prot_H-paniculata_contig1363.2240.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1363.2240.1
Unique Nameprot_H-paniculata_contig1363.2240.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
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BLAST of mRNA_H-paniculata_contig1363.2240.1 vs. uniprot
Match: D8LGR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR1_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.880e-33
Identity = 64/94 (68.09%), Postives = 72/94 (76.60%), Query Frame = 0 
Query:    4 AYDMIVLSEVLYWPALDLLEEDTREPLRSTLVALSGEGTHVVLVYKERWPEREEGFLDMCRPDFEVEAIPLSSVDLPTSTQEDPGSDTIRAVHM 97
            A+D+IVLSEVLYWPALDLL+EDTREPLR TLV LS  GT V+L+YKERWPERE  FL  C   FEV  IP   + LPT++ EDPGS  IRAV M
Sbjct:  247 AFDVIVLSEVLYWPALDLLQEDTREPLRRTLVGLSKPGTKVILIYKERWPEREAEFLRTCEASFEVGDIPADLLALPTASTEDPGSAAIRAVVM 340
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BLAST of mRNA_H-paniculata_contig1363.2240.1 vs. uniprot
Match: A0A6H5J7D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D3_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.070e-33
Identity = 63/94 (67.02%), Postives = 72/94 (76.60%), Query Frame = 0 
Query:    4 AYDMIVLSEVLYWPALDLLEEDTREPLRSTLVALSGEGTHVVLVYKERWPEREEGFLDMCRPDFEVEAIPLSSVDLPTSTQEDPGSDTIRAVHM 97
            A+D+IVLSEVLYWPALDLL+EDTREPLR TLV LS  GT V+L+YKERWPERE  FL  C   FEV  IP   + +PT++ EDPGS  IRAV M
Sbjct:  237 AFDVIVLSEVLYWPALDLLQEDTREPLRRTLVGLSKPGTKVILIYKERWPEREAEFLRSCEASFEVGDIPADLLAMPTASTEDPGSAAIRAVVM 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1363.2240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGR1_ECTSI1.880e-3368.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7D3_9PHAE3.070e-3367.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 2..105
e-value: 1.3E-10
score: 43.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1363contigH-paniculata_contig1363:2846..5039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1363.2240.1mRNA_H-paniculata_contig1363.2240.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1363 2772..5051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1363.2240.1 ID=prot_H-paniculata_contig1363.2240.1|Name=mRNA_H-paniculata_contig1363.2240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MRLAYDMIVLSEVLYWPALDLLEEDTREPLRSTLVALSGEGTHVVLVYKE
RWPEREEGFLDMCRPDFEVEAIPLSSVDLPTSTQEDPGSDTIRAVHMRRR
RQAVRRAG*
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