prot_H-paniculata_contig13738.2299.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13738.2299.1
Unique Nameprot_H-paniculata_contig13738.2299.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length50
Homology
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BLAST of mRNA_H-paniculata_contig13738.2299.1 vs. uniprot
Match: D7G0I7_ECTSI (PhyA2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I7_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 5.040e-19
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:    1 VRLLSHLSEDNPPGRVAITIPGCSEGEDLLCPLSKLRALAIRSVDAECIT 50
            +R L+ LS  NPPGRVAITIPGCS+GE+LLCPLSKLRALAIRSVDAECIT
Sbjct:  400 IRELTDLSPSNPPGRVAITIPGCSQGEELLCPLSKLRALAIRSVDAECIT 449
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13738.2299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0I7_ECTSI5.040e-1984.00PhyA2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029033Histidine phosphatase superfamilyGENE3D3.40.50.1240coord: 1..50
e-value: 5.4E-8
score: 34.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13738contigH-paniculata_contig13738:398..547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13738.2299.1mRNA_H-paniculata_contig13738.2299.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13738 398..547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13738.2299.1 ID=prot_H-paniculata_contig13738.2299.1|Name=mRNA_H-paniculata_contig13738.2299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp
VRLLSHLSEDNPPGRVAITIPGCSEGEDLLCPLSKLRALAIRSVDAECIT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam