation
EggNOG OGsCOG1073@1,KOG4391@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons5
Model size1994
Cds size822
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929097.404379-UTR-H-paniculata_contig13801:594..6381622929097.404379-UTR-H-paniculata_contig13801:594..638Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13801 595..638 +
1691480730.2396982-UTR-H-paniculata_contig13801:594..6381691480730.2396982-UTR-H-paniculata_contig13801:594..638Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13801 595..638 +
1622929097.5208082-UTR-H-paniculata_contig13801:5106..62341622929097.5208082-UTR-H-paniculata_contig13801:5106..6234Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13801 5107..6234 +
1691480730.2961705-UTR-H-paniculata_contig13801:5106..62341691480730.2961705-UTR-H-paniculata_contig13801:5106..6234Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13801 5107..6234 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929097.4364662-CDS-H-paniculata_contig13801:638..7071622929097.4364662-CDS-H-paniculata_contig13801:638..707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 639..707 +
1691480730.2533324-CDS-H-paniculata_contig13801:638..7071691480730.2533324-CDS-H-paniculata_contig13801:638..707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 639..707 +
1622929097.4563184-CDS-H-paniculata_contig13801:1627..17431622929097.4563184-CDS-H-paniculata_contig13801:1627..1743Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 1628..1743 +
1691480730.2658057-CDS-H-paniculata_contig13801:1627..17431691480730.2658057-CDS-H-paniculata_contig13801:1627..1743Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 1628..1743 +
1622929097.471388-CDS-H-paniculata_contig13801:2436..26141622929097.471388-CDS-H-paniculata_contig13801:2436..2614Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 2437..2614 +
1691480730.273307-CDS-H-paniculata_contig13801:2436..26141691480730.273307-CDS-H-paniculata_contig13801:2436..2614Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 2437..2614 +
1622929097.4880128-CDS-H-paniculata_contig13801:3601..37611622929097.4880128-CDS-H-paniculata_contig13801:3601..3761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 3602..3761 +
1691480730.2805629-CDS-H-paniculata_contig13801:3601..37611691480730.2805629-CDS-H-paniculata_contig13801:3601..3761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 3602..3761 +
1622929097.502365-CDS-H-paniculata_contig13801:4807..51061622929097.502365-CDS-H-paniculata_contig13801:4807..5106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 4808..5106 +
1691480730.2881536-CDS-H-paniculata_contig13801:4807..51061691480730.2881536-CDS-H-paniculata_contig13801:4807..5106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13801 4808..5106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13801.2334.1prot_H-paniculata_contig13801.2334.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13801 639..5106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13801.2334.1

>prot_H-paniculata_contig13801.2334.1 ID=prot_H-paniculata_contig13801.2334.1|Name=mRNA_H-paniculata_contig13801.2334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp
MFMPTLDHVTIHGWLLKSPDAHKVPTLVYLHGNAGNIGMRLTNARQMQLA
IGCNVLLVDYRGYGKSEGVPTEEGMILDVEASLRALKESPKSGVDLNKII
LFGRSLGGAVALAAVDRYPHLVRAVIIENTFLSVSHMVDAVLPFLTRVKP
FVLRLKWNSEERVRLLKRPVLYISGLRDELVPSWHMRTLYNATPDSSGGG
KRLITVADGTHNDTWEKGGLDYLRALESFVGEVIYMYVYIYIYRPRVCAC
AWRYIEERRPLQLYNVISSACMW*
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mRNA from alignment at H-paniculata_contig13801:595..6234+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13801.2334.1 ID=mRNA_H-paniculata_contig13801.2334.1|Name=mRNA_H-paniculata_contig13801.2334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5640bp|location=Sequence derived from alignment at H-paniculata_contig13801:595..6234+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCTATCGAAATCCTCTGGAGCAGGGCATATCGTACGAGGATATGTTC
ATGCCCACCTTGGACCATGTGACGATCCATGGCTGGCTGCTCAAAAGTCC
TGACGCCCACAAGGTACGTGCGATCGATGCGGGGAGATAAACCACATTTT
TTTTTTTTAATGTATCATCCCGACCAGCCAAATGTTCTTCTTGGGGATGA
TATAGTTAGTAATCGTCTGTCGGTTGCATTATGGTTCTCTGAGGCAATCC
AAAGTCATCGCAACATGCTAAAGTATTGGAATGTGTGTCATCTAGTGTAG
AGCGGCGTAGTACAAAAGACGGGGTGATGCAGCGAACAAAGCAGAAAAAT
GTGCATGGTTTTTGGCGAGCTCGTTCCGAATTTCCCAGCCCAAGTTGATC
CGAAAAATGATATGGCACAAAATATCGATATTGATCATTTGCATGTGTGG
ATAGAGGAGGATCAAGTGGTGTCTCTGTTCTCTCGCTGTTCTTATTCTTT
AATTTCGCTCCGCCATGTAAAGGGGGTGCTCGAGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGCGCGCG
CGCGTACATCCGTTATGATTGGAGGACTTCATTCATGTATATTTTTGTCA
CGTGGCGTAGCACTAAATTAATCCGGTTGTTTGTATTTGTCTGAGTGGTG
CATATCGATTCTCTCATTCTCGCTAAGAAAAGCAGTTCGCCCCCCCACAC
ACACACACACTCTCTCTCTCTCTCTCTATCTCTTTCCGTACTGGTCGTCG
GTCATTGGTGGCTCGTGCTAACAACAACTATCTGATGACCGGTATATATC
GCTTTGAAGCTGTTCACTGCTAGTAGGAGCTGTGTATGCAGGCTAGCTGC
TACACAAGCTCGGCGTGAAATGTGTGACATTTCATGTATAGTGCATTTTT
TGCCCACTTCCCCTTCTCTCCCTGTTGTTTGGGTAATCTTTTTTTTTTTT
TTTTTGTTTAATTCGTTCATGCTGGATGCGAAGGTGCCGACTCTAGTATA
TCTACACGGCAACGCGGGCAATATTGGAATGAGGCTGACCAACGCACGTC
AGATGCAGCTGGCGATAGGATGCAACGTCCTCCTCGTCGACTATCGCGGG
TACACAAGGACCAAACACGAAAATTCAACACATTCAACGATTATTGGCAC
CAATATTGGTCGTAAAGGAGAAACGGAGGTCTTTTTTTTGTTTCTCCATC
CCTTCTTATATATATATATATATGAGCTTTTAGATTGCTTGTGTGCGGGA
TGTTGTGTTTTGCAGCCGATCCCGTCTTCACCATGACCTCTCTTGGAGGG
TCCATGTTTTGATGTTTAGGGGTTGGCAATACCGCCGTCCAATCAGTCGT
GTAGTCTTTTGTAGGTGTTGAAGCCGAAGCGGGTACGAAGAGGCAGTGTA
CTGATAAATATTAAATCATGAGCGTCTTTTACATAAAAATCTTGGAAACC
TTGCATAGCTTCACATACAGATTCTGTCAAGATAATGACATCTATTTATA
AATACACCACTTTTGTGACCATTGCGATCCTTTTTGGCGGGGATATTCGT
TTGCTGAGGGAAGATTTGTGTGTGTGCGTTTTGTTATCGCGATCATCATA
TCATATCATGAATCGAGCCCCCAGCACCTTAGTTATGTTGGTTTGTGGGA
TCGGATAGCAAAATAATTAACTAAATAATAACCTATTTTCACTGCACCGC
TCGGGTCACGGTCGTATTTTTCACCACGTACATATGGTCTGATTGCCATG
CAACGTGGATCTATCTCTGGATCTATCTGGCTGAACTGCTAGGTACGGTA
AGAGCGAGGGAGTGCCCACTGAAGAAGGAATGATCCTGGACGTGGAGGCC
AGCCTTCGTGCACTAAAGGAGAGCCCCAAGTCAGGGGTGGATTTGAACAA
GATTATTTTGTTTGGGAGGTCGCTAGGCGGCGCTGTTGCTCTGGCTGCGG
TGGACAGGTATCCGCACTTGGTGAGAAAGTGATTGTTCCGTGTATTCTGT
TAGATGCGAAAAAGTCTTGTGATTTTCTTCTTCGCGTGCGGCTTTTTTGT
GTTAGGTGGTTTTGCTGGGGGGTTTTGCGTGTATTGCGTGTTCTTTCACG
GTTGTCTTTTTCTTGTAAAGTGTTGTTACTATTGTTCGGTTTTGTCATGT
CTGTGTCTGTGAGATGCGTGTGAAATGCGTGTGAGATGCGTGTCTGTTCT
ATGGTTGTGTGCACTCTGGAGGCTGGTGCCAACGTTCCCCTTGTGCTGGT
TGTTACGAGAAAAAAAAAAAAAAATGTGCTGTTTTTTTTTTTTTTTCCAT
CGCAAGTGCGGAAGATCCTTCGCGTTTCTACCGTAAAACCCGGAGATGTC
GTGCTGGTGGGGTGCAAAACGTTTTTTTTAAACGCAACGATCTCGAGAAC
GCAGACGGTGTGCGGTCGAAATAGCCCATCTTGTCGACAGACAAGACAGA
TCTCTCCGCGAGACCTTTCCCAGGGCACGTTATTCATTCGTTGTCAGTAG
CACCGTAGTTGTCGACACAATCGCGTTTGAAAATCGTTAGCACCGTGTTG
CCGACTGGTCGTGTATAGCTTCTTCGGTCGTTTCTCAAGGTTTTTGTTTT
TTTTAAATATGTAACGACAGTCGTCAGTACATGGTTACTCGTGTAGTTTT
ACAAAGATCAATAGATAGCAAAACAAAACAAAAAAAAACTCGTCTCGTTA
TTCCTATTTACAGTAATTTTCGATTTCTTGTGTCACTGAAGTTGATGTCC
TTCCTTTCTTCGGGCTATTCCAAGTACTAGGTCGCAAAAGTAAATGGTTG
TCCTGGCCGTGTGTTCAACATTTTTTTATTTTAGGTTGGTTGTCTTAAGA
GCGTGATGGATGTGTTTGTTTGTTTTTTCGATAATTTGTAACTCAACGTG
ACACCCACGATGGTCACTCCAAAATCTTGTTTTGTTGGACCCGGGGGCGG
GTTGCAGGTGAGGGCGGTGATCATCGAGAACACTTTCTTGAGCGTGTCGC
ACATGGTGGACGCCGTGCTTCCGTTTTTGACTCGCGTGAAGCCGTTCGTC
CTGCGCCTCAAATGGAACAGTGAAGAACGAGTCCGGCTGCTGAAGCGGCC
TGTCCTGTACATTTCAGGTACAAGTGCCATGTCGTGTCTATTCAGCTCAC
CTTAGTGACGGATTATCCTACTAGTCGAAGAAGGAATAGGAGAACGTTAC
AAGGTGAACGGGGGGGTAATTTTTCTGTTGGACTTTCGTCGATGAAGGAA
CAGAAAACAGTCCTAGAAGTTTTTTTTTAACGATATTAAGATGTCGAGAA
TAGATCTTGTGTTTTTCCTCTTTTTTAAACCGGAACTGTTGGTGGAGAGT
GCGCGCGATTATCCCCACCCTCCCCTGCGGTCGATAGTGACTAAATGTTC
TTAGTTTGGAAATTTTTGTGATTTAATTGACTTGTGAATGTACAGAAGAT
GACTTGTTTATCACGTACCACGTACATATATATATATATATATATAGTAG
CAACCCCGGTGTTTTTGCGTTTTTGCGTTTTTGCGGTTTTGCGTTTTTTT
TTTTTTCAATTTTGGTTGTCTTGAGAAGCAAAACGTTGTGCTTTCGAAAC
GATATATGTAAGTAGCTAAATCATGACAGATATACTTGGACAGGATATTC
CAGACAATATTGGTGAGGCTCGAGGTATATATTTATTTAACAAAACAGGA
TACATTTCGTTGTCGACAGGGTCAACTGTAATGCCTTTTTCTTTTTTTTT
TTAATTACCCCAAATGTGGTGCGTATTACTGCTATCCTCACCCGCTTGTA
GATTCTACTTTACTTACCCATATCTGAATCGTGTGGCGTCGCACGTTGCC
CATTTCTTGTGCTGGTTTCGATACTGATATCTTGTGCTGCTTTTATGATT
GCAACTCTGATTGTACCTGTATATTTACTTCCTTGAAGAGTTACTGAAAA
AAAAAACGAAAAAAAAAACGGGCATCCCGGGAAAAATGAAAAGAACGTGG
GTCGGTAGCACTAACACACGTACGTACTACCATGTTTTTTTGCTGCAGAA
GGATCCGTTTTTATTTTTTTACCATGATATGTACAAAGTCCCCACATCCC
CTATAATTGTTTTTTTGTCTGACGGAAGTCGAATTACCGAACACGATCCG
GCCCCACGAGTAGGTCTTCGCGACGAGCTCGTCCCCTCGTGGCACATGCG
GACTCTCTACAACGCCACACCGGATAGCTCCGGCGGCGGAAAACGCCTCA
TTACAGTGGCGGATGGCACGCACAATGACACGTGGGAGAAGGGAGGGCTA
GACTACCTGCGAGCATTAGAATCATTCGTCGGAGAGGTAATATATATGTA
TGTATATATATATATATATCGTCCTCGTGTGTGCGCATGTGCTTGGAGGT
ATATAGAGGAGAGGAGGCCTCTACAACTTTACAACGTAATAAGTAGTGCG
TGTATGTGGTAGGCGTTTTCGTGTGCGGGTTTTGGTGGCTAGTAAATGAT
ATCCGCGGAAGCCGTTTTTTTTTTTTGTTGTATGGTGCCAGGTATTTTTT
CTTCCTGCTTTATTTTGGTATTTTGGTATTACAGTACCGGATATATTTCC
TGTCGGTTCTATATAGATCGAACGACGTCGGTCAGCTGAAGCTGTACCCT
TGAGCAGAGACCACAGCTCGTGCCCACATGTGGACTATGTATACTGTACC
GAACTACTGTTGCACCAGTCCCTCGGGATAGTCGTCCAGGATTATCTCCC
ACGAAGGCAAAATGTCTAGTTAGTCACTTGTTACTTCTTTCTTGAGAGGT
TGTCAATATTTCCAGAGTATGACTTATAGTCGATGAAAATCTGTATAGTC
CTCGAACCAATTTATGGTGTAACGGTCCGGCGAGGCTATAGCCAGCTAAC
AGCTTGCATATATTTATATACAACTGTGCATCTAATGAACAAACAATATA
TGAAGAGAACACACAAGACTGTTGTAGTCGGTCCCAGCTTGTGACAGTTT
GGGTTGGCGATGGAAGAAAGTTGATTGTGGTAAGACAGAGACTTACCGCC
TCTTGTACTCTTTCCCCCCTTGTTAAACGAGTAAATATCAGGTTATGGCC
GAGAAAATAATTTCCCCAGAGGGTGTTGAAGGGGCATAGAAGACGGCAGC
GTATAGGCCGAGGGGCGATGATGGCGAGTGCAAACCCCCGCGATCCGGGG
ATGGTAACGCGGAGGCGATCAACGGCGACATGCTCGGTAGGGGCGAAAGT
GGGCCGCACGCACCCACAGCAGTACACAGGCGTTTTTTGTGCGAAATTCC
TCTGCAGTAAGATACGTCCGTGGTGGCTTGGTGTGTCGTGGTTTTGTTGG
TTGAAACATGTTAAAAATAATGTTTGTTGTTTGTTGTCGCCCCGCCTACG
TACCGCCATGTGTTCGCGTAGTCGGTGGAAGTCGGTATATTGAAACGTTT
GATGCCGCACGGAGTGCTTTTTTGGACTACTTCGTTGTAAAAGGTTTGGG
CGCGCGGGGTGGGCAGAGGAACATGTAGGAAGAGGGGGTCGGGGAATGTA
GGAATCTGGGCGTTGTGGGTCACAATGCGAGATATCAACG
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Coding sequence (CDS) from alignment at H-paniculata_contig13801:595..6234+

>mRNA_H-paniculata_contig13801.2334.1 ID=mRNA_H-paniculata_contig13801.2334.1|Name=mRNA_H-paniculata_contig13801.2334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at H-paniculata_contig13801:595..6234+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCATGCCCACCTTGGACCATGTGACGATCCATGGCTGGCTGCTCAA
AAGTCCTGACGCCCACAAGATGTTCATGCCCACCTTGGACCATGTGACGA
TCCATGGCTGGCTGCTCAAAAGTCCTGACGCCCACAAGGTGCCGACTCTA
GTATATCTACACGGCAACGCGGGCAATATTGGAATGAGGCTGACCAACGC
ACGTCAGATGCAGCTGGCGATAGGATGCAACGTCCTCCTCGTCGACTATC
GCGGGTGCCGACTCTAGTATATCTACACGGCAACGCGGGCAATATTGGAA
TGAGGCTGACCAACGCACGTCAGATGCAGCTGGCGATAGGATGCAACGTC
CTCCTCGTCGACTATCGCGGGTACGGTAAGAGCGAGGGAGTGCCCACTGA
AGAAGGAATGATCCTGGACGTGGAGGCCAGCCTTCGTGCACTAAAGGAGA
GCCCCAAGTCAGGGGTGGATTTGAACAAGATTATTTTGTTTGGGAGGTCG
CTAGGCGGCGCTGTTGCTCTGGCTGCGGTGGACAGGTATCCGCACTTGGT
ACGGTAAGAGCGAGGGAGTGCCCACTGAAGAAGGAATGATCCTGGACGTG
GAGGCCAGCCTTCGTGCACTAAAGGAGAGCCCCAAGTCAGGGGTGGATTT
GAACAAGATTATTTTGTTTGGGAGGTCGCTAGGCGGCGCTGTTGCTCTGG
CTGCGGTGGACAGGTATCCGCACTTGGTGAGGGCGGTGATCATCGAGAAC
ACTTTCTTGAGCGTGTCGCACATGGTGGACGCCGTGCTTCCGTTTTTGAC
TCGCGTGAAGCCGTTCGTCCTGCGCCTCAAATGGAACAGTGAAGAACGAG
TCCGGCTGCTGAAGCGGCCTGTCCTGTACATTTCAGGTGAGGGCGGTGAT
CATCGAGAACACTTTCTTGAGCGTGTCGCACATGGTGGACGCCGTGCTTC
CGTTTTTGACTCGCGTGAAGCCGTTCGTCCTGCGCCTCAAATGGAACAGT
GAAGAACGAGTCCGGCTGCTGAAGCGGCCTGTCCTGTACATTTCAGGTCT
TCGCGACGAGCTCGTCCCCTCGTGGCACATGCGGACTCTCTACAACGCCA
CACCGGATAGCTCCGGCGGCGGAAAACGCCTCATTACAGTGGCGGATGGC
ACGCACAATGACACGTGGGAGAAGGGAGGGCTAGACTACCTGCGAGCATT
AGAATCATTCGTCGGAGAGGTAATATATATGTATGTATATATATATATAT
ATCGTCCTCGTGTGTGCGCATGTGCTTGGAGGTATATAGAGGAGAGGAGG
CCTCTACAACTTTACAACGTAATAAGTAGTGCGTGTATGTGGTAGGTCTT
CGCGACGAGCTCGTCCCCTCGTGGCACATGCGGACTCTCTACAACGCCAC
ACCGGATAGCTCCGGCGGCGGAAAACGCCTCATTACAGTGGCGGATGGCA
CGCACAATGACACGTGGGAGAAGGGAGGGCTAGACTACCTGCGAGCATTA
GAATCATTCGTCGGAGAGGTAATATATATGTATGTATATATATATATATA
TCGTCCTCGTGTGTGCGCATGTGCTTGGAGGTATATAGAGGAGAGGAGGC
CTCTACAACTTTACAACGTAATAAGTAGTGCGTGTATGTGGTAG
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