prot_H-paniculata_contig13730.2296.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13730.2296.1
Unique Nameprot_H-paniculata_contig13730.2296.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A7S4QQZ2_9STRA (Alanine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQZ2_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.420e-46
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H +W SSP VPHDD TLLF NAGMNQ+KPLFLGT DP L+MSKL RA NSQKCIRAGGKHNDLDDVGKDVYH TFFEMLGNW
Sbjct:   39 HTYWPSSPCVPHDDPTLLFANAGMNQYKPLFLGTCDPNLEMSKLKRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 120          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A7S1TRR3_9STRA (Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.950e-46
Identity = 71/82 (86.59%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H FW SSPVVPHDD TLLF NAGMNQ+KPLFLGT DP+L M+KLTRA NSQKCIRAGGKHNDLDDVGKDVYH TFFEMLGNW
Sbjct:   63 HVFWPSSPVVPHDDPTLLFANAGMNQYKPLFLGTCDPSLDMAKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 144          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A0D2ZWB7_BRAOL (Alanine--tRNA ligase n=2 Tax=Brassica TaxID=3705 RepID=A0A0D2ZWB7_BRAOL)

HSP 1 Score: 151 bits (382), Expect = 3.810e-45
Identity = 66/82 (80.49%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H FW SSPVVPH+D TLLF NAGMNQ+KP+FLGT DP  ++SKLTRA N+QKCIRAGGKHNDLDDVGKD YH TFFEMLGNW
Sbjct:   71 HKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 152          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A7J8PB19_GOSRA (Alanine--tRNA ligase n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A7J8PB19_GOSRA)

HSP 1 Score: 153 bits (387), Expect = 4.670e-45
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H +W+SSPVVPH+D TLLF NAGMNQ+KP+FLGTVDP   MSKLTRA N+QKCIRAGGKHNDLDDVGKD YH TFFEMLGNW
Sbjct:   85 HVYWNSSPVVPHNDPTLLFANAGMNQYKPIFLGTVDPNTAMSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 166          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A7S2Y168_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y168_9STRA)

HSP 1 Score: 159 bits (403), Expect = 7.860e-45
Identity = 72/82 (87.80%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H FW SSPVVPHDD TLLF NAGMNQ+KPLFLGT DP L MSKLTRA NSQKCIRAGGKHNDLDDVGKDVYH TFFEMLGNW
Sbjct:   71 HTFWPSSPVVPHDDPTLLFANAGMNQYKPLFLGTCDPKLPMSKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 152          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.330e-44
Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H FW SSPVVPHDD TLLF NAGMNQFKPLFLGTVDP+L +SKLTRA NSQKCIRAGGKHNDLDDVGKDVYH TFFEMLGNW
Sbjct:   36 HTFWPSSPVVPHDDPTLLFANAGMNQFKPLFLGTVDPSLPLSKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 117          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.380e-44
Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H FW SSPVVPHDD TLLF NAGMNQFKPLFLGT DPAL +SKLTRA NSQKCIRAGGKHNDLDDVGKD+YH TFFEMLGNW
Sbjct:   50 HTFWKSSPVVPHDDPTLLFANAGMNQFKPLFLGTADPALPLSKLTRATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNW 131          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A7R9WBZ2_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBZ2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.500e-44
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H FW SSP VPHDD TLLF NAGMNQ+KPLFLGT DP L++SKL RA NSQKCIRAGGKHNDLDDVGKDVYH T FEMLGNW
Sbjct:   11 HTFWPSSPCVPHDDPTLLFANAGMNQYKPLFLGTCDPNLELSKLKRAVNSQKCIRAGGKHNDLDDVGKDVYHHTMFEMLGNW 92          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A2P5AYY8_PARAD (Alanine--tRNA ligase n=1 Tax=Parasponia andersonii TaxID=3476 RepID=A0A2P5AYY8_PARAD)

HSP 1 Score: 148 bits (374), Expect = 1.520e-43
Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H F+ SSPVVPH+D TLLF NAGMNQFKP+FLG VDP   +SKLTRA N+QKCIRAGGKHNDLDDVGKD YH TFFEMLGNW
Sbjct:   89 HVFYKSSPVVPHNDPTLLFANAGMNQFKPIFLGQVDPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 170          
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Match: A0A7J8T7Z0_GOSDV (Alanine--tRNA ligase (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8T7Z0_GOSDV)

HSP 1 Score: 152 bits (383), Expect = 1.760e-43
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANSQKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW 82
            H  W SSPVVPH+D TLLF NAGMNQFKP+FLGTVDP   MSKLTRA N+QKCIRAGGKHNDLDDVGKD YH TFFEMLGNW
Sbjct:   80 HVNWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTVDPNTAMSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13730.2296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4QQZ2_9STRA1.420e-4684.15Alanine--tRNA ligase n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1TRR3_9STRA7.950e-4686.59Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas... [more]
A0A0D2ZWB7_BRAOL3.810e-4580.49Alanine--tRNA ligase n=2 Tax=Brassica TaxID=3705 R... [more]
A0A7J8PB19_GOSRA4.670e-4581.71Alanine--tRNA ligase n=1 Tax=Gossypium raimondii T... [more]
A0A7S2Y168_9STRA7.860e-4587.80Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835Z4U5_9STRA1.330e-4489.02Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
D7FPP9_ECTSI3.380e-4487.80Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A7R9WBZ2_9STRA3.500e-4482.93Alanine--tRNA ligase (Fragment) n=1 Tax=Pseudictyo... [more]
A0A2P5AYY8_PARAD1.520e-4380.49Alanine--tRNA ligase n=1 Tax=Parasponia andersonii... [more]
A0A7J8T7Z0_GOSDV1.760e-4382.93Alanine--tRNA ligase (Fragment) n=2 Tax=Gossypium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 1..82
e-value: 1.7E-38
score: 132.5
NoneNo IPR availableGENE3D3.30.930.10coord: 1..82
e-value: 2.4E-36
score: 127.3
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 1..82
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 1..82
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..82
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..82
score: 17.236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13730contigH-paniculata_contig13730:5295..6102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13730.2296.1mRNA_H-paniculata_contig13730.2296.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13730 5295..6102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13730.2296.1 ID=prot_H-paniculata_contig13730.2296.1|Name=mRNA_H-paniculata_contig13730.2296.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
HAFWSSSPVVPHDDLTLLFVNAGMNQFKPLFLGTVDPALKMSKLTRAANS
QKCIRAGGKHNDLDDVGKDVYHDTFFEMLGNW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018164Ala-tRNA-synth_IIc_N
IPR018165Ala-tRNA-synth_IIc_core