mRNA_H-paniculata_contig13680.2266.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13680.2266.1
Unique NamemRNA_H-paniculata_contig13680.2266.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: D7G7I6_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7I6_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 2.510e-54
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 3 
Query:  642 QKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 962
            Q G+VTVY+KETCPYCKKALALLE DY L V+RVNVLEG+DSEKKIKQMKTFSG NTVPQ+FFNS H+GGNDDVQKLH+DGKL E+V  VRAE  GMMKDSWYHPWY
Sbjct:   65 QAGLVTVYHKETCPYCKKALALLENDYSLQVTRVNVLEGEDSEKKIKQMKTFSGANTVPQVFFNSEHLGGNDDVQKLHEDGKLEELVKKVRAEAPGMMKDSWYHPWY 171
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A835ZFR3_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR3_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.940e-45
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 3 
Query:  525 AAGNRIVLPGTKVVRSVGMIR---NRNSIALD-MSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 962
            AA + +V  G   VR +       NR   AL  MS   AV  EQ+G+VTVY+KETCPYC K L LLE +Y L+V+RVNVLEGDDS+KKIKQM+TFSG RNTVPQ+FFNS H+GGNDDVQ LH +GKL+E+V T+ ++ A + K  WYHPWY
Sbjct:   22 AATSAVVQHGGLAVRPLSYASSGGNRAGAALTTMSTGTAV--EQRGLVTVYHKETCPYCVKVLHLLENEYNLSVNRVNVLEGDDSDKKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQSLHSEGKLAELVETILSQDASL-KAGWYHPWY 169
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A836CJB3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.580e-40
Identity = 75/118 (63.56%), Postives = 95/118 (80.51%), Query Frame = 3 
Query:  612 MSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 962
            MSA A    EQ G+VTVY+KETCP+CKK L LLEGDY L V++V+VL G+DS+K +KQM+TFSG RNTVPQ+FFNS H+GGNDDVQ LH +G+L ++V ++ +EPA  +K  WYHPWY
Sbjct:    1 MSAVATA-TEQLGLVTVYHKETCPHCKKVLELLEGDYGLEVTKVDVL-GEDSDKVLKQMRTFSGGRNTVPQVFFNSHHLGGNDDVQALHAEGELEKLVESILSEPA-TLKKGWYHPWY 115
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A6S9FTA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FTA2_HETAK)

HSP 1 Score: 141 bits (355), Expect = 2.280e-35
Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = 3 
Query:  609 DMSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQ--MKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 962
            ++ A   +  +Q GIVT+Y K TCP+CK+A ALLEG+Y LN++ V+VLEG++ E+K KQ  MK FS R TVPQIFFNS H+GGNDDVQ LH++G L+ +VA + AE    + + WYHP Y
Sbjct:   40 NLGARGMMMADQAGIVTMYIKSTCPFCKEAKALLEGEYGLNLTVVDVLEGEEGEQKAKQRQMKQFSFRKTVPQIFFNSKHLGGNDDVQTLHREGALAALVAAMNAEGTPRLDEGWYHPHY 159
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A7S1XU45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU45_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.340e-30
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 3 
Query:  639 EQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSE--KKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 962
