mRNA_H-paniculata_contig13646.2246.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: D8LSR3_ECTSI (Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR3_ECTSI) HSP 1 Score: 422 bits (1086), Expect = 5.060e-142 Identity = 206/259 (79.54%), Postives = 222/259 (85.71%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYWYLMQDG IEFEIKLSGELSTNL+SEGE P HGVIVAPGVNAQLHQHMFCARLDMSVDG KNTV+E DVVRVP+ D NP GNAF+A YTPLVTEKQAQR++ P AARSW IQN SS+NP+NG+PV YKL+PQT GPTHP L+TG +SAVTARG FATKALWVTPH D ERWPAGDFTVQS GG GLPAWT DR VE+ED+VLWHSFGL+HVPRVEDFPVMPCE TGFTLKPD FFSGNP IDL Sbjct: 408 VNYEYLFYWYLMQDGSIEFEIKLSGELSTNLLSEGEPT--PQHGVIVAPGVNAQLHQHMFCARLDMSVDGHKNTVKEADVVRVPRGED-NPAGNAFRAQYTPLVTEKQAQREANPRAARSWLIQNPSSINPINGKPVAYKLVPQTFGPTHPLLMTGEDSAVTARGEFATKALWVTPHRDDERWPAGDFTVQSTGGE---GLPAWTKHDRNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDL 660
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A6H5KQ64_9PHAE (Amine oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQ64_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 4.220e-139 Identity = 207/261 (79.31%), Postives = 222/261 (85.06%), Query Frame = 1 Query: 10 RYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQ-----HMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 RYLFYWYLMQDGRIEFEIKLSGELSTNL+SEGES P HGVIVAPGVNAQLHQ HMFCARLDMSVDG+KNTV+E DVVRVP D NP NAF+A YTPLVTEKQAQR++ P AARSW IQN SS+NP+NG+PV YKL+PQT GPTHP L+TG +SAVTARG FATKALWVTPH D ERWPAGDFTVQS GG GLPAWT DR VE+ED+VLWHSFGL+HVPRVEDFPVMPCE TGFTLKPD FFSGNP IDL Sbjct: 448 RYLFYWYLMQDGRIEFEIKLSGELSTNLLSEGEST--PQHGVIVAPGVNAQLHQAWMTPHMFCARLDMSVDGQKNTVKEADVVRVPCGED-NPASNAFRAQYTPLVTEKQAQREANPRAARSWLIQNPSSINPINGKPVAYKLVPQTFGPTHPLLMTGEDSAVTARGEFATKALWVTPHRDDERWPAGDFTVQSTGGE---GLPAWTKHDRNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDL 702
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A7S1DXA7_HEMAN (Amine oxidase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DXA7_HEMAN) HSP 1 Score: 323 bits (828), Expect = 1.080e-107 Identity = 155/259 (59.85%), Postives = 186/259 (71.81%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYW QDG I++EIKLSGELSTNL+S GE P HGVIVAPGVN+Q HQHMFC RLD+ V G NTV E+D++ P P +NPYGN FK T L TEK+ R P AR W I N S LN ++G+PV YKL+P TRGP P LL P+ AV +G FATK LWVTP++ ER+PAG+FT Q G + GLPAWT+ DR ++ +D+VLWH FG+ H+PRVEDFPVMPCE+TGFTLKPD F GNP ID+ Sbjct: 62 VNYEYLFYWRFKQDGTIDYEIKLSGELSTNLMSAGEDV--PSHGVIVAPGVNSQYHQHMFCTRLDVEVAGASNTVSEIDIITEPMSP-SNPYGNCFKPQETTLRTEKEGIRTGDPMKARHWKISNPSILNSISGKPVAYKLIPFTRGPAQPPLLVSPDCAVAKKGMFATKHLWVTPYSPSERYPAGEFTPQGDGSN---GLPAWTAQDRQLDGQDVVLWHCFGVAHIPRVEDFPVMPCEVTGFTLKPDGFSLGNPGIDI 314
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A7S1GM92_CYCTE (Amine oxidase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM92_CYCTE) HSP 1 Score: 320 bits (821), Expect = 1.020e-106 Identity = 160/261 (61.30%), Postives = 188/261 (72.03%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSS-LNPLNGRPVGYKLLPQTRGPTHPALLTGPES-AVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYW L DG I+FEI+LSGELSTNL S GE P+ G +VAPGVNAQ+HQHMFCARLDM VDG KNTV EVDVV +P NPYGNAF A T L TE++A R ARSW I N+ +N ++G+PV YKL+P TRGP P L+T PE AV+ +GAFA LWVTP D ER+PAG++T Q+ E GLP W ++R +E ED+VLWHSFG+ HVPRVEDFPVMPCE TGFTLKPD F GNPAID+ Sbjct: 48 VNYEYLFYWRLKLDGTIDFEIRLSGELSTNLPSAGEDPTNPEWGTLVAPGVNAQVHQHMFCARLDMEVDGTKNTVSEVDVVPMPYDAVHNPYGNAFGASETVLTTEQEAVRTYDANKARSWKISNAEGKVNSISGKPVAYKLIPFTRGPAQPPLITHPEECAVSHKGAFAKAHLWVTPQTDTERYPAGEYTPQAL---EPDGLPKWIQSNRNIEGEDVVLWHSFGVTHVPRVEDFPVMPCETTGFTLKPDGFSMGNPAIDM 305
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A830HQ12_9CHLO (Amine oxidase n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HQ12_9CHLO) HSP 1 Score: 327 bits (837), Expect = 3.940e-104 Identity = 164/259 (63.32%), Postives = 194/259 (74.90%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYW L QDG IEF+IKLSGELSTNL+SEGE A P +GV+VAPGVNAQ+HQHMFCARLDM VDG N+V EVDV +P +NP+GNAFKA T L TE A+R A R+W I N S +N ++G PVGYKL+P T G P L+T P AV RG FATK LWVT H+D ER+PAG++T QS G A GLP WTS +R+VEN D+V WH+FG++HVPR EDFPVMPCE TGF LKPD+FF+GNP+IDL Sbjct: 454 VNYEYLFYWTLHQDGSIEFQIKLSGELSTNLLSEGEEA--PAYGVMVAPGVNAQVHQHMFCARLDMDVDGSANSVAEVDVETLPVDA-SNPHGNAFKAKKTVLKTESDAKRTYDSNACRTWKIFNPSKINEISGEPVGYKLVPFTSGAAQPTLMTSPSCAVNTRGEFATKNLWVTSHSDDERYPAGEWTPQSTG---ALGLPEWTSKNRSVENTDVVCWHAFGVMHVPRPEDFPVMPCETTGFMLKPDNFFTGNPSIDL 706
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A448ZC22_9STRA (Amine oxidase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC22_9STRA) HSP 1 Score: 321 bits (822), Expect = 9.340e-102 Identity = 160/260 (61.54%), Postives = 188/260 (72.31%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSS-LNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYW+L QDG I+F+IKLSGELSTNL+S+GES P HGV+VAP VNAQ+HQHMFCARLDMSVD KN++ EVD+ P DTNPYGN F T L E+ A+R ARSW I N+ N + G+PV YKLLP + GP+ P LLT P AVT +G FATK LWVTPH+D ER+PAG+ TV G GLP WT A+R ++ ED+VLWH+FG+ HVPR EDFPVMPCE TGFTLKPD FF GNP IDL Sbjct: 465 VNYEYLFYWHLRQDGCIDFKIKLSGELSTNLLSDGESV--PSHGVMVAPNVNAQIHQHMFCARLDMSVDSHKNSISEVDMYSEP-FSDTNPYGNCFNVKETILEDEESAKRVYDANKARSWKIFNAEGKTNGMTGKPVAYKLLPFSMGPSQPILLTDPSCAVTKKGEFATKHLWVTPHSDKERYPAGECTVLGDGSD---GLPDWTKANRNLQGEDLVLWHAFGVAHVPRTEDFPVMPCETTGFTLKPDGFFDGNPGIDL 718
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: K8EHE4_9CHLO (Amine oxidase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EHE4_9CHLO) HSP 1 Score: 319 bits (817), Expect = 1.540e-101 Identity = 157/260 (60.38%), Postives = 188/260 (72.31%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHN-DLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFY+Y QDG IEFEIKL+GELSTN +S GES P HGV+VAPGVN+Q+HQHMFCARLD+++DG +N V E+D+ T N F V TPLVTE QA+R AR W I N SSLNP+ +PV YKL+P TRGP P LLTGPE AVT +G FATK LWVTP+N ERWPAG+FTVQ G+ GLP WT DR + + ++V+WH+FG+VH+PR EDFPVMP E TGF+LKPD FF+GNP IDL Sbjct: 418 VNYEYLFYYYFQQDGTIEFEIKLTGELSTNAISAGESNDDPTHGVLVAPGVNSQIHQHMFCARLDVAIDGNENEVSEIDIC---SDTSTGSCQNVFGPVTTPLVTELQARRVCDSTKARVWKISNPSSLNPVTKKPVSYKLIPFTRGPAMPTLLTGPECAVTKKGEFATKNLWVTPYNWPNERWPAGEFTVQ---GALGEGLPEWTKDDRDISSGELVIWHAFGVVHIPRPEDFPVMPVEHTGFSLKPDGFFAGNPTIDL 671
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A7S2XTZ3_9STRA (Amine oxidase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTZ3_9STRA) HSP 1 Score: 320 bits (819), Expect = 4.030e-101 Identity = 162/261 (62.07%), Postives = 192/261 (73.56%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVS-EGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSS-LNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYW L QDG I+FEIKLSGELSTNL+S E E +G IVA GVNAQ+HQHMFCARLDM+VDG NTV EVDVV H NPYGNAF V T L TE A R ARSW I N+ NP+N +PV YKL+P +RG +HP LLT PESAV+ +GAFA L+VTPH+D ER+PAG++T Q G + GLP W +A+R++E++D+VLWHSFG+ H+PRVEDFPVMPCE TGF LKPD FF+GNPAIDL Sbjct: 477 VNYEYLFYWRLKQDGTIDFEIKLSGELSTNLLSAEEEKTGKSTYGTIVARGVNAQIHQHMFCARLDMAVDGDINTVSEVDVVASGSH--NNPYGNAFGPVETTLTTESGASRTYDATKARSWKISNAEGKTNPVNDKPVAYKLIPFSRGGSHPTLLTSPESAVSKKGAFANYHLFVTPHSDTERFPAGEYTPQGNGSN---GLPDWMAANRSIESKDVVLWHSFGVTHMPRVEDFPVMPCETTGFMLKPDGFFAGNPAIDL 732
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A1Z5JVD1_FISSO (Amine oxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVD1_FISSO) HSP 1 Score: 309 bits (791), Expect = 6.460e-98 Identity = 154/262 (58.78%), Postives = 194/262 (74.05%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRK-NTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVEN--EDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYW L QDG I+FEIKLSGELSTNL+S ES P HGV+VAPGVN+Q+HQHMFCARLDM+VDG + NTV+EVD+V P P +NPYGN F+ V T L TE+ A R AR+W I +S+ NP+NG+ YKL+P ++G P L+T P SAV +G FAT LWVTP++ ER+PAG++T Q G GLP WTS DR++ + E IV+WH+FG++HVPR+EDFPVMPCE+TGF+LKPD+FF GNP ID+ Sbjct: 385 VNYEYLFYWRLKQDGMIDFEIKLSGELSTNLLSAPESDGRPTHGVLVAPGVNSQIHQHMFCARLDMAVDGAEHNTVREVDIVSRPVDPVSNPYGNVFEPVETLLTTEQAAIRTLDVTKARTWKI-SSNKTNPINGKLTSYKLVPFSKGAAQPVLMTDPSSAVFKKGTFATSHLWVTPYHPKERFPAGEYTPQGDGSV---GLPQWTSQDRSLLDCPEGIVVWHAFGVLHVPRIEDFPVMPCEITGFSLKPDNFFLGNPGIDI 642
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Match: A0A2V3J6I3_9FLOR (Amine oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I3_9FLOR) HSP 1 Score: 301 bits (771), Expect = 9.040e-95 Identity = 151/259 (58.30%), Postives = 190/259 (73.36%), Query Frame = 1 Query: 1 LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGVNAQLHQHMFCARLDMSVDGRKNTVQEVDVVRVPKHPDTNPYGNAFKAVYTPLVTEKQAQRDSAPEAARSWTIQNSSSLNPLNGRPVGYKLLPQTRGPTHPALLTGPESAVTARGAFATKALWVTPHNDLERWPAGDFTVQSRGGSEAGGLPAWTSADRTVENEDIVLWHSFGLVHVPRVEDFPVMPCEMTGFTLKPDSFFSGNPAIDL 777 +N YLFYWYL DG I EIKLSGELSTNL+SEGE+ P GVIVAPGVNAQ+HQHMFCARL+M+VDG +N+V+EV++V + NP+GN F+ T L +E+ AQRD+A AAR+W I N N ++G+ V YKL+P T G P LLT +SAV+ RG FA KA+WVTP+ E++PAG+F QS GG GLP+WTS +R++ +E IV+WHSFG+ HVPR EDFP+MPCE TGFTLKPD F GNP +D+ Sbjct: 416 VNYEYLFYWYLHHDGSISHEIKLSGELSTNLLSEGETH--PTAGVIVAPGVNAQIHQHMFCARLEMAVDGAQNSVEEVNLVAA-EEGSHNPFGNIFRVESTLLRSEQDAQRDAA--AARTWRIFNPHKSNTISGKKVAYKLVPYTFGAFQPPLLTTDDSAVSKRGRFAKKAIWVTPYRKDEQFPAGEFPTQSLGGD---GLPSWTSQNRSIVDERIVIWHSFGVAHVPRTEDFPIMPCESTGFTLKPDCFLMGNPGVDI 666 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13646.2246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13646.2246.1 >prot_H-paniculata_contig13646.2246.1 ID=prot_H-paniculata_contig13646.2246.1|Name=mRNA_H-paniculata_contig13646.2246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=259bp LNGRYLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESARAPDHGVIVAPGback to top mRNA from alignment at H-paniculata_contig13646:3838..5825+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13646.2246.1 ID=mRNA_H-paniculata_contig13646.2246.1|Name=mRNA_H-paniculata_contig13646.2246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1988bp|location=Sequence derived from alignment at H-paniculata_contig13646:3838..5825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13646:3838..5825+ >mRNA_H-paniculata_contig13646.2246.1 ID=mRNA_H-paniculata_contig13646.2246.1|Name=mRNA_H-paniculata_contig13646.2246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1554bp|location=Sequence derived from alignment at H-paniculata_contig13646:3838..5825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |