mRNA_H-paniculata_contig13599.2221.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: A0A6H5L825_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L825_9PHAE) HSP 1 Score: 218 bits (555), Expect = 5.800e-67 Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 1 Query: 1 LFFRLQLVLGRLPDGRCKNGGCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESLKGLDYSSPEQLREVLGGLRPRYREIFDAGCGTGLLAPLFRDISGT 372 L + + ++LGRLPDGRC GGC +QRME+LRRCLRHDPEH+LCKHNLES LG+SSMTKASPEYVKALFD+YA SFDESLKGLDYSSPE LREVLGGLRPRY+E+FDAGCGTGLL PLFRDI+ T Sbjct: 183 LNYHVSIILGRLPDGRCLQGGCLSQRMEILRRCLRHDPEHALCKHNLESALGDSSMTKASPEYVKALFDYYAVSFDESLKGLDYSSPEALREVLGGLRPRYKEVFDAGCGTGLLGPLFRDITDT 306
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: A0A7S3XSZ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSZ3_HETAK) HSP 1 Score: 96.7 bits (239), Expect = 2.930e-21 Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1 LFFRLQLVLGRLPDGRCKNGGCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESLKGLDYSSPEQLREVLGGL-----RPRYREIFDAGCGTGLLAPLFRDIS 366 L ++L L L RC G C E R+ LR+ P H H L+++L + ++ AS +YVK+LF+ YA +FD SL GL+Y +PE + + + L + + + DAGCGTGL+ PLF IS Sbjct: 105 LQYQLGSALAALDPERCMFGSCPEHAAEAFRKALRYQPGHIQADHALKAVLADPTVETASTDYVKSLFNDYAETFDSSLSGLEYKAPELISQTMHKLLNAAGKKTFNTVVDAGCGTGLIGPLFEGIS 231
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: A0A6U5CXU1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5CXU1_HEMAN) HSP 1 Score: 94.4 bits (233), Expect = 4.560e-20 Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 1 LFFRLQLVLGRLPDGRCKNGGCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESLKG-LDYSSPEQLREVLG---GLRPR--YREIFDAGCGTGLLAPLFRDISGT 372 L + L L LP RC C + + R LRH+P + KH L +++ + T AS YVK+LFD YA SFD++L L+Y +P+ L E + G +P + +FDAGCGTGL PLFR+++ T Sbjct: 236 LHYLLGQALSSLPPNRCLGSPCPERAAQQFRTSLRHNPNNEEAKHALSALISDPETTSASAAYVKSLFDEYAESFDKALVADLNYRAPQLLHEKVSEFVGSKPLPVFGVLFDAGCGTGLCGPLFRNMTRT 365
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: A0A0G4H644_VITBC (Methyltransf_12 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H644_VITBC) HSP 1 Score: 90.1 bits (222), Expect = 1.440e-18 Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 49 CKNGGCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESLKGLDYSSPEQLREVLGGLRPRY------REIFDAGCGTGLLAPLFRDIS 366 C G C E RR LR D +S+ ++L SM +S++T+ASP+YVK+LFD YA++FD+SL+ L Y +P +R + L+ R + D GCGTGL +FR+++ Sbjct: 257 CSPGSCVELAAEHFRRALRFDKSNSIADYSLRSMQKDSTLTEASPDYVKSLFDHYADTFDKSLQKLHYQAPLMIRMAVDRLQESLLVAYPLRNVLDVGCGTGLSGQVFRNVT 368
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: UPI0003A47FEB (tetratricopeptide repeat protein n=1 Tax=Xanthomonas maliensis TaxID=1321368 RepID=UPI0003A47FEB) HSP 1 Score: 75.5 bits (184), Expect = 1.840e-13 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 61 GCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESLK-GLDYSSPEQLREVLGGLRPRYR---EIFDAGCGTGLLAPLFR 357 G + Q + R L HDP +++ H L + G+S+ +A YV+ LFD +A+SFDE L LDY +P++L + L P +I DAGCGTGL APL R Sbjct: 196 GEQTQAQAVYRDWLAHDPNNAVAAHMLAACGGSSAPARADDRYVQHLFDGFADSFDEQLLCHLDYCAPQRLADALATCLPPAAARLDILDAGCGTGLCAPLLR 298
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: A0A7S2HF95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HF95_9EUKA) HSP 1 Score: 73.9 bits (180), Expect = 6.560e-13 Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 19 LVLGRLPDGRCKNGG---CEAQRMEMLRRCLRHDPEHSLCKHNLESML----GNSSMTKASPEYVKALFDFYANSFDESLKGLDYSSPEQLREVLG-------GLRPRYREIFDAGCGTGLLAPLFRDI 363 +++G P G C+ LR L+ +PEH+ +H L S++ G S+M+KASP +V+ALFD ++ SFD+ L L Y+ P L E G +P + DAGCGTGL P R + Sbjct: 230 MLVGVSPGGAATASSMTVCDENAQNALRIALQLEPEHAQAEHMLASLVASSTGASAMSKASPAFVRALFDDFSTSFDQKLAELQYAVPTLLGEAASMYVQQRRGGQP-FSSALDAGCGTGLAGPHLRSL 357
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: I4W0S9_9GAMM (Methyltransferase n=4 Tax=Rhodanobacter TaxID=75309 RepID=I4W0S9_9GAMM) HSP 1 Score: 73.6 bits (179), Expect = 8.680e-13 Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 61 GCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESL-KGLDYSSPEQLREVLGGL--RPRYR-EIFDAGCGTGLLAPL 351 G + +++ R L +P H + +H L S G + +A YV+ +FD +A+SFDE L LDY +P+ L + LGG+ +P R ++ DAGCGTGL APL Sbjct: 188 GRREEALDVYRDWLSREPNHPVPRHMLASCGGGTMPARADDAYVREIFDGFADSFDEQLLNSLDYRAPDVLVDHLGGMLGQPAARLDVLDAGCGTGLCAPL 288
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: UPI001668CCB3 (tetratricopeptide repeat protein n=1 Tax=Dyella nitratireducens TaxID=1849580 RepID=UPI001668CCB3) HSP 1 Score: 73.2 bits (178), Expect = 1.220e-12 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 82 EMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESL-KGLDYSSPEQLREVLGGLRPRYR---EIFDAGCGTGLLAPLFR 357 ++ R L +PEH + +H L + + ++A+ +YV+ +FD +A SFDE L K L+Y +P+ L E LG P +I DAGCGTGL APL R Sbjct: 214 QVYRDWLAREPEHPVPRHMLAACGAAEAPSRAADDYVREVFDAFAESFDEQLLKNLNYRAPQVLAEALGERLPSASGELDILDAGCGTGLCAPLLR 309
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: A0A2S7DD19_9XANT (Methyltransferase n=2 Tax=Xanthomonas cucurbitae TaxID=56453 RepID=A0A2S7DD19_9XANT) HSP 1 Score: 72.8 bits (177), Expect = 1.640e-12 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 61 GCEAQRMEMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESL-KGLDYSSPEQLREVLGGLRPR---YREIFDAGCGTGLLAPLFR 357 G AQ + R L DP +++ H L + G ++ +A YV+ALFD +A+SFDE L LDY +P++L E L P I DAGCGTGL APL R Sbjct: 196 GEHAQAQAVYRAWLACDPGNAVAVHMLAACGGAAAPPRAGDTYVRALFDGFADSFDEQLLHNLDYRAPQRLMEALAACLPAPVAALAILDAGCGTGLCAPLLR 298
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Match: UPI001E4A8732 (tetratricopeptide repeat protein n=1 Tax=Frateuria sp. 5GH9-34 TaxID=2898793 RepID=UPI001E4A8732) HSP 1 Score: 72.4 bits (176), Expect = 2.200e-12 Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 82 EMLRRCLRHDPEHSLCKHNLESMLGNSSMTKASPEYVKALFDFYANSFDESL-KGLDYSSPEQLREVLGGLRPRYR---EIFDAGCGTGLLAPLFR 357 ++ R L +P++ + +H L + G + +A +YV+ LFD +A+SFDE L K LDY +P+ L L G+ P ++ DAGCGTGL APL R Sbjct: 188 QVYRDWLAREPDNPVPRHMLAACGGADAPPRADDDYVRELFDGFADSFDEQLLKNLDYRAPQVLAAALDGVLPAAHGSLDVLDAGCGTGLCAPLVR 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13599.2221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13599.2221.1 >prot_H-paniculata_contig13599.2221.1 ID=prot_H-paniculata_contig13599.2221.1|Name=mRNA_H-paniculata_contig13599.2221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp LFFRLQLVLGRLPDGRCKNGGCEAQRMEMLRRCLRHDPEHSLCKHNLESMback to top mRNA from alignment at H-paniculata_contig13599:130..3429+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13599.2221.1 ID=mRNA_H-paniculata_contig13599.2221.1|Name=mRNA_H-paniculata_contig13599.2221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3300bp|location=Sequence derived from alignment at H-paniculata_contig13599:130..3429+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13599:130..3429+ >mRNA_H-paniculata_contig13599.2221.1 ID=mRNA_H-paniculata_contig13599.2221.1|Name=mRNA_H-paniculata_contig13599.2221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig13599:130..3429+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |