prot_H-paniculata_contig13642.2245.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13642.2245.1
Unique Nameprot_H-paniculata_contig13642.2245.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length161
Homology
BLAST of mRNA_H-paniculata_contig13642.2245.1 vs. uniprot
Match: A0A6H5JP61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP61_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.030e-42
Identity = 88/173 (50.87%), Postives = 104/173 (60.12%), Query Frame = 0
Query:    8 IHDNVAQEETGE-AGAVLNGEGCSLWFRGSVSWMKNRGYNAAAMLNKGKVMFQEALLVQDNGAAMDGGGFINETGAEMSFCSNVEFIANVGTGYGGAILNHAALTFK-GGDGAIVL-------------------FQDNYCGEQECHDIQNKDGSDVSGLES-VPDLCAIGTQ 158
            I DNV+QEE    AGAV N     ++    +SW  N GY A A+LN G+++F+  + V+DN A MDGGGFINE+G  + F    EF++NVGTG GGAILNHA L F  GGD                        FQDNYCGEQEC DIQNKDGS + GL   VPDLC IGTQ
Sbjct:   99 ITDNVSQEEASSVAGAVWNQADSVVFCTAMMSWEGNSGYQAGALLNAGRMVFRGEVSVRDNTAVMDGGGFINESGGRILFFHGAEFLSNVGTGSGGAILNHAELDFAPGGDXXXXXXXXXXXXXXXSTTRTFTLDFQDNYCGEQECQDIQNKDGSSILGLHQYVPDLCDIGTQ 271          
BLAST of mRNA_H-paniculata_contig13642.2245.1 vs. uniprot
Match: D8LLD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD1_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 5.440e-37
Identity = 88/180 (48.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    3 QPNSIIHDNVAQE-ETGEAGAVLNGEGCSLWFRGSVSWMKNRGYNAAAMLNKGKVMFQEALLVQDNGAAMDGGGFINETGAEMSFCSNVEFIANVGTGYGGAILNHAALTFK-GGDGAIVL---------------------FQDNYCGEQECHDIQNKDGSDVSGLES-VPDLCAIGTQ 158
            Q  SII DNV+QE E+  AGAV N     ++    VSW  N GY A A+LN G+++F+  + V+DN A MDGGGFINE+G  + F    EF++NVGTG GGAILN   L F  GGD                          F+DNYCGEQEC DIQNKDGS V GL   V +LC IGTQ
Sbjct:  289 QEMSII-DNVSQEDESSVAGAVWNQADSVVFCTAMVSWEGNSGYQAGALLNAGRMVFRGEVSVRDNTAVMDGGGFINESGGRVLFFHGAEFLSNVGTGSGGAILNRGELDFTPGGDXXXXXXXXXXXXXXXXXXTTRTFTLDFEDNYCGEQECQDIQNKDGSSVLGLHQYVSNLCDIGTQ 467          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13642.2245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP61_9PHAE1.030e-4250.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLD1_ECTSI5.440e-3748.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13642contigH-paniculata_contig13642:2639..6219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13642.2245.1mRNA_H-paniculata_contig13642.2245.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13642 1758..6263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13642.2245.1 ID=prot_H-paniculata_contig13642.2245.1|Name=mRNA_H-paniculata_contig13642.2245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
MHQPNSIIHDNVAQEETGEAGAVLNGEGCSLWFRGSVSWMKNRGYNAAAM
LNKGKVMFQEALLVQDNGAAMDGGGFINETGAEMSFCSNVEFIANVGTGY
GGAILNHAALTFKGGDGAIVLFQDNYCGEQECHDIQNKDGSDVSGLESVP
DLCAIGTQVL*
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