mRNA_H-paniculata_contig13699.2274.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: A0A6H5KHN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN7_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.280e-38 Identity = 80/184 (43.48%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVV---ARVDHDHEES-----RLRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDH 525 EG+LE RLA +WS+ + VL L +GL FPL G +VV LRL RP VG+ T D +L+ +WKM+ GVPPGAIE+++++CC LG V+WR GV+ A D D +E + LEYS EL V+GD++ APW ++ + VR M +DFPGLR SL CP H Sbjct: 132 EGVLEPRLARTMWSNGLSEYVLPTLTTLGLAFPLEADPAGGLVVLLRLTPGRPERVGKVMDTFYLDQTPALNASWKMFLGVPPGAIEKVLTRCCSLGGVTVFWRSGVLVHSALRDEDGDEDGSDIFAVVLEYSSSDNELTAQVFGDISTQAPWTVLSYAASAVRLMLMDFPGLRSRGSLKCPQH 315
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 143 bits (361), Expect = 2.620e-36 Identity = 78/184 (42.39%), Postives = 108/184 (58.70%), Query Frame = 1 Query: 4 GILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARVDHDH----EESRLRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIM 540 G+LE LA LW D + + VL L +GLT+PL D +VV LRL E RP DVG+ D LSV WK++ GVPPGAIE+++++CC LGT +WR GV+ + L +EYS DK E+ V+G ++ AAPWA + +V + M +FPGLRW A+L CP H +++ Sbjct: 677 GVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQ 860
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 143 bits (360), Expect = 3.060e-36 Identity = 72/187 (38.50%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARVDHDHEESR----LRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIMGI 546 EG+LE RLA +W D + VL L +G TFPL + D +VV LRL RP VG+ T + S +WK++ GVPPGA+E+++++CC LG +WR GV+ ++ R + LEYS EL ++GD++ A W + V + V+ M +DFPGLRW SL CP+H + ++ + Sbjct: 277 EGVLEPRLAYAMWPDGLSEYVLPTLASLGFTFPLENDPDEGLVVLLRLTPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFV 463
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 4.710e-36 Identity = 77/187 (41.18%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVAR--VDHDHEESR----LRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIM 540 +G+LE RLA +W + + VL L +GLTFPL D +VV LRL RP VG T D +LS +WK++ GVPPGAIE+++++CC LG +WR GV+ + H R + LEYS EL ++GD++ APW ++ V + V M LDFPGLRW SL CP H + ++ Sbjct: 581 QGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTML 767
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 142 bits (358), Expect = 6.610e-36 Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 4 GILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARVDHDH----EESRLRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIM 540 G+LE LA LW D + + VL L +GLT+PL D +VV LRL E RP DVG+ D LSV WK++ GVPPGAIE+++++CC LGT +WR GV+ + + L +EYS D E+ V+G + AAPWA + +V + M +FPGLRW ASL CP H +++ Sbjct: 641 GVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQ 824
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 142 bits (358), Expect = 6.740e-36 Identity = 76/185 (41.08%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARVDHDHEES----RLRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIM 540 EG+LE RLA +W D + VL L +GLTFPL + G +VV LRL RP VG+ T D + + TWK++ GVPPGAIE+++++CC LG ++WR GV+ E+ LEYS + L ++GD + +A W + V + V M LDFPGLRW SL CP H + I+ Sbjct: 961 EGVLEPRLAYCMWPDGLSEYVLPTLASLGLTFPLENDPTGGLVVLLRLKPDRPERVGKVIYTFCLDQTPAFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTIL 1145
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.190e-35 Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARVDHDHEESR----LRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIMGI 546 EG+LE +LA +W D + VL L +GLTFPL + D +VV LRL RP VG+ T + S +WK++ GVPPGA+E+++++CC LG +WR GV+ ++ R + LEYS EL ++GD++ A W + V + VR M +DFPGLRW SL CP H + ++ + Sbjct: 416 EGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFV 602
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.200e-35 Identity = 73/184 (39.67%), Postives = 103/184 (55.98%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARVDHDHEESR----LRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENI 537 EG+LE RLA +W D + VL L +GLTFPL D +VV LRL RP VG+ T + S +W+++ GVPPGAIE+++++CC LG +WR GV+ + R + EYS EL ++GD++ +APW + V + V M +DFPGLRW+ SL CP H + Sbjct: 511 EGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEM 694
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 140 bits (353), Expect = 3.080e-35 Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVARV---DHD-HEESRLRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIM 540 +G+LE RLA +W + + VL L +GLTFPL + G +VV LRL RP VG+ T D + S +WK++ GVP GAIE+++++CC LG +WR GV+ D D HE + LEYS EL ++GD++ APW + V + VR M LDFPGLR SL CP H + ++ Sbjct: 625 QGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAML 809
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 139 bits (349), Expect = 9.070e-35 Identity = 73/188 (38.83%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 1 EGILERRLAEFLWSD-VWHQVLAVLQEIGLTFPLP-DVRDGTVVVPLRLPETRPVDVGQNFATMLPDDQISLSVTWKMYDGVPPGAIERIMSKCCHLGTAVVYWRLGVVAR----VDHDHEESRLRLEYSIDKKELVGAVWGDLTKAAPWAIICCVCTVVRKMTLDFPGLRWDASLGCPDHAENIMGI 546 EG+LE RLA+ +W D + VL L +GL FPL D +G VV+ LRL RP VG+ T + +WK++ GVPPGA+E+++++CC LG +WR GV+ V + + +EYS ELV V+GD+++ PW + V + V M +DFPGLRW SL CP H + ++ + Sbjct: 560 EGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLENDPAEGLVVL-LRLKPHRPESVGEVIDTFCSGLTPAFRASWKVFLGVPPGAVEKVLTRCCALGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELVAQVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQHGDGMLFV 746 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13699.2274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13699.2274.1 >prot_H-paniculata_contig13699.2274.1 ID=prot_H-paniculata_contig13699.2274.1|Name=mRNA_H-paniculata_contig13699.2274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp EGILERRLAEFLWSDVWHQVLAVLQEIGLTFPLPDVRDGTVVVPLRLPETback to top mRNA from alignment at H-paniculata_contig13699:1707..2252+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13699.2274.1 ID=mRNA_H-paniculata_contig13699.2274.1|Name=mRNA_H-paniculata_contig13699.2274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=546bp|location=Sequence derived from alignment at H-paniculata_contig13699:1707..2252+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13699:1707..2252+ >mRNA_H-paniculata_contig13699.2274.1 ID=mRNA_H-paniculata_contig13699.2274.1|Name=mRNA_H-paniculata_contig13699.2274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at H-paniculata_contig13699:1707..2252+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |