prot_H-paniculata_contig1362.2236.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1362.2236.1
Unique Nameprot_H-paniculata_contig1362.2236.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length576
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1362.2236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 509..529
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 339..359
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 447..451
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 418..423
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..274
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 504..508
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 424..446
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 472..482
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 530..575
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 452..471
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 396..417
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 483..503
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 360..395
NoneNo IPR availableTMHMMTMhelixcoord: 126..145
NoneNo IPR availableTMHMMTMhelixcoord: 340..362
NoneNo IPR availableTMHMMTMhelixcoord: 396..418
NoneNo IPR availableTMHMMTMhelixcoord: 425..447
NoneNo IPR availableTMHMMTMhelixcoord: 507..529
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 451..473
NoneNo IPR availableTMHMMTMhelixcoord: 480..502
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1362contigH-paniculata_contig1362:12275..23055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1362.2236.1mRNA_H-paniculata_contig1362.2236.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1362 1482..23151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1362.2236.1 ID=prot_H-paniculata_contig1362.2236.1|Name=mRNA_H-paniculata_contig1362.2236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=576bp
MLLCMIGAGSDAFEGGKIEMDSFLEDIYFVANIIGFTVMAFLCVGVLYLG
YLVCWEAEPGGHTVMYWLLSDGWEAARRRLLRFKRQAWQVGVALASFVIK
AARVAPLRLQMWVHVFIMDLHEHGKPVLLCLGMSTAISLVLLVSFTPTLI
MIAKIIIFAMITIPVACIWRGRHVYVRSTRTTRWAQDLDKHCAQIWLDPW
WVQGQEEAVRRAGVQVELKRKPVSRWALLKARFMPIVGPIAVSLQGIWKC
LSRLVLWSTFGMVLLTGCASMPLVTEETHSRPPQTQADARDMMQHAGRRF
NVYDSALFLSKDGVQQQPEGLDGSIIECSMGRLRTPKTMFHFVVASLAFL
MMLVVWPVWTMVSEYNFVAAWARWRPVLYRCYTRVINFIADVHSKVLIRL
ASVLVLPALLVLLLLVLVLPALLVLLLVLPPLLVLPPLLVLLPLLVLPPL
LVLPPLMVLLLLLVLPLLLLYQAPGAPHRVASVSLLLLLLVLLAMLLGVM
LLLLRVLLLPFLLLLLLLLVLLLLPLLLLHQTLDALHRIDTRMDVCVGGS
LLGEMLPMLRQRLQSLLPPLVYLLV*
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