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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-01_004260.2 |
| Exons | 4 |
| Model size | 1205 |
| Cds size | 1203 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13673.2261.1 >prot_H-paniculata_contig13673.2261.1 ID=prot_H-paniculata_contig13673.2261.1|Name=mRNA_H-paniculata_contig13673.2261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp
TKTKRLTSSSKAAAAAGRSGKGKMPAAEPPLPPPPPPRHGGYVDSADFNV
GTYTAKRAKTRARPVKPSKRRTTTPTKVAPCVACENDQHVLQHNATSQAK
TPSSRTTTQKSTSVAAGVGVPKIPGVPFVGSGKAPESYNVVSAVSKALRT
ARKGRPRESLDVLYADVGAAVLDSASDVPFMFQQRQPSSPSPSLPIPIRR
GKKKKTATGAAVGKDRRGGNHGRVRVTGDGRAVLNVEMPDVGSLNLDAEP
LLPRQTHHGEHLRYAAKPGVGHWVEASSEGDGGEARGASLPEYWNQRWDE
AEGRDRRGRARRGEGSRRGRRKVPPAVAGSTNGRVAAMAAAADGGKSRGF
SGRGENLDDDDDDDEDGVEDGAWGRGATHGGNDRQNYLGSGSRKGPRRNE
E back to topmRNA from alignment at H-paniculata_contig13673:1510..3780+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13673.2261.1 ID=mRNA_H-paniculata_contig13673.2261.1|Name=mRNA_H-paniculata_contig13673.2261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2271bp|location=Sequence derived from alignment at H-paniculata_contig13673:1510..3780+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACGAAGACTAAGCGCCTTACTAGCAGCTCTAAGGCAGCGGCGGCGGCGGG
GCGAAGCGGCAAAGGAAAGATGCCAGCCGCCGAACCGCCGCTACCACCGC
CGCCGCCTCCCCGCCACGGCGGTTACGTGGATAGCGCAGACTTCAACGTG
GGCACTTATACGGCAAAGAGGGCCAAAACTCGAGCTCGACCAGGTGCGCG
TACGTGTGTGCAATGCAGGCAGAGGGGCGATCTATATTATGTATCCCACC
ATGCATTACTATATTCTGGATGGGACTGAGCGGCAAGGGTCTGTAGAATA
TTCAACACCCAAGGCTAAGGATTATGACTTCATTACCCACCGGCCCCCGA
TGCTTGGTTGAAATTTGATCTATATTTTCAGTTACCATCAACACATGTCT
GAATACACGTCGTTACGCCCTCACCGCCCTTCAGTGAAACCAAGCAAGCG
GAGGACGACGACACCTACGAAAGTGGCTCCCTGCGTTGCCTGTGAAAACG
ATCAACACGTACTGCAGCACAACGCCACGTCTCAAGCGAAAACGCCATCG
TCCAGAACAACGACACAAAAGTCTACTTCTGTGGCGGCGGGGGTGGGAGT
ACCGAAAATACCGGGAGTACCGTTCGTTGGGTCTGGCAAAGCGCCGGAAT
CGTACAACGTTGTGTCTGCCGTGAGCAAAGCGTTGAGGACGGCGCGGAAA
GGACGGCCAAGAGAGGTGCGTGTTTATGTGTTTGTGTGTCTATTGTGGAC
TGGTGTTGGATAGTTGAAACTGTACTTGTCGGTTTTCGTGGTTTTGCAAT
AGGATGTACGCCCGACCCGACGCAGTAGTGTCGCAGAGCATGAAGGGTGT
GTGTGTCTTAACAAAAATAGTTTGATGCAAGGCCATGCGCTCAATTTTGT
AGATTACCCTGCTGGATGATACATGCGGTAGCGCCACGACCGTAGGAGCG
TATTCATTCGCCGCTCGCAGATGTTCATCATGTTTTTTCCCCCTGAGACG
TCTCAACACCTCGAACCTGTTTACTTACAGCGGTACACCTGATAGTGCCA
CTCACATCTAAGACCCTCACTTGCACGTCTGAAAATAGTCACGTGCAGAG
CAGCAAGTCGGTGAAGTGCCTGTACAACAGCTCACCGCAACGTACACCTC
GAGCTGACACAAAAAACAATCGAAACAAATCATGCACTTGCCTGAAGTGG
TTTCTTATAATTGATATCGTCGCTGTGCGCCCTACTGTGCACGCACGTAG
TCCTTGGACGTGCTATACGCCGACGTAGGCGCCGCGGTGCTCGACAGTGC
GAGCGACGTGCCTTTCATGTTTCAACAGCGGCAGCCTTCATCGCCATCGC
CATCCCTGCCAATACCTATACGGCGTGGGAAGAAAAAAAAGACGGCGACG
GGGGCGGCGGTGGGGAAAGATAGACGTGGTGGCAATCATGGGAGGGTGAG
GGTGACAGGAGACGGTCGAGCCGTACTGAACGTGGAAATGCCAGGTGCGC
GTTCGAACAATGCAGCTAAGTCAACGTATTGTAATGCTGCATGAGTTAGA
CGTTCGCTGCTTTTCTGGTGCTATAACTTAACACATCGTGTGCCAATACG
CCTCCAGCGGAGGCTCCATACCTACCACGTTTCTATCGCGACCGATTTCG
CGTTCGCCTCCCTCCAATAAGGCCGTGCATGAGTTTACCTTGTCCACACA
ACAAAATAAAGCGAAGAGCTTTTCGCCCCCGCCGAATTTCATGACCTCCC
GCCGCCACACGCTTACTGTCCCGCCCCCCAAACAGATGTCGGCAGTCTAA
ACCTCGACGCGGAACCATTACTCCCCCGCCAAACTCATCACGGTGAGCAC
TTGCGGTATGCAGCAAAACCTGGCGTCGGCCATTGGGTCGAGGCTTCCAG
CGAAGGAGATGGGGGGGAGGCGAGGGGCGCAAGCCTGCCGGAGTACTGGA
ATCAGCGATGGGATGAAGCGGAAGGTCGAGACCGCAGGGGCAGGGCGAGG
AGGGGTGAGGGATCGCGCAGAGGAAGGAGGAAAGTGCCCCCCGCCGTCGC
CGGAAGCACCAACGGTAGAGTGGCGGCGATGGCGGCGGCGGCCGACGGGG
GTAAGAGTCGAGGGTTCAGCGGTCGGGGAGAGAATTTGGATGATGATGAC
GACGACGATGAGGATGGGGTTGAGGATGGCGCGTGGGGGAGAGGAGCGAC
TCACGGTGGGAACGATCGGCAAAATTATCTTGGGAGCGGTTCTCGGAAGG
GTCCGCGAAGGAATGAGGAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig13673:1510..3780+ >mRNA_H-paniculata_contig13673.2261.1 ID=mRNA_H-paniculata_contig13673.2261.1|Name=mRNA_H-paniculata_contig13673.2261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2406bp|location=Sequence derived from alignment at H-paniculata_contig13673:1510..3780+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACGAAGACTAAGCGCCTTACTAGCAGCTCTAAGGCAGCGGCGGCGGCGGG
GCGAAGCGGCAAAGGAAAGATGCCAGCCGCCGAACCGCCGCTACCACCGC
CGCCGCCTCCCCGCCACGGCGGTTACGTGGATAGCGCAGACTTCAACGTG
GGCACTTATACGGCAAAGAGGGCCAAAACTCGAGCTCGACCAGACGAAGA
CTAAGCGCCTTACTAGCAGCTCTAAGGCAGCGGCGGCGGCGGGGCGAAGC
GGCAAAGGAAAGATGCCAGCCGCCGAACCGCCGCTACCACCGCCGCCGCC
TCCCCGCCACGGCGGTTACGTGGATAGCGCAGACTTCAACGTGGGCACTT
ATACGGCAAAGAGGGCCAAAACTCGAGCTCGACCAGTGAAACCAAGCAAG
CGGAGGACGACGACACCTACGAAAGTGGCTCCCTGCGTTGCCTGTGAAAA
CGATCAACACGTACTGCAGCACAACGCCACGTCTCAAGCGAAAACGCCAT
CGTCCAGAACAACGACACAAAAGTCTACTTCTGTGGCGGCGGGGGTGGGA
GTACCGAAAATACCGGGAGTACCGTTCGTTGGGTCTGGCAAAGCGCCGGA
ATCGTACAACGTTGTGTCTGCCGTGAGCAAAGCGTTGAGGACGGCGCGGA
AAGGACGGCCAAGAGAGTGAAACCAAGCAAGCGGAGGACGACGACACCTA
CGAAAGTGGCTCCCTGCGTTGCCTGTGAAAACGATCAACACGTACTGCAG
CACAACGCCACGTCTCAAGCGAAAACGCCATCGTCCAGAACAACGACACA
AAAGTCTACTTCTGTGGCGGCGGGGGTGGGAGTACCGAAAATACCGGGAG
TACCGTTCGTTGGGTCTGGCAAAGCGCCGGAATCGTACAACGTTGTGTCT
GCCGTGAGCAAAGCGTTGAGGACGGCGCGGAAAGGACGGCCAAGAGAGTC
CTTGGACGTGCTATACGCCGACGTAGGCGCCGCGGTGCTCGACAGTGCGA
GCGACGTGCCTTTCATGTTTCAACAGCGGCAGCCTTCATCGCCATCGCCA
TCCCTGCCAATACCTATACGGCGTGGGAAGAAAAAAAAGACGGCGACGGG
GGCGGCGGTGGGGAAAGATAGACGTGGTGGCAATCATGGGAGGGTGAGGG
TGACAGGAGACGGTCGAGCCGTACTGAACGTGGAAATGCCAGTCCTTGGA
CGTGCTATACGCCGACGTAGGCGCCGCGGTGCTCGACAGTGCGAGCGACG
TGCCTTTCATGTTTCAACAGCGGCAGCCTTCATCGCCATCGCCATCCCTG
CCAATACCTATACGGCGTGGGAAGAAAAAAAAGACGGCGACGGGGGCGGC
GGTGGGGAAAGATAGACGTGGTGGCAATCATGGGAGGGTGAGGGTGACAG
GAGACGGTCGAGCCGTACTGAACGTGGAAATGCCAGATGTCGGCAGTCTA
AACCTCGACGCGGAACCATTACTCCCCCGCCAAACTCATCACGGTGAGCA
CTTGCGGTATGCAGCAAAACCTGGCGTCGGCCATTGGGTCGAGGCTTCCA
GCGAAGGAGATGGGGGGGAGGCGAGGGGCGCAAGCCTGCCGGAGTACTGG
AATCAGCGATGGGATGAAGCGGAAGGTCGAGACCGCAGGGGCAGGGCGAG
GAGGGGTGAGGGATCGCGCAGAGGAAGGAGGAAAGTGCCCCCCGCCGTCG
CCGGAAGCACCAACGGTAGAGTGGCGGCGATGGCGGCGGCGGCCGACGGG
GGTAAGAGTCGAGGGTTCAGCGGTCGGGGAGAGAATTTGGATGATGATGA
CGACGACGATGAGGATGGGGTTGAGGATGGCGCGTGGGGGAGAGGAGCGA
CTCACGGTGGGAACGATCGGCAAAATTATCTTGGGAGCGGTTCTCGGAAG
GGTCCGCGAAGGAATGAGGAGATGTCGGCAGTCTAAACCTCGACGCGGAA
CCATTACTCCCCCGCCAAACTCATCACGGTGAGCACTTGCGGTATGCAGC
AAAACCTGGCGTCGGCCATTGGGTCGAGGCTTCCAGCGAAGGAGATGGGG
GGGAGGCGAGGGGCGCAAGCCTGCCGGAGTACTGGAATCAGCGATGGGAT
GAAGCGGAAGGTCGAGACCGCAGGGGCAGGGCGAGGAGGGGTGAGGGATC
GCGCAGAGGAAGGAGGAAAGTGCCCCCCGCCGTCGCCGGAAGCACCAACG
GTAGAGTGGCGGCGATGGCGGCGGCGGCCGACGGGGGTAAGAGTCGAGGG
TTCAGCGGTCGGGGAGAGAATTTGGATGATGATGACGACGACGATGAGGA
TGGGGTTGAGGATGGCGCGTGGGGGAGAGGAGCGACTCACGGTGGGAACG
ATCGGCAAAATTATCTTGGGAGCGGTTCTCGGAAGGGTCCGCGAAGGAAT
GAGGAG back to top
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