mRNA_H-paniculata_contig13598.2220.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13598.2220.1
Unique NamemRNA_H-paniculata_contig13598.2220.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 3.850e-83
Identity = 170/218 (77.98%), Postives = 175/218 (80.28%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKGKSARRKSRGRRRMEDLLRGPTAVAPSLQPYVAGAGAVETGLYRFLSPITIQDLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------VLPPNWYRAGRGVDDLLNEAEGLDWLADSGGA 618
            +NTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKI KAK NG+HG+VAMD+KG  +RRKSRGRRRMEDLLRG TAVAPSLQPYVAGAGAVETGLYRFLSPITIQDLERPP A   A  GG  XXXXXXXXXXXXX                 XXXXXX            VLPPNWYRAGRGVDDLL EAEGLDWLADSGGA
Sbjct:    4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPITIQDLERPPAA---AGQGGTAXXXXXXXXXXXXXGGASLQSQLAGHATSSAXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLTEAEGLDWLADSGGA 218
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 7.680e-70
Identity = 140/207 (67.63%), Postives = 146/207 (70.53%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKGKSARRKSRGRRRMEDLLRGPTAVAPSLQPYVAGAGAVETGLYRFLSPITIQDL-ERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSGGA 618
            +NTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKI KAK NG+HG+VAMD+KG  +RRKSRGRRRMEDLLRG TAVAPSLQPYVAGAGAVETGLYRFL+          P TA  GA                                          VLPPNWYRAGRGVDDLL EAEGLDWLADSGGA
Sbjct:  572 ENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLAGHASSSAGASPTTATAGAA-----------------------------------TAVAAAVLPPNWYRAGRGVDDLLTEAEGLDWLADSGGA 743
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.370e-38
Identity = 112/215 (52.09%), Postives = 131/215 (60.93%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNG-DHGEVAMDAKG---KSARRKSRGRRRMEDLLRGPTAVAPSLQPYVAGAG---AVETGLYRFLSPITIQ---DLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSGG 615
            +NTGRW+Y+EHRLFL+GLE+HGKGWKKIA LIKTRTVVQIRTHAQKYFQK+ KAK  G + G V +D +G   K+ +RKS         L G TAVAPSLQPY+   G   +VE+GLY+FLSP  I    D ++   A   +R               XXXXXXXX                     P+WY  G  VD LLNEAEGLDWLADSGG
Sbjct:   29 ENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGGAEPGAVLLD-RGLGRKNGKRKS-------GSLEG-TAVAPSLQPYMTLPGVNGSVESGLYKFLSPNVITSFVDDDKAAKAQAASR-------------ASXXXXXXXXAQRAKQGVTPAEAVRMGYAPTPDWYAKGNNVDVLLNEAEGLDWLADSGG 221
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: A0A7S2UGN8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGN8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.460e-28
Identity = 95/272 (34.93%), Postives = 123/272 (45.22%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKG----------------------------------------KSARRKSRGRRRMEDLLRGPTA------VAPSLQPYVAGAG---------AVETGLYRFLSPITIQDLERPPTAD--HGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLP-----------PNWYRAGRGVDDLLNEAEGLDWLADSG 612
            +NTGRWT +EHRLFL+GLE HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+ KA+ NG+ G+V+M+ +G                                         SA+R+ + ++ M    +G ++      VAP+L PYV   G         A+E  L+R+L+P        P TAD   G  P                                        + P           P W+  G  VDDLL EA+ LDWLAD+G
Sbjct:   72 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLSKARQNGEEGDVSMEGRGGIDMLTPGIIVSSALPPSSXXXXXXXXXXXXXXXAISSVVASAQREGK-KQSMAASSKGSSSIPTLPVVAPALAPYVIANGGPQGTISASALENSLFRYLTPAG----SAPSTADPLFGQHPAVNAVARQAGANPIVLPDGAALADSAELSPTGVADQHNLLLFPSWVSDGKESSAPTWFSKGGDVDDLLTEADALDWLADTG 338
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.850e-27
Identity = 93/255 (36.47%), Postives = 120/255 (47.06%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEV-AMDAKGKSARR-KSRGRRRMEDLLRGP---------TAVAPSLQPYVAGA----------------GAVETGLYRFLSPI-----------TIQDLERPPTADHGARPGG----EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLP--------PNWYRAGRGVDDLLNEAEGLDWLADSGG 615
            +NTGRWT +EH LFL+GLE+HGKGWKKIA LIKTRTVVQIRTHAQKYFQK+ KAK NG HG++  M+      +R K  G+RR   L+ G           A++P+LQ Y+ G+                 A+E GLYRFLSP+           T  ++  P T   G    G    +G                                    V          P W+  G  +++LL +A  +DW  DSGG
Sbjct:   98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRR--GLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGG 350
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: A0A6S8P3T4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8P3T4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.970e-27
Identity = 92/254 (36.22%), Postives = 117/254 (46.06%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKG---------------------------KSARRKS----------RGRRRMEDLLRGPT-AVAPSLQPYV----AG--------AGAVETGLYRFLSPITIQDLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSG 612
            +NTGRWT +EHRLFL+GLE HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+ KA+ NG+ GEV M+ +G                              +RK+          +G++   +    P  AVAP+L  +V    AG        + A+E  L+RFL+P  +   + P   D   + G                                         PP WY  G  VD LL+ A  LDWLAD G
Sbjct:   43 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGEVIMEGRGGLSTTAGHDLVGXXXXXXXXXXXXXPLAGTKRKAIQSIVHSAQKQGKKMAVEGKPLPLPAVAPALANFVVRDKAGFAANGTLTSSALEDSLFRFLTPAPVSTTDSPVLNDVARQAGANPITLPSENPSSAPTNGDGEVSPTCVADINIYPSWTDGKDPPAWYAKGADVDALLDVAGTLDWLADPG 296
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.470e-26
Identity = 91/263 (34.60%), Postives = 118/263 (44.87%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKGKSA----------------RRKSRGRRR--MEDLLRGPTAVAPSLQPYVAGA-----------------------------------------GAVETGLYRFLSPITIQDLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSG 612
            +NTGRWT DEHRLFL+GLE HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+ KA+ NG+ G+V+MDA+G +A                RR++ G +R  +  ++   T  A       AG+                                          A+E  L+RFL+P  +   ++    D  AR  G                                         P+WY  G  VD LL+ A+GLDWL D+G
Sbjct:  165 ENTGRWTADEHRLFLQGLEEHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVSMDARGGTASVALGLPVSTSASGKRRRQTTGTKRKAISSVVASVTREAKRXAQQPAGSILPPQQLXXXXXXXXXXXXXXXXXXXXXXXXXSSAHSAITGPALEDSLFRFLTPAPVAPNDQVQVNDV-ARQAGANPITVPTDNPSAAPSISGEVSPTCVTDVAIFPSWTDAKDMPSWYAKGADVDVLLDAADGLDWLTDTG 426
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC)

HSP 1 Score: 124 bits (310), Expect = 1.990e-26
Identity = 89/267 (33.33%), Postives = 117/267 (43.82%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKGKSA--------------RRKSRGRRR----------------MEDLLRGPT----------AVAPSLQPYVA-----------------------GAGAVETGLYRFLSPITIQDLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSG 612
            +NTGRWT +EHRLFL+GLE HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+ KA+ NG+ G+VAM+ +G  A              RR++ G +R                +      PT           VAP+L  Y                            A+E  L+RFL+P+ + +   PP  +   + G                                         PP+WY  G  +D LL+  + LDWL D+G
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAVKEEYVSPTNLSGPALEDSLFRFLTPLPVSE---PPLNEVARQAGANPISLPTDNPSSIPTVGAGEISPTGVSDLMLYPSWTDSKEPPSWYSKGADIDALLDMGDSLDWLDDTG 378
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: B7GAX0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAX0_PHATC)

HSP 1 Score: 124 bits (311), Expect = 8.970e-26
Identity = 89/267 (33.33%), Postives = 117/267 (43.82%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKGKSA--------------RRKSRGRRR----------------MEDLLRGPT----------AVAPSLQPYVA-----------------------GAGAVETGLYRFLSPITIQDLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSG 612
            +NTGRWT +EHRLFL+GLE HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+ KA+ NG+ G+VAM+ +G  A              RR++ G +R                +      PT           VAP+L  Y                            A+E  L+RFL+P+ + +   PP  +   + G                                         PP+WY  G  +D LL+  + LDWL D+G
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAVKEEFVSPTNLSGPALEDSLFRFLTPVPVSE---PPLNEVARQAGANPISLPTDNPSSIPTVGAGEISPTGVSDLMLYPSWTDSKEPPSWYSKGADIDALLDMGDSLDWLDDTG 378
[Close]
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Match: A0A1Z5KDK7_FISSO (Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDK7_FISSO)

HSP 1 Score: 121 bits (303), Expect = 1.170e-25
Identity = 91/267 (34.08%), Postives = 123/267 (46.07%), Query Frame = 1 
Query:    1 QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIQKAKLNGDHGEVAMDAKGKSA----------------RRKSRGRRR--MEDLLRGPT---------------------AVAPSLQPYV-----AGAG--------------AVETGLYRFLSPITI-----QDLERPPTADHGARPGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLNEAEGLDWLADSG 612
            +NTGRWT +EHRLFL+GLE HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+ KA+ NG+ G++ M+ +G +A                RR   G +R  ++ ++                          +AP+L  +V     + AG              A+E  L+RFL+P+ I      D+ R   A+    P   G                                      PP+WY  G  VD LL+ ++ LDWLAD+G
Sbjct:   96 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRGGNASITSNTTATAAMTNKRRRHITGTKRKVIQSVVASAQRQAKