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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | chloroplast |
| Exons | 1 |
| Model size | 1231 |
| Cds size | 1194 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13616.2232.1 >prot_H-paniculata_contig13616.2232.1 ID=prot_H-paniculata_contig13616.2232.1|Name=mRNA_H-paniculata_contig13616.2232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bp
CCLVYVCFFSPQDASSGSAFAAVAVSAASVSSTAAAAVAFSPAFAIVTTA
AVSVPAGGPPLPAIPPSSCFASSPVDSVVPGFTRGGTATSSCTSAFKSSA
AASARATFVSAPASASVSAIATFRAGVISASCAVTAVAFPTPDVIPVSPS
SPLFGFCAARGPSLSVHVGFSLSFVPKAVGISCATAPFAAPATVAAFSVF
LVPPLSQLPATYLVPPSARLVVLPDLPPPRSPAPLLAPLPSSFVSLLPPL
SSRPPDPLLFPRPSSTPAPPEGPTPPPLPPLLQSSVPPLSSFRVPTAPPP
PSFTARLPLSVATPPSSPRSPPVPGLTGSLLPPSPLQPLPSSLPSSPSLW
PPASPRCLSPSQASPSVFSPIPTTPPLPVMHPHSLATASSSPPAPPL* back to topmRNA from alignment at H-paniculata_contig13616:4..1232+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13616.2232.1 ID=mRNA_H-paniculata_contig13616.2232.1|Name=mRNA_H-paniculata_contig13616.2232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1229bp|location=Sequence derived from alignment at H-paniculata_contig13616:4..1232+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCTGCCTTGTATACGTCTGCTTCTTCTCTCCCCAAGATGCCAGCTCTGG
CAGCGCCTTCGCCGCTGTCGCCGTATCCGCTGCATCCGTCTCCTCCACCG
CCGCTGCTGCAGTCGCCTTCTCCCCCGCCTTCGCCATTGTCACCACCGCC
GCTGTCTCCGTCCCAGCTGGCGGTCCTCCCCTCCCTGCTATCCCTCCTTC
CTCGTGCTTCGCCTCGTCCCCAGTTGACAGCGTTGTCCCCGGCTTCACCC
GCGGCGGCACCGCTACGTCTTCTTGCACCTCTGCTTTCAAATCCTCCGCC
GCCGCCTCCGCCCGCGCCACCTTCGTCTCCGCTCCTGCGTCTGCCTCCGT
CTCTGCCATTGCGACCTTCCGTGCTGGCGTCATTTCCGCTTCTTGTGCCG
TCACCGCCGTCGCCTTCCCCACTCCCGATGTCATACCTGTCTCCCCCTCG
TCCCCACTCTTCGGGTTCTGCGCCGCGCGCGGTCCGTCCCTCAGCGTCCA
CGTTGGCTTCAGCCTCTCCTTTGTTCCTAAAGCCGTCGGCATTAGCTGCG
CCACCGCTCCCTTTGCGGCCCCCGCCACCGTCGCCGCTTTCAGTGTCTTC
CTTGTTCCACCTCTCTCGCAGTTGCCAGCGACATACCTGGTTCCACCATC
AGCGCGTTTAGTAGTTCTTCCTGATCTTCCGCCTCCAAGGTCGCCGGCGC
CGCTACTGGCGCCGTTGCCGTCTTCGTTCGTTTCGTTACTTCCACCGCTT
TCATCGCGGCCGCCTGACCCGCTGCTGTTTCCACGACCTTCGTCGACTCC
TGCGCCGCCGGAGGGGCCTACTCCACCACCGCTACCTCCGCTCCTCCAGT
CATCAGTCCCCCCGTTATCCTCGTTCCGCGTACCCACCGCCCCACCGCCT
CCTTCATTTACAGCACGGCTTCCGCTCTCAGTGGCGACGCCACCGTCGTC
TCCCCGTTCCCCTCCGGTCCCAGGGTTGACGGGGTCTCTGCTGCCTCCGT
CGCCGCTGCAGCCATTGCCGTCCTCCCTGCCTTCTTCACCTTCCCTGTGG
CCACCTGCTTCGCCTCGGTGTCTATCGCCTTCGCAGGCGTCGCCGTCGGT
ATTTTCTCCCATTCCGACAACCCCCCCGTTACCAGTGATGCATCCGCACT
CACTAGCGACGGCTTCTTCATCTCCACCCGCGCCTCCGCTGTGAGGACTA
TCGATTCCGGTGCCGACGCTAACTCTTTC back to topCoding sequence (CDS) from alignment at H-paniculata_contig13616:4..1232+ >mRNA_H-paniculata_contig13616.2232.1 ID=mRNA_H-paniculata_contig13616.2232.1|Name=mRNA_H-paniculata_contig13616.2232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2388bp|location=Sequence derived from alignment at H-paniculata_contig13616:4..1232+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCTGCCTTGTATACGTCTGCTTCTTCTCTCCCCAAGATGCCAGCTCTGG
CAGCGCCTTCGCCGCTGTCGCCGTATCCGCTGCATCCGTCTCCTCCACCG
CCGCTGCTGCAGTCGCCTTCTCCCCCGCCTTCGCCATTGTCACCACCGCC
GCTGTCTCCGTCCCAGCTGGCGGTCCTCCCCTCCCTGCTATCCCTCCTTC
CTCGTGCTTCGCCTCGTCCCCAGTTGACAGCGTTGTCCCCGGCTTCACCC
GCGGCGGCACCGCTACGTCTTCTTGCACCTCTGCTTTCAAATCCTCCGCC
GCCGCCTCCGCCCGCGCCACCTTCGTCTCCGCTCCTGCGTCTGCCTCCGT
CTCTGCCATTGCGACCTTCCGTGCTGGCGTCATTTCCGCTTCTTGTGCCG
TCACCGCCGTCGCCTTCCCCACTCCCGATGTCATACCTGTCTCCCCCTCG
TCCCCACTCTTCGGGTTCTGCGCCGCGCGCGGTCCGTCCCTCAGCGTCCA
CGTTGGCTTCAGCCTCTCCTTTGTTCCTAAAGCCGTCGGCATTAGCTGCG
CCACCGCTCCCTTTGCGGCCCCCGCCACCGTCGCCGCTTTCAGTGTCTTC
CTTGTTCCACCTCTCTCGCAGTTGCCAGCGACATACCTGGTTCCACCATC
AGCGCGTTTAGTAGTTCTTCCTGATCTTCCGCCTCCAAGGTCGCCGGCGC
CGCTACTGGCGCCGTTGCCGTCTTCGTTCGTTTCGTTACTTCCACCGCTT
TCATCGCGGCCGCCTGACCCGCTGCTGTTTCCACGACCTTCGTCGACTCC
TGCGCCGCCGGAGGGGCCTACTCCACCACCGCTACCTCCGCTCCTCCAGT
CATCAGTCCCCCCGTTATCCTCGTTCCGCGTACCCACCGCCCCACCGCCT
CCTTCATTTACAGCACGGCTTCCGCTCTCAGTGGCGACGCCACCGTCGTC
TCCCCGTTCCCCTCCGGTCCCAGGGTTGACGGGGTCTCTGCTGCCTCCGT
CGCCGCTGCAGCCATTGCCGTCCTCCCTGCCTTCTTCACCTTCCCTGTGG
CCACCTGCTTCGCCTCGGTGTCTATCGCCTTCGCAGGCGTCGCCGTCGGT
ATTTTCTCCCATTCCGACAACCCCCCCGTTACCAGTGATGCATCCGCACT
CACTAGCGACGGCTTCTTCATCTCCACCCGCGCCTCCGCTGTGATGCTGC
CTTGTATACGTCTGCTTCTTCTCTCCCCAAGATGCCAGCTCTGGCAGCGC
CTTCGCCGCTGTCGCCGTATCCGCTGCATCCGTCTCCTCCACCGCCGCTG
CTGCAGTCGCCTTCTCCCCCGCCTTCGCCATTGTCACCACCGCCGCTGTC
TCCGTCCCAGCTGGCGGTCCTCCCCTCCCTGCTATCCCTCCTTCCTCGTG
CTTCGCCTCGTCCCCAGTTGACAGCGTTGTCCCCGGCTTCACCCGCGGCG
GCACCGCTACGTCTTCTTGCACCTCTGCTTTCAAATCCTCCGCCGCCGCC
TCCGCCCGCGCCACCTTCGTCTCCGCTCCTGCGTCTGCCTCCGTCTCTGC
CATTGCGACCTTCCGTGCTGGCGTCATTTCCGCTTCTTGTGCCGTCACCG
CCGTCGCCTTCCCCACTCCCGATGTCATACCTGTCTCCCCCTCGTCCCCA
CTCTTCGGGTTCTGCGCCGCGCGCGGTCCGTCCCTCAGCGTCCACGTTGG
CTTCAGCCTCTCCTTTGTTCCTAAAGCCGTCGGCATTAGCTGCGCCACCG
CTCCCTTTGCGGCCCCCGCCACCGTCGCCGCTTTCAGTGTCTTCCTTGTT
CCACCTCTCTCGCAGTTGCCAGCGACATACCTGGTTCCACCATCAGCGCG
TTTAGTAGTTCTTCCTGATCTTCCGCCTCCAAGGTCGCCGGCGCCGCTAC
TGGCGCCGTTGCCGTCTTCGTTCGTTTCGTTACTTCCACCGCTTTCATCG
CGGCCGCCTGACCCGCTGCTGTTTCCACGACCTTCGTCGACTCCTGCGCC
GCCGGAGGGGCCTACTCCACCACCGCTACCTCCGCTCCTCCAGTCATCAG
TCCCCCCGTTATCCTCGTTCCGCGTACCCACCGCCCCACCGCCTCCTTCA
TTTACAGCACGGCTTCCGCTCTCAGTGGCGACGCCACCGTCGTCTCCCCG
TTCCCCTCCGGTCCCAGGGTTGACGGGGTCTCTGCTGCCTCCGTCGCCGC
TGCAGCCATTGCCGTCCTCCCTGCCTTCTTCACCTTCCCTGTGGCCACCT
GCTTCGCCTCGGTGTCTATCGCCTTCGCAGGCGTCGCCGTCGGTATTTTC
TCCCATTCCGACAACCCCCCCGTTACCAGTGATGCATCCGCACTCACTAG
CGACGGCTTCTTCATCTCCACCCGCGCCTCCGCTGTGA back to top
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