            EQ G VT Y ++ CP+C KA  LLE  Y   ++ VN+ EGD+ E  KKI+ M T+SG R TVPQIFFNS HIGGNDDVQ LH DGKL  M+  VR+ PA  M+D WYHP Y
Sbjct:   38 EQAGRVTFYMRDGCPFCAKAKELLEDTYDAELTLVNIWEGDEDEQKKKIRSMTTYSGGRQTVPQIFFNSEHIGGNDDVQGLHADGKLQAMLDEVRSTPA-TMRDGWYHPHY 147
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A7S1U9K7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9K7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 4.470e-30
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  642 QKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSE--KKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 962
            Q G VT Y ++ CP+C KA  LLE  Y   ++ VN+ EGD+ E  KKI+ M T+SG R TVPQIFFNS HIGGNDDVQ LH DGKL  M+  VR+ PA  M+D WYHP Y
Sbjct:   27 QAGRVTFYMRDGCPFCAKAKELLEDTYDAELTLVNIWEGDEDEQKKKIRSMTTYSGGRQTVPQIFFNSEHIGGNDDVQGLHADGKLQAMLDEVRSTPA-TMRDGWYHPHY 135
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: UPI00055EA9F4 (glutaredoxin 3 n=1 Tax=Methylocapsa aurea TaxID=663610 RepID=UPI00055EA9F4)

HSP 1 Score: 80.1 bits (196), Expect = 1.040e-14
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 3 
Query:  654 VTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATV 911
            +T+Y   TCPYC++A  LL    K N+    +    D E +++ M+  +GR TVPQIFF+ LH+GG DD+ +LH DGKL  ++A +
Sbjct:    4 ITIYTTATCPYCRRAKELLR---KKNLDFTEIPVDGDGEARMRMMERANGRMTVPQIFFDDLHVGGCDDLHELHYDGKLDLLLADL 86
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A4S8KT64_DENBC (Glutaredoxin n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KT64_DENBC)

HSP 1 Score: 77.0 bits (188), Expect = 1.800e-13
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 3 
Query:  612 MSAEAAVDVE-QKGIVTVYYKETCPYCKKALALLE---GDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVA 905
            M+ +  VD       +TV+ K  CPYCK A  LL+   GD K  V  ++  E  D  +   Q KT  G+ TVP IF N  H+GGND VQ  HK+GKL E++A
Sbjct:    1 MAVKDVVDTTIDSNTITVFSKSWCPYCKAAKKLLQESYGDKKTEVVELDEREDGDEIQSYLQEKT--GQRTVPNIFVNKQHVGGNDAVQAAHKNGKLKELLA 100
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: UPI000F02BCA2 (glutaredoxin 3 n=1 Tax=Brevundimonas lutea TaxID=2293980 RepID=UPI000F02BCA2)

HSP 1 Score: 75.5 bits (184), Expect = 4.010e-13
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3 
Query:  654 VTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVA 905
            V +Y K  CPYC +A+ALL+      V   N++  +D EKK + ++  +GR T PQIF +  HIGG+DD+Q L + GKL  ++A
Sbjct:    4 VVLYTKPGCPYCIRAMALLDSK---GVEYENIVASNDPEKKAEMVQRANGRATFPQIFIDGRHIGGSDDLQALDRQGKLDPLLA 84
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BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A0S7ESE5_9TELE (GLRX1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7ESE5_9TELE)

HSP 1 Score: 74.7 bits (182), Expect = 1.130e-12
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 3 
Query:  654 VTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEP 923
            VTVY  + CP+C +A A L     L V    V  G  SE ++K +K  +GR+TVPQIFFN +H+GGNDD+QKL  + +L  +V  V+ EP
Sbjct:    2 VTVYSIQGCPHCVQAKATLRS---LGVPVCEVDVGLHSELRVK-LKELTGRSTVPQIFFNGIHVGGNDDLQKLATE-ELQRLVTLVKEEP 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7I6_ECTSI2.510e-5482.24Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZFR3_9STRA2.940e-4559.60Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CJB3_9STRA1.580e-4063.56Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A6S9FTA2_HETAK2.280e-3555.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XU45_9STRA1.340e-3058.56Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U9K7_9STRA4.470e-3058.18Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
UPI00055EA9F41.040e-1443.02glutaredoxin 3 n=1 Tax=Methylocapsa aurea TaxID=66... [more]
A0A4S8KT64_DENBC1.800e-1343.14Glutaredoxin n=1 Tax=Dendrothele bispora (strain C... [more]
UPI000F02BCA24.010e-1342.86glutaredoxin 3 n=1 Tax=Brevundimonas lutea TaxID=2... [more]
A0A0S7ESE5_9TELE1.130e-1246.67GLRX1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13680contigH-paniculata_contig13680:1230..6080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score79.7
Seed ortholog evalue1.8e-12
Seed eggNOG ortholog663610.JQKO01000006_gene2630
Preferred namegrxC
KEGG koko:K03676
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681
EggNOG free text desc.Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
EggNOG OGs1N72P@1224,2UFM1@28211,3NBHN@45404,COG0695@1,COG0695@2
Ec32 ortholog descriptionGlutaredoxin
Ec32 orthologEc-02_000430.1
COG Functional cat.O
Best tax levelBeijerinckiaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Exons3
Model size2121
Cds size657
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13680.2266.1prot_H-paniculata_contig13680.2266.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13680 1538..4924 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929085.9306836-UTR-H-paniculata_contig13680:1229..15371622929085.9306836-UTR-H-paniculata_contig13680:1229..1537Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13680 1230..1537 +
1691480725.7421317-UTR-H-paniculata_contig13680:1229..15371691480725.7421317-UTR-H-paniculata_contig13680:1229..1537Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13680 1230..1537 +
1622929086.059076-UTR-H-paniculata_contig13680:4924..60801622929086.059076-UTR-H-paniculata_contig13680:4924..6080Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13680 4925..6080 +
1691480725.7864537-UTR-H-paniculata_contig13680:4924..60801691480725.7864537-UTR-H-paniculata_contig13680:4924..6080Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13680 4925..6080 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929085.9487574-CDS-H-paniculata_contig13680:1537..19241622929085.9487574-CDS-H-paniculata_contig13680:1537..1924Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13680 1538..1924 +
1691480725.7570226-CDS-H-paniculata_contig13680:1537..19241691480725.7570226-CDS-H-paniculata_contig13680:1537..1924Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13680 1538..1924 +
1622929085.9681706-CDS-H-paniculata_contig13680:3232..33581622929085.9681706-CDS-H-paniculata_contig13680:3232..3358Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13680 3233..3358 +
1691480725.7667172-CDS-H-paniculata_contig13680:3232..33581691480725.7667172-CDS-H-paniculata_contig13680:3232..3358Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13680 3233..3358 +
1622929085.9907963-CDS-H-paniculata_contig13680:4780..49241622929085.9907963-CDS-H-paniculata_contig13680:4780..4924Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13680 4781..4924 +
1691480725.7766476-CDS-H-paniculata_contig13680:4780..49241691480725.7766476-CDS-H-paniculata_contig13680:4780..4924Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13680 4781..4924 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13680.2266.1

>prot_H-paniculata_contig13680.2266.1 ID=prot_H-paniculata_contig13680.2266.1|Name=mRNA_H-paniculata_contig13680.2266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MIKTGNNSQSQSPPRRLRRSRAMVSSHISYAFSTVLLALLASLPSSNAFL
AASPATATRALCRSSIRQTGLTAAGNRIVLPGTKVVRSVGMIRNRNSIAL
DMSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEG
DDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVAT
VRAEPAGMMKDSWYHPWY*
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mRNA from alignment at H-paniculata_contig13680:1230..6080+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13680.2266.1 ID=mRNA_H-paniculata_contig13680.2266.1|Name=mRNA_H-paniculata_contig13680.2266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4851bp|location=Sequence derived from alignment at H-paniculata_contig13680:1230..6080+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCCCCCAATAGCCCCAAAGCAAGATGCATAACGCCTCGTTTATTTGAG
AAGCGATTTGCCATCGCCCCGCATTAACCCCGAATATAGCTTAGTCCAAC
TGGTTAACGCTTAGGTGTACGCTCTGCTCTTACGTTCCGTTCCCCTACAC
TACCCGATCTCCCCTACACTACACGAGCACTGAAGCACGAAGATCACCTA
ATATCTTCCCGGCAATAGTAGCAGCGGTTGCAGTAGCAGCACCGTGTCAA
CCAGACCGAGAAGCAACGTTCAACTTTCTGACAACACATCTACGTTTTCA
CACAGATCATGATCAAGACTGGCAACAACTCACAATCACAATCCCCACCC
CGGCGCCTAAGGCGCAGCCGTGCCATGGTCAGCAGCCACATCAGCTATGC
CTTCTCTACAGTTCTGTTAGCACTGTTGGCCTCATTGCCAAGCTCCAACG
CCTTTTTGGCCGCCAGCCCAGCGACTGCTACGAGAGCACTGTGCAGGTCA
TCTATTCGGCAGACGGGATTGACAGCAGCTGGGAACCGTATCGTTCTGCC
AGGTACCAAGGTCGTGCGGAGTGTAGGGATGATCAGGAACCGCAACTCGA
TTGCATTGGACATGTCGGCGGAAGCGGCGGTAGACGTGGAACAGAAGGGA
ATCGTAACGGTGTACTACAAGGAAACGTGCCCTTACTGCAAGAAGGTGAG
CCCCCGCACTTCTCTCCTGAAACATCAAGTCATATGACATGATGTGTGTC
ATGTATGCAGTGCAGCGCGTGCTGCACTGCACGGTTGTGTGTAACAGGCG
GTCTTTGACATCATGCACTATGGGACAGTAGACACTTACGATCTTTTACT
GTCATATATACCGTCAGTACACACTTTTTGGTGAAAAGCTCGTCTTGGCG
ACGCCTATTCTGAACAGCACGCCAGTCGACTAGTCTAGCAGCCGGTTATT
TCGTTTGTTTTGGCTCCGAAGGTCCCTCGCGGAGGTCTGACACCACGCGA
AATGCTGCCACATGTACGCCGACACACGACGCCGACCATAAGACAACGAA
ACTTACTTCCGGAATATAGAATGCAGCGCCAGTGCACGGCCGGAAAGTAG
AGCATGTCGATACATTCTCTCTCCAAAATCCCTTCTCATGGCACGGTGTT
CCTATTCTCTCCGCGAAGTACATTTTCTCGGAACAGTTTCTAAAGTGGAC
TCATCGGCTGTGATTTCACTCCCAATGTTGTTTGTAACATACGAGACTAA
CTTTAGGTCGTCAAATTTGTTTGTCTCATAGTAAACAAATATCCTCGTTT
CCAGATTCGCGGGTCTAATGTCTTTGAATACTATTGCGAACGATGCCTAT
TCAAGAGTACGGGCTTCTGACGTCATCGTTTATTTGTAATTGGGGTGAGG
AGGCCTCGCTGGAAGCGGGGCAGGAGCTAATAAAAACAATAGGTATTTGT
GTGTGCTGGATGCTGAATGACCGCAGGCGGCATACTTACTTCCGCTGGAT
TAGTGACTGCAGGATGTGGTGCAAAAACACCGATACATCATTCTGAACGC
CGATCGATACATAGCTCCATCAATTATACCTGAAAATGATTGTACTGAAT
TTGCGACGTTGACTATTTCCTTCAAAGCCTTCATGGGGTTTTTTTCCCGG
TTTCGTAATGCTGTGAGTACACGCCGCGAGACAACTGGTATTACGAAGGA
ACATAATAATCAGGAGCATTTTTTTTGGTTCTTCGGAAACTGAATTTTGT
TGTTCCCCGTTGATCTACAGATTTTCGCTTCTAGCTGAAAACAAAAACAC
ACTCTAAAAACACTTGACAGGCATGCAGCAACCGATTGGTGCATATCGTA
TTGTATGAGTTACACCTCAATATGTCAATTTTCTAATTTGCTCCTGATTA
ATATGTTCCTCCGTAATAGTGGCCTGTAACATCATCCTAAGGACGTTGTG
CTAACTCTTCCTTTGCTTGCCTTATCGCGGAAACACTGGTATATACACAA
AAGGCTTTGGCACTTCTGGAAGGTGATTATAAGTTGAACGTCTCCAGGGT
AAACGTTCTGGAGGGAGATGACAGTGAGAAGAAGATCAAGCAGATGAAGA
CCTTCAGCGGTCGCAACACTGTGCCTCAGGTCCGTCCGTGGTAACTCCTT
CCGTTTAGTTTGTGAGCGTGATCAGATATTATGTGCGGAAAGGCTAATCG
ATCTTTGAATTTTCTTCCTACAAAACCTGAAGTAGTAGATTGTGATGTGC
TGGTGGAAATTCCTTGTTGGGCTGAATTGAAAGAGGTCTCAGGGGGAAAA
GGCTGCTGCTGCTGCTGCTGCTACTGCTATTCGTGCATGAAAAGGCGTCC
TGAAGCTCATCCATTACCATACCCTCAAGTTGTTGATGACCGTCGTTTCA
GATCAATTTTTCAATTCCGTGCTTAGGTAGCTTTTCGGTCGCTAACGGAG
CCGCATTTCTGCTGATGTCTCTATCAGAGCAATCGTTTTCTCCACTTTAA
TCGCTCTCGCTCGCAGCTTGATTGCTTCCGGCCGTGCGTGCGCGCCGTTC
CCTGTGACGGGGACCCGTTATGAGGACCTTGGGCGCGGGGAACAAAACCC
GCTCTTCCGTTTCTATCACTATTAGCGTCGGCTTTTCCGCACGCCTCCTC
TGTGCCTGCCGTAGCTTTTTCTGGGACACTCGAAATAACAGACGAATCGT
TTTGTGGAGATATTTTGTATTGCGAGGACGCTGGCCGCTGTCCGAGTGGC
ATTTCTCGGGTTCGATTACACTCGCTCAGAGCCTTTAGTGGCGACGGACT
ATGTTGTACTGTAGTCCTGACCGCCTGCTTTGCTGTATCATATTAACCTG
TCTCTTGCGTTGTTGTCTTCAATAGCTATCTGTCATCGCAGATTTTCCCA
ACTATCGTGCACCAGGCTGTGGGTACTTTGCTGGTTGCATGCTCGTTGTC
TGGTGTGGAATTCGCATATAAATTCTCTGTGACATCGTGCCTCAATTTCG
TGAGGCCGGACATAATAATCAGTATTGTGCAGCGTCAGCGGCAGAATCCT
TGCCGTTGCTTCACTGTAAATCGTGTTGTGTTGTAACAGAGTTATGGATA
CACAGTTGTCCAGTGCACCGTCGGAGCAGGATCTTCGCTGCTCATTTTGA
GAGCATGTGTTCGTTGTTAAGGGCATCTGCGACAAGTAATGGTAGATACA
AACAGTAGAGTTTTCTCACCCTGCAAGATTGAATCGGCCATTGTTCGTTG
CTCTTGGATATCGCTCAGTAAGCGTCGCCGCATCAGCGGCAGAACCTTGA
ACAGATAATAACTGCTGTCGACAATTGGGATAGTTGTCCGTGTTTTGATG
AGAAAGAACAAATCCTTTCTGATATACCTCCTCGTCTCGCCCAACAAAAC
GTTAGCGTCTTGTTAGCGGGCCGCAACCGCACGGTATGGTACTGCTGCCT
CCTGGCCCGCGTGCTCTTCTTCACGGGTCGTGCGCATAGCCTACGTGCCT
TAATGTTACCCTCGCAGCAGCTCACCTTCAAATCCCCTGCCCGACCTGCA
GATTTTTTTCAACTCCCTGCACATTGGTGGTAATGACGACGTGCAAAAAC
TGCACAAGGATGGAAAGCTCTCCGAGATGGTCGCCACAGTGCGGGCGGAG
CCGGCGGGCATGATGAAGGACTCGTGGTACCACCCTTGGTACTAGAGCGC
GTGCTACTGTAGTGGTCATCATACCAAATTTGTTCCAAGAACTTCAAAAT
AGGACGAGTTCATCATTTTTCCAACATATTGTTCGGTCGACCTCGTGCCA
GTAGTCGACATCTAACGTTTCAGAAACTTGAAGATATATTCGGCGTTTGT
TTTAGGGAGGCATCGTGGATTGTGGATATGATTTCGGGAACCATTCCAAC
TTAATAGATACGTCGAACATTTCCCCAAATATTTGAGAGAAATGCATCAG
TGCAGTTCATCAGCACACGGATCTAAAAATAGACGGGGGGGGAAAAGCCG
TCATCGACTTTCGAATGACATGTTGGAACTAGTGAACCTGGGTATTATAC
CTTGCTTTTGAAAACGTTCCAGCGCGGAATGGAAAGCCCCACCACCGGAA
GTGTTTGAGAAGTTGATTCTATGCATCGCGCTACAAACGGCACCAATCGA
TCGAAGGCTTTTGTCAAGTGAGACGACCGTATGTGTCCAAGTCATGGGAT
ATCTGATCTTTTTTGTCCTCTTCAAGAGTCGTAATCAGTATGTTGCTCAT
CATGATGTATGTGTCCTGTGCTTATTAATGTAGAGCAGAAATGACAGATG
TAGGGAGACGTCTACTTTCTTGTTGCATTGTCATGTGGTATGTACTCTTG
AAAAACAGTGGAGATGCAGCGGTAACGTGGGTGGTTCCAAGAAGCTGTTA
CTGGGAAATTGTCTGTTGGTTTTTCATGTTGCAGTCTCTTGTGTGTTCCG
GTTTCTAATGGATTTCGTTCGTGAAGGCACGGCCTGTCCCATAGTATCTG
CTGCTACATTAGCTATTGTACAAAAGGCTCCGCATCAAGGGCGCCTAACC
TTGTGGCGTTCTTCGAGAGCAAAGCACGTCATGTGCGTCAGCTAAATGTG
ATTTGTGTATTGTGTCTTATAAAAAAAATCACCGAATACCGTGGACGATT
TCCAAACGCGCACAACAAGAGTATAGTTGAGAATGTTGTATTTTCGATAG
TACCGCCACAAGGAGTTTTCCTGTCGGGGGGGAAATGGCGGCGGTATGTT
TTCTGAAGAGTCCAAATGACTACCATGTTATGCCCGAATAACCGTGCGCA
GTAATTCAACACCAGAAAGTGAATTTAGCTTACCGTGAATTTTTTCCGCA
G
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Coding sequence (CDS) from alignment at H-paniculata_contig13680:1230..6080+

>mRNA_H-paniculata_contig13680.2266.1 ID=mRNA_H-paniculata_contig13680.2266.1|Name=mRNA_H-paniculata_contig13680.2266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig13680:1230..6080+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCAAGACTGGCAACAACTCACAATCACAATCCCCACCCCGGCGCCT
AAGGCGCAGCCGTGCCATGGTCAGCAGCCACATCAGCTATGCCTTCTCTA
CAGTTCTGTTAGCACTGTTGGCCTCATTGCCAAGCTCCAACGCCTTTTTG
GCCGCCAGCCCAGCGACTGCTACGAGAGCACTGTGCAGGTCATCTATTCG
GCAGACGGGATTGACAGCAGCTGGGAACCGTATCGTTCTGCCAGGTACCA
AGGTCGTGCGGAGTGTAGGGATGATCAGGAACCGCAACTCGATTGCATTG
GACATGTCGGCGGAAGCGGCGGTAGACGTGGAACAGAAGGGAATCGTAAC
GGTGTACTACAAGGAAACGTGCCCTTACTGCAAGAAGATGATCAAGACTG
GCAACAACTCACAATCACAATCCCCACCCCGGCGCCTAAGGCGCAGCCGT
GCCATGGTCAGCAGCCACATCAGCTATGCCTTCTCTACAGTTCTGTTAGC
ACTGTTGGCCTCATTGCCAAGCTCCAACGCCTTTTTGGCCGCCAGCCCAG
CGACTGCTACGAGAGCACTGTGCAGGTCATCTATTCGGCAGACGGGATTG
ACAGCAGCTGGGAACCGTATCGTTCTGCCAGGTACCAAGGTCGTGCGGAG
TGTAGGGATGATCAGGAACCGCAACTCGATTGCATTGGACATGTCGGCGG
AAGCGGCGGTAGACGTGGAACAGAAGGGAATCGTAACGGTGTACTACAAG
GAAACGTGCCCTTACTGCAAGAAGGCTTTGGCACTTCTGGAAGGTGATTA
TAAGTTGAACGTCTCCAGGGTAAACGTTCTGGAGGGAGATGACAGTGAGA
AGAAGATCAAGCAGATGAAGACCTTCAGCGGTCGCAACACTGTGCCTCAG
GCTTTGGCACTTCTGGAAGGTGATTATAAGTTGAACGTCTCCAGGGTAAA
CGTTCTGGAGGGAGATGACAGTGAGAAGAAGATCAAGCAGATGAAGACCT
TCAGCGGTCGCAACACTGTGCCTCAGATTTTTTTCAACTCCCTGCACATT
GGTGGTAATGACGACGTGCAAAAACTGCACAAGGATGGAAAGCTCTCCGA
GATGGTCGCCACAGTGCGGGCGGAGCCGGCGGGCATGATGAAGGACTCGT
GGTACCACCCTTGGTACTAGATTTTTTTCAACTCCCTGCACATTGGTGGT
AATGACGACGTGCAAAAACTGCACAAGGATGGAAAGCTCTCCGAGATGGT
CGCCACAGTGCGGGCGGAGCCGGCGGGCATGATGAAGGACTCGTGGTACC
ACCCTTGGTACTAG
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