prot_H-paniculata_contig13762.2317.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13762.2317.1
Unique Nameprot_H-paniculata_contig13762.2317.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length542
Homology
BLAST of mRNA_H-paniculata_contig13762.2317.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 2.950e-36
Identity = 185/503 (36.78%), Postives = 221/503 (43.94%), Query Frame = 0
Query:   22 LWVSRGGVPPKLNLLPGQRLGEE-VLASLGESSGEQEDDDSDGELIVGIRARAGGAVGSGXXXGMAAVPGDGYDAFVGSQGEGVPVESAAGVVSGVAVAGMGDGGTXXXXXXXXXXXXXXXXXXXXXXXXGVTSADERLVEGRGILEGGEEEEKWDSRLDAMTRAAWLSSKQASCRAYNSNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVPPFAGGASMTGPAVTATAAIAAGTSLDPVSQPPFDGIITGT--------GDPPKLPPRIGTPAPTGAAVDSSSFGVQNTDAGASIGGLPAGAAGVGKTQVTVEEVGPVAASTGRLGERRGAGRAGAKRGVTGTVGENSAASPLRGTGGDXXXXXXXXXDSDRVAGSGFLYRVVVDGLNILITLKLRDSLLLLAQSSLDVVLAALPELSKPSKTLLAKESEGGVR-GEVNRRTSLDLKQFIDKPFNLPGRRRDSGSL---TPFSRPERTSHDSVQSAT 511
             W SRGGVPP+L LLP    G +  LA + ESS ++    +       +R R  G   S            G +   G++  G    S A      AVA   + G      XXXXXXXXXXXXXX        +A  ++  GR           WD  L A+TRAAWL SKQAS R +NSN                                                            A++  AA TS DP ++                  G   +  PR G  +   +A  S   G  +   GA  G LP           +     P AA+     +  G G + A     GT G +S   P  G  G          D +RVAGSGFLYRVV DGLN+LITLKLRDS+LLL QS L+V LA LP L KPSK LLAKE EG V  GE+ RRTSLDLKQF DKP  LPGR+RDSGSL   TPFS+ ER S DS  S T
Sbjct: 2804 FWASRGGVPPRLELLPSHSHGHDGALADVDESSADEGTAAAGRHDSPSVRRRKSGDASS-----------PGVEERAGTRASGDCTASEAPEAG--AVAAAAEPGVAADITXXXXXXXXXXXXXXDGDENASAAAHRQVGSGR-----------WDEHLQAVTRAAWLGSKQASSRGFNSN------------------------------------------------------------ASSVSAASTSNDPTTRIAXXXXXGAAQLSARGAGGANERFFPRGGRDS-CHSARSSRDLGDNDRREGAPAGALP----------TSPPRSPPPAAAASPDTDLGGDGVSRA-----GTPGGSSR--PEGGRDGRTTRVAAAAAD-ERVAGSGFLYRVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKEREGEVLPGELRRRTSLDLKQFTDKPLALPGRKRDSGSLGSATPFSKAERQSEDSAYSLT 3203          
BLAST of mRNA_H-paniculata_contig13762.2317.1 vs. uniprot
Match: A0A6H5KJB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 4.730e-6
Identity = 60/186 (32.26%), Postives = 77/186 (41.40%), Query Frame = 0
Query:   22 LWVSRGGVPPKLNLLPGQRLGEE-VLASLGESSGEQEDDDSDGELIVGIRARAGGAVGSGXXXGMAAV--PGDGYDAFVGSQGEGVPVES---AAGVVSGVAVAGMGDGGTXXXXXXXXXXXXXXXXXXXXXXXXGVTSADERLVEGRGILEGGEEEEKWDSRLDAMTRAAWLSSKQASCRAYNSN 201
             W SRGGVPP+L LLP    G +  LA + ESS ++    +       +R R GG   S      A+    GDG  +     G  V       AA + +  A AG+  GG                           ++A  R V G G         +WD  L A+TRAAWL SKQAS R +NSN
Sbjct:  355 FWASRGGVPPRLELLPSHSHGHDGALADVDESSADEGTAAAGRHDSPSVRKRKGGYASSRGMEEPASTRASGDGTASEAPKAGAAVAAAEPGVAADITTAAATAGVDGGGDEDGDEN-------------------ASAAAHRQV-GSG---------RWDEHLQAVTRAAWLGSKQASSRGFNSN 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13762.2317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7K0_ECTSI2.950e-3636.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJB8_9PHAE4.730e-632.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13762contigH-paniculata_contig13762:1112..6330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13762.2317.1mRNA_H-paniculata_contig13762.2317.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13762 1112..6347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13762.2317.1 ID=prot_H-paniculata_contig13762.2317.1|Name=mRNA_H-paniculata_contig13762.2317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=542bp
MEGEDDLRSEDIRGAGGEGAGLWVSRGGVPPKLNLLPGQRLGEEVLASLG
ESSGEQEDDDSDGELIVGIRARAGGAVGSGGGGGMAAVPGDGYDAFVGSQ
GEGVPVESAAGVVSGVAVAGMGDGGTTATAAAAAVVVALGPRSADDDAGG
GVTSADERLVEGRGILEGGEEEEKWDSRLDAMTRAAWLSSKQASCRAYNS
NTSSSSAASGVGRSSSSSTAPASAFAHCAAGASATTTTTATAAATVPPFA
GGASMTGPAVTATAAIAAGTSLDPVSQPPFDGIITGTGDPPKLPPRIGTP
APTGAAVDSSSFGVQNTDAGASIGGLPAGAAGVGKTQVTVEEVGPVAAST
GRLGERRGAGRAGAKRGVTGTVGENSAASPLRGTGGDGGGGGGGGGDSDR
VAGSGFLYRVVVDGLNILITLKLRDSLLLLAQSSLDVVLAALPELSKPSK
TLLAKESEGGVRGEVNRRTSLDLKQFIDKPFNLPGRRRDSGSLTPFSRPE
RTSHDSVQSATSSRPSMDSLSSKGRRGSGVSSSTAGGVKTTA
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