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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 2292 |
| Cds size | 1734 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1369.2271.1 >prot_H-paniculata_contig1369.2271.1 ID=prot_H-paniculata_contig1369.2271.1|Name=mRNA_H-paniculata_contig1369.2271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=578bp
MVLRCASIAAGASINIAKRPWCTASGAVVARLSKVGLSSTAKETSRPSIN
DRQRRRGITGGHGGDRSGYRHVTRSGGEVGQAAGPSGDIMTIRKFYMDRL
KQARLQRDWNIAKQIFEEALARDDARLVMNSYVYNSVIDAAAKCGKWKAA
VGMLKFMRIKGVNPDVVSYNSAVKACGDGGQWEKALSLLKEMQTEGIAPN
DRSYTSAIKACGYGGKSEHALSLLKEMQVAGIIPDAMCYNSTINACGEGG
QWDRALLLLEEMRTAGVVPDVVSYNSAIKACGDGGQWQQSLSLLREMRRE
GISPDNRSYNSAITACGNGDQWEQSLLLLAEMRAEGVAPTVVVFTSVIKA
CGDGGQWEQAISLLREMEAEGIAPNHITYDSVIRACGDGGQWKQSLSLLK
EMRTKDIVLNVMNYNSAMKACRESGRWEQVLPLLREMQVEGIASNLVSYT
SAIVACGDGGRWQQAWSLLKEMETEGIVSDVVSYNAAIKACGDAGQWERS
LALLREMQMGYVTPDMVSYNLAITACGKGDEPRQAVAILREMNGEGVPAA
DTRTYNATIFAFWRGAHSSQHKVEQTR* back to topmRNA from alignment at H-paniculata_contig1369:6723..12098- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1369.2271.1 ID=mRNA_H-paniculata_contig1369.2271.1|Name=mRNA_H-paniculata_contig1369.2271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5376bp|location=Sequence derived from alignment at H-paniculata_contig1369:6723..12098- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCATCTGTTTTGCATGACAGATAGGCAGGAGTGTGTCGTCTCCTGACAA
CAAGCACCACGCCTTCCCACCTTCTATAGGTGAGCAGTGCAAGCTACTGC
TTCGCCGTATAAATCTAGACAGTAGTATCGTCAGTGCTATTGACGTCGAC
ACACCGAAGCACGGCAGTACAGGACAGTACAGTACAGTATCATACATGAG
AGCCAGCAGGGAACACCAGAGTACCACCACAGGCAGTATAGTCAGCAGTA
CCAGCGCAGTCTGAACACATCACAAGATAGTACAGTGCGACGGTTGCATA
TTTGGATTTGACGTCCTTGCATCGTGGCAAGTATAAGCACAAAAATCGTG
AGGGGCGAGCTGCTGAGATAGCATAACGCATTATACAAACAGTAGTATTT
GGGGGGGAGCATCTGACTAATGAAATGAATTCATATTTCCGTTTGTTGCA
CGTCTGAACCCCGTAGGTTTGATATGTCCATATCATCCTGTTTTTCTTTT
TGGCTTGATTTTAGTGTAGACCGATATATTTCAACATTTTACTCGCCTAT
GGGGTTCAGGCCTGCAGATAGCGACACCACTTAAGAAATTGGGAGATAAG
AAATTTAGGCTGGATTTTTTTTAATCAAGCAATTACAGCTTAAGAAATTG
TGCTCACTTCGAGGTGAAAATAAGAATTAGAAATCGGTTACGTAATGTCG
ACCTTGAAGCTTGAGTGAATGATTGTTCTGGCTGCGGCACAGTGCTACTG
TAGACCGAACAGTAGGAGAGTCGTTTGAAGAGGGGTAACATAGATGTCAT
TCGATGCCCGCCGTCCTATTGCGTATCGTTTTACGAAAATGTGAATCATC
ACGAACAGAAGATGTTGTGGCGTGTGGTAGATGATTGAAGATAAGTCAAA
TCATCTTGCACAGCCATCCATCCCAGGCTAAATTAAGAAATTGGTCTTGA
GCATAGCCGCACATCCTTTCGCACATAAAGAAAATGGCTCATAAGCAATT
GTGCTCGACTCGGGGAGAACATAAGCCGCGAGGCTCATCCCAAATAAGAG
TTCCTTAACTGGTGCCGCCATCTGTAGTTTGTTTGTTCCCTAAAGTTGGT
TGCTCCTGTGTGCAGTGCGGTTTTTTAGTGAAGTGATTGGACGGGTACCG
TAGCTGTTCCTTCCGTCCTCGCGGGATACGACAGATGTGCTACTAGTCCT
GGCAGGTGCTTACAGTTGTCGTTAACTGTATCAAAACTCACGTCCGTCCC
GAAAACCGAATTCCTCAACACCCTTCACAAACACATTCAGACATCGGACG
GATCAATCTCTGTACGATCCATGGTTTACGGATGACTTGCGGCGAACGTG
TACTACTGATCCGTAGTGTAGGGATGAACGGATCACCGGTGCGAAACATG
TGTGAATGATCCGCACGGGTACCGATCACCAATGGAAAACATATACTAAC
GATCTGTCCGCTACGGATCAGTGTCGCAAACCTTCAATAACAGTGCGTAG
CGTACAATTCCATCCTGTGAAAAACGAAGTTGCTGCCTCATGGTTATTCA
ATGTCCGGAACAGCAATCACAATGCCACGAACGGTGACATTTTTCCCAAA
TCGTGACATATATATGCCCAACGGTAGCTAAACTTCGGCGAAGAGGAACT
TTTTTCCCTGAAAGACCACTTATTGCACCAACAGTCCGTACACGATGACG
GTCCTTAGAGTACGGATCAGTTGCATGGATCATGGGCAAACGATCCGCTC
TCTATGGATCAGTTGTACGGATCATGGGTAATCGACCCGTAGGGTATGGA
CCAGTTGTAAGGGACATGGGCAAACGATCTGGTACGAAGTATGTAGGGAT
CAAACATGGTGTACGGATAATTGGTGGCAAACATGTACCGTCGATCCGTA
CGGTACGGATCACGAGTGCGGAAACATGTACCGATCGTTCCACAATGTAC
GGCTCGCTTGTGGGAAACATATGCGGATAAAACACGATGTACGGATTAGA
CGATCTACCCGCAAAATGGCAAATATGATCCTTGTACGATCCGATCCGTC
CGACGTGCGAACGCATTCCTACGGAAAACTAGTGCATTATTATTGCCACC
TATCCATCGCCTCAATCCAGCCCAGCCAGTACCAACTGTCTGTAAGAAAA
AGCGCGATTCAGCGTGATTCAACGCCATTTTGTCGTTATTCCCCACGAGC
AAAGGCGCGGTGCGCACATGCGTTGGCTATGAAAAATCGAAGAGTGTTCG
CCTCCACAGGGCTCTTCTCAGAGTGGCTGTTACTGCTACGTTCAATCCTT
CACACGATATTGTGCCCAAACATTGCAGAATTTCCGTATTCTTCGAGTAC
GGCCACAATAGCGGTATACAGCGCGAAAAATGTTAGTTGGTATTCAGCTT
CAGGGAGTGTGCTATTCCGCGTGACCTAGAGATCGATAAAAGTTTCAGAA
TGAGCTCGTGTATTTGATGTGTCCTGGACCACCCACGACTGCTAATAATA
CTCGTAAGTCGAAGGGGCAGGGGTGGGTACTTCATTCTCTGTGTCCGTTC
ATTCTGAAACTCATGTGGATACTGTCATTTTTTTGTGAAAATTATTTGCA
AGTATTCGTACTTGACCGAGGGGTGAAATGTTTAGAAGTGAACGAAAAAT
CATAGCACTCGGGTGTATTAGTCATATAGTATCAGCGGTCTGTTAATTTC
AGAGCCCCTTGTACGGTATACCTCACAATACGTGACTGGTCAACAAGGGC
ATTACTGTTTTGTAGGATGTCCTGAATTTCATTACCTCGGTCTCTCGCTC
ATTCTTATAAGCTTTCCACTTCTTTGTCAGAGTGATGTAGTTGCTGTACA
TGCACGCTGGTGTGTTGCCGAGTTTCGCGATAGTCGGATTGGCCGATCTT
GTGTGGGGAGAAATATACCAGAACACAGTTTGCAAAAAAGAACGAAATCG
GGCACAAAGTGTCACAATTGGGACCTATTTGGCACCGCGAGGACGCATGA
ACGCTGACGAAATATAACCAACGCTGCTCCCCTAACCTAACCAATGCTGC
TCCCCACTAGCTGTCTGATCGATTGCGACTGCTGTATTGAAGCCATCGCC
CTCTACCTCGTCTATCATCTCCGTCACTGTGTTCGTATTGTCGATTTGTT
CTTCATGCCTCAGATCAAAGCCTCGCGTTATCGCTCGGCGTCATGGTCCT
TCGTTGCGCAAGTATTGCTGCAGGGGCCTCGATAAATATTGCGAAGCGAC
CATGGTGTACAGCGAGCGGTGCTGTTGTCGCTCGTCTATCGAAAGTCGGT
CTCTCCTCCACTGCCAAGGAAACAAGTAGGCCTTCTATTAACGACAGACA
GCGCCGACGAGGCATTACGGGTGGCCATGGGGGCGATCGGAGTGGATATA
GACACGTGACACGGTCAGGCGGCGAGGTGGGTCAGGCAGCAGGACCATCT
GGCGATATTATGACTATTCGAAAGTTTTACATGGATCGATTAAAGCAGGC
CCGGCTTCAACGAGATTGGAATATAGCGAAGCAAATATTCGAGGAAGCTC
TCGCTCGTGACGATGCGCGGTTGGTTATGAATTCGTATGTCTACAACTCT
GTCATCGATGCTGCTGCCAAATGTGGCAAGTGGAAAGCGGCGGTTGGAAT
GTTAAAATTCATGCGAATCAAGGGGGTGAATCCTGATGTCGTGAGCTATA
ACTCGGCGGTGAAGGCGTGCGGAGACGGTGGACAGTGGGAGAAGGCTCTG
TCGCTTTTGAAGGAAATGCAGACTGAGGGTATCGCCCCAAATGATAGAAG
CTACACTTCAGCCATCAAGGCGTGCGGATATGGTGGGAAATCGGAGCATG
CATTGTCGCTGCTGAAAGAGATGCAGGTGGCTGGTATCATCCCGGATGCA
ATGTGCTACAACTCGACCATCAACGCATGCGGGGAGGGCGGACAATGGGA
TCGTGCTTTGTTGCTCTTGGAAGAGATGCGGACGGCGGGCGTCGTCCCAG
ATGTGGTAAGCTACAACTCGGCCATCAAGGCTTGTGGGGACGGTGGTCAG
TGGCAGCAGTCTTTGTCACTTTTGAGGGAGATGCGTAGGGAGGGTATTTC
CCCGGATAATAGGAGCTACAACTCTGCCATCACGGCGTGCGGAAACGGTG
ATCAGTGGGAGCAGTCTTTATTGTTGTTGGCGGAGATGCGTGCGGAAGGC
GTTGCCCCGACTGTCGTGGTCTTCACTTCAGTCATCAAGGCCTGCGGGGA
CGGTGGTCAGTGGGAACAGGCCATTTCGCTTCTGAGGGAGATGGAGGCGG
AGGGTATCGCACCTAACCACATAACCTACGACTCGGTCATCAGGGCTTGC
GGGGACGGTGGTCAGTGGAAGCAGTCTTTATCGCTGCTGAAGGAGATGCG
GACGAAGGATATTGTCTTGAATGTTATGAACTATAACTCGGCTATGAAGG
CGTGTCGGGAGAGCGGACGATGGGAGCAGGTGTTGCCACTATTGCGGGAG
ATGCAGGTGGAGGGCATCGCCTCGAACCTGGTGAGCTACACCTCTGCCAT
CGTCGCTTGCGGGGACGGTGGGCGATGGCAGCAGGCCTGGTCTCTTTTGA
AAGAGATGGAGACGGAGGGTATCGTCTCCGACGTGGTGAGCTACAACGCA
GCCATCAAGGCCTGCGGTGACGCTGGGCAGTGGGAACGATCTTTAGCGCT
TTTGAGAGAGATGCAGATGGGGTATGTTACGCCGGATATGGTGAGCTACA
ACTTGGCCATCACTGCTTGCGGGAAGGGTGACGAACCGCGACAGGCTGTC
GCTATTTTAAGAGAGATGAACGGTGAAGGGGTCCCTGCCGCGGATACCCG
AACCTACAACGCTACCATCTTTGCTTTCTGGCGGGGTGCACATTCATCCC
AACACAAAGTTGAACAGACACGTTGACTGTTTCGAAAGAGGCTCCTGTCA
ACTAGAAGCATCCGTTGGAGACGGCAAAAAAACTTTATTTTGGAGTAATT
TGCGGTGAGGGCTAGAGCAATCGAGTAATTGGTTGAAGGTGGTGGCTGCA
CTGTGCAAAATATTTTTGGCTCAAGGGACCGATGCGGTGGGACTACAATA
TACAGTCATGTCGAGAGACACGTACTTGCCGCGCGCATAAAGATTGGCGG
CATTGGGTTCCGTGTGATGCCGCGTTTGACCAGAATAGTAGCTCTTATTC
ACAGCTACCTTGCTACTGCTGCCAAGGTCGATGTAGTAGGGAGACCATTG
CAGCTCCTCGCGATCATCATCGAAGATGGAACACAGCTTGACCCAAGTAA
ACCTGTACGGGGCTCACATCTAAAAAATCTATATTCCGGGATTTGCTTCA
TATCTTACAAATAAATATATGTTTCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1369:6723..12098- >mRNA_H-paniculata_contig1369.2271.1 ID=mRNA_H-paniculata_contig1369.2271.1|Name=mRNA_H-paniculata_contig1369.2271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3468bp|location=Sequence derived from alignment at H-paniculata_contig1369:6723..12098- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCCTTCGTTGCGCAAGTATTGCTGCAGGGGCCTCGATAAATATTGC
GAAGCGACCATGGTGTACAGCGAGCGGTGCTGTTGTCGCTCGTCTATCGA
AAGTCGGTCTCTCCTCCACTGCCAAGGAAACAAGTAGGCCTTCTATTAAC
GACAGACAGCGCCGACGAGGCATTACGGGTGGCCATGGGGGCGATCGGAG
TGGATATAGACACGTGACACGGTCAGGCGGCGAGGTGGGTCAGGCAGCAG
GACCATCTGGCGATATTATGACTATTCGAAAGTTTTACATGGATCGATTA
AAGCAGGCCCGGCTTCAACGAGATTGGAATATAGCGAAGCAAATATTCGA
GGAAGCTCTCGCTCGTGACGATGCGCGGTTGGTTATGAATTCGTATGTCT
ACAACTCTGTCATCGATGCTGCTGCCAAATGTGGCAAGTGGAAAGCGGCG
GTTGGAATGTTAAAATTCATGCGAATCAAGGGGGTGAATCCTGATGTCGT
GAGCTATAACTCGGCGGTGAAGGCGTGCGGAGACGGTGGACAGTGGGAGA
AGGCTCTGTCGCTTTTGAAGGAAATGCAGACTGAGGGTATCGCCCCAAAT
GATAGAAGCTACACTTCAGCCATCAAGGCGTGCGGATATGGTGGGAAATC
GGAGCATGCATTGTCGCTGCTGAAAGAGATGCAGGTGGCTGGTATCATCC
CGGATGCAATGTGCTACAACTCGACCATCAACGCATGCGGGGAGGGCGGA
CAATGGGATCGTGCTTTGTTGCTCTTGGAAGAGATGCGGACGGCGGGCGT
CGTCCCAGATGTGGTAAGCTACAACTCGGCCATCAAGGCTTGTGGGGACG
GTGGTCAGTGGCAGCAGTCTTTGTCACTTTTGAGGGAGATGCGTAGGGAG
GGTATTTCCCCGGATAATAGGAGCTACAACTCTGCCATCACGGCGTGCGG
AAACGGTGATCAGTGGGAGCAGTCTTTATTGTTGTTGGCGGAGATGCGTG
CGGAAGGCGTTGCCCCGACTGTCGTGGTCTTCACTTCAGTCATCAAGGCC
TGCGGGGACGGTGGTCAGTGGGAACAGGCCATTTCGCTTCTGAGGGAGAT
GGAGGCGGAGGGTATCGCACCTAACCACATAACCTACGACTCGGTCATCA
GGGCTTGCGGGGACGGTGGTCAGTGGAAGCAGTCTTTATCGCTGCTGAAG
GAGATGCGGACGAAGGATATTGTCTTGAATGTTATGAACTATAACTCGGC
TATGAAGGCGTGTCGGGAGAGCGGACGATGGGAGCAGGTGTTGCCACTAT
TGCGGGAGATGCAGGTGGAGGGCATCGCCTCGAACCTGGTGAGCTACACC
TCTGCCATCGTCGCTTGCGGGGACGGTGGGCGATGGCAGCAGGCCTGGTC
TCTTTTGAAAGAGATGGAGACGGAGGGTATCGTCTCCGACGTGGTGAGCT
ACAACGCAGCCATCAAGGCCTGCGGTGACGCTGGGCAGTGGGAACGATCT
TTAGCGCTTTTGAGAGAGATGCAGATGGGGTATGTTACGCCGGATATGGT
GAGCTACAACTTGGCCATCACTGCTTGCGGGAAGGGTGACGAACCGCGAC
AGGCTGTCGCTATTTTAAGAGAGATGAACGGTGAAGGGGTCCCTGCCGCG
GATACCCGAACCTACAACGCTACCATCTTTGCTTTCTGGCGGGGTGCACA
TTCATCCCAACACAAAGTTGAACAGACACGTTGAATGGTCCTTCGTTGCG
CAAGTATTGCTGCAGGGGCCTCGATAAATATTGCGAAGCGACCATGGTGT
ACAGCGAGCGGTGCTGTTGTCGCTCGTCTATCGAAAGTCGGTCTCTCCTC
CACTGCCAAGGAAACAAGTAGGCCTTCTATTAACGACAGACAGCGCCGAC
GAGGCATTACGGGTGGCCATGGGGGCGATCGGAGTGGATATAGACACGTG
ACACGGTCAGGCGGCGAGGTGGGTCAGGCAGCAGGACCATCTGGCGATAT
TATGACTATTCGAAAGTTTTACATGGATCGATTAAAGCAGGCCCGGCTTC
AACGAGATTGGAATATAGCGAAGCAAATATTCGAGGAAGCTCTCGCTCGT
GACGATGCGCGGTTGGTTATGAATTCGTATGTCTACAACTCTGTCATCGA
TGCTGCTGCCAAATGTGGCAAGTGGAAAGCGGCGGTTGGAATGTTAAAAT
TCATGCGAATCAAGGGGGTGAATCCTGATGTCGTGAGCTATAACTCGGCG
GTGAAGGCGTGCGGAGACGGTGGACAGTGGGAGAAGGCTCTGTCGCTTTT
GAAGGAAATGCAGACTGAGGGTATCGCCCCAAATGATAGAAGCTACACTT
CAGCCATCAAGGCGTGCGGATATGGTGGGAAATCGGAGCATGCATTGTCG
CTGCTGAAAGAGATGCAGGTGGCTGGTATCATCCCGGATGCAATGTGCTA
CAACTCGACCATCAACGCATGCGGGGAGGGCGGACAATGGGATCGTGCTT
TGTTGCTCTTGGAAGAGATGCGGACGGCGGGCGTCGTCCCAGATGTGGTA
AGCTACAACTCGGCCATCAAGGCTTGTGGGGACGGTGGTCAGTGGCAGCA
GTCTTTGTCACTTTTGAGGGAGATGCGTAGGGAGGGTATTTCCCCGGATA
ATAGGAGCTACAACTCTGCCATCACGGCGTGCGGAAACGGTGATCAGTGG
GAGCAGTCTTTATTGTTGTTGGCGGAGATGCGTGCGGAAGGCGTTGCCCC
GACTGTCGTGGTCTTCACTTCAGTCATCAAGGCCTGCGGGGACGGTGGTC
AGTGGGAACAGGCCATTTCGCTTCTGAGGGAGATGGAGGCGGAGGGTATC
GCACCTAACCACATAACCTACGACTCGGTCATCAGGGCTTGCGGGGACGG
TGGTCAGTGGAAGCAGTCTTTATCGCTGCTGAAGGAGATGCGGACGAAGG
ATATTGTCTTGAATGTTATGAACTATAACTCGGCTATGAAGGCGTGTCGG
GAGAGCGGACGATGGGAGCAGGTGTTGCCACTATTGCGGGAGATGCAGGT
GGAGGGCATCGCCTCGAACCTGGTGAGCTACACCTCTGCCATCGTCGCTT
GCGGGGACGGTGGGCGATGGCAGCAGGCCTGGTCTCTTTTGAAAGAGATG
GAGACGGAGGGTATCGTCTCCGACGTGGTGAGCTACAACGCAGCCATCAA
GGCCTGCGGTGACGCTGGGCAGTGGGAACGATCTTTAGCGCTTTTGAGAG
AGATGCAGATGGGGTATGTTACGCCGGATATGGTGAGCTACAACTTGGCC
ATCACTGCTTGCGGGAAGGGTGACGAACCGCGACAGGCTGTCGCTATTTT
AAGAGAGATGAACGGTGAAGGGGTCCCTGCCGCGGATACCCGAACCTACA
ACGCTACCATCTTTGCTTTCTGGCGGGGTGCACATTCATCCCAACACAAA
GTTGAACAGACACGTTGA back to top
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