mRNA_H-paniculata_contig13750.2310.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: D8LCJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ8_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.520e-64 Identity = 99/146 (67.81%), Postives = 119/146 (81.51%), Query Frame = 1 Query: 1 DSVCGDSRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQHIIEVSDR 438 D+ C S FLCDLVAFLHD++G +E +LRRLGF+VMRPGLPL ++EI+D TR + +GGCCG AELMKLFAYTLTEYHRVVHLDTDT++LQ LD +LD ESLLYT DINM S +PV+PVQGGFLVVRPD VFQ ++++ R Sbjct: 87 DAACETSEFLCDLVAFLHDEIGLGTENLLRRLGFRVMRPGLPLSLDEIEDPVTRGRIAKGGCCGLAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEESLLYTADINMGSSYTPVMPVQGGFLVVRPDPEVFQDLVQIVKR 232
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A6H5JYN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN4_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.120e-61 Identity = 97/146 (66.44%), Postives = 119/146 (81.51%), Query Frame = 1 Query: 1 DSVCGDSRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQHIIEVSDR 438 D+ C S FLCDLVAFLHD++ +E +LRRLGF+VMRPGLPL+++EI+D TR + +GGCCG AELMKLFAYTLTEYHRVVHLDTDT++LQ LD +LD ESLLYT D+NM + +PV+PVQGGFLVVRPD VFQ +++V R Sbjct: 145 DAACETSEFLCDLVAFLHDEIELGTENLLRRLGFRVMRPGLPLNLDEIEDPVTRARIAKGGCCGPAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEESLLYTPDVNMGNSYTPVMPVQGGFLVVRPDPEVFQDLVQVVKR 290
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: W7U427_9STRA (Glycosyl transferase, family 8 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U427_9STRA) HSP 1 Score: 128 bits (321), Expect = 9.910e-34 Identity = 61/137 (44.53%), Postives = 95/137 (69.34%), Query Frame = 1 Query: 19 SRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILD-ENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQHIIE 426 S++ D +A +H +V S A LRR G+KV+ +P+D+ +IQ R H+ + GCCGA EL+KL+A+TLT+YHRVVHLD D++LLQ +D + D E+++ +YT D M ++ VQGGFL++RP+V F+ +++ Sbjct: 3 SKYGVDFIAIVHPNV-TTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVD 138
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A835Z761_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z761_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.370e-33 Identity = 64/146 (43.84%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 1 DSVCGDSRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQHIIEVSDR 438 DSVC S++ C VAF+ V L LG++V+ G+PLD+ +I+ EK RN + + GCCGA+EL+KL+A++LTEY+RV+HLD D L+LQ +D ++ + L+YTTD+ MA + +PVQGGFL+ RP F ++ + + Sbjct: 110 DSVCRRSKYDCAKVAFVDPSVRAERRGPLSALGWRVLERGVPLDIAQIEGEKLRNRIDKSGCCGASELIKLWAFSLTEYYRVLHLDVDALMLQPVDELIARDVELVYTTDVKMAPN-AHNMPVQGGFLLCRPSQATFDELVGIVKK 254
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A7S0SWJ4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWJ4_9STRA) HSP 1 Score: 122 bits (305), Expect = 8.780e-31 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 19 SRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVF---QHIIEVSDR 438 S++ +L+AF+ +V S +L+ G+KV+ LP++++EI+++K + + + GCCGA E +KL+A+TLTEYHRVVHLD D+++LQ++D + D ++ +LYT D M SPV P QGGFLVVRP + F Q II D Sbjct: 34 SKYDAELIAFVVSNV-QTSRPILQAYGWKVIEKKLPVELDEIENKKYADRMKDSGCCGADEFLKLWAFTLTEYHRVVHLDMDSVVLQNMDELYDIDKEMLYTGDYGMKGD-SPVPPAQGGFLVVRPSLTTFSKFQEIIRKGDH 174
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A482SAB1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAB1_9ARCH) HSP 1 Score: 115 bits (288), Expect = 7.170e-28 Identity = 58/133 (43.61%), Postives = 89/133 (66.92%), Query Frame = 1 Query: 19 SRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQH 417 S F DL+AF+ V + +LR+ G+K++ LP+ ++EIQ++ + + + GCCGA E +KL+AYTLT+Y RV+HLD D ++ ++LD ++ ++ LLYT D NM SPV P QGGFLV+RP + F+ Sbjct: 92 SDFNIDLIAFVTKKV-KTTRTVLRKFGWKILEKDLPVALSEIQNKDYADRMKDSGCCGADEFLKLWAYTLTQYERVIHLDMDCIIFKNLDKLVRIDKELLYTGDYNMKGG-SPVAPAQGGFLVIRPSLERFKE 222
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A836C6W8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W8_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.550e-27 Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 1 DSVCGDSRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQ-DEKTRNHVVEGGCCGAAELMKLFAYTLTEYH------RVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQHIIEV 429 D C S + C VA L +V ++L G++V+ GLPLD++ I+ D + R GCCGA EL+KL+A+TLTEYH RV+H+D D ++LQ LD + ++ L+YT D MAS +PVQGGFL++RP + +FQ ++E+ Sbjct: 60 DLSCAHSDYQCKFVALLDPEVPVQRRSLLTAHGWRVLERGLPLDLDTIKTDLRERLKTTTAGCCGAKELIKLWAFTLTEYHSADSNNRVIHVDIDAMVLQPLDEWIAKDVDLVYTEDAPMASN-KHNMPVQGGFLLLRPSLEIFQTLVEI 208
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A7S0XDH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDH7_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.780e-26 Identity = 54/120 (45.00%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 40 VAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPV-LPVQGGFLVVRP 396 VAF+H V A +L R+GF V+ P++V+ I R + GCCGA+ELMKL+AY L +Y RV+HLD DT++L+ +++ N SL+YTTD NMA+ +PVQGGF++++P Sbjct: 89 VAFVHPTVSIA-RPILSRIGFHVIETPTPVNVSAISGSFLREKINNNGCCGASELMKLYAYRLLQYDRVIHLDADTIVLKEFSELIERNYSLIYTTDPNMATHQGEQRMPVQGGFIILQP 207
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A7S3NFL9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFL9_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.910e-26 Identity = 60/148 (40.54%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 13 GDSRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENE------SLLYTTDINMASK---ISPVLPVQGGFLVVRPDVVVFQHIIEV 429 G S++ L+AF+ + + L G++V+ LPL + +IQ E RN + + GCCGA EL+KL+A+TLTEYHRVVH+D D L+LQ LD + D+ + +YT D MA +P P QGGF++ +PD+ VF +++V Sbjct: 101 GVSKYGVALIAFVSPAISKKTRTALEACGYRVLERDLPLRIADIQGEYLRNRIEKNGCCGAWELLKLYAWTLTEYHRVVHVDMDVLILQPLDELYDDLKIWGPQVRAVYTYDWTMARPPWGTNP--PTQGGFIIAKPDIEVFNSLVDV 246
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Match: A0A7S3HGE2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGE2_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.340e-26 Identity = 59/140 (42.14%), Postives = 89/140 (63.57%), Query Frame = 1 Query: 19 SRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDEKTRNHVVEGGCCGAAELMKLFAYTLTEYHRVVHLDTDTLLLQSLDPILDENESLLYTTDINMASKISPVLPVQGGFLVVRPDVVVFQHIIEVSDR 438 S + DLVAF+ V +S L + G+KV+R LP+ ++EIQ++ + GCCGA E +KL+AYTLT+YHRV+HLD D+++ +++D I + ++ L+T D NM PVQGGFLVV+P + F+ E+ R Sbjct: 126 SAYDVDLVAFVAPPV-VSSIPTLEKFGWKVLRRELPVRIDEIQNQDYAQKMKNSGCCGADEFLKLWAYTLTDYHRVIHLDMDSIIFKNMDQIFNIDKEFLFTGDYNMKGNCK-YPPVQGGFLVVQPSMQTFEDFKEIIRR 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13750.2310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13750.2310.1 >prot_H-paniculata_contig13750.2310.1 ID=prot_H-paniculata_contig13750.2310.1|Name=mRNA_H-paniculata_contig13750.2310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp DSVCGDSRFLCDLVAFLHDDVGPASEAMLRRLGFKVMRPGLPLDVNEIQDback to top mRNA from alignment at H-paniculata_contig13750:3152..6730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13750.2310.1 ID=mRNA_H-paniculata_contig13750.2310.1|Name=mRNA_H-paniculata_contig13750.2310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3579bp|location=Sequence derived from alignment at H-paniculata_contig13750:3152..6730- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13750:3152..6730- >mRNA_H-paniculata_contig13750.2310.1 ID=mRNA_H-paniculata_contig13750.2310.1|Name=mRNA_H-paniculata_contig13750.2310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at H-paniculata_contig13750:3152..6730- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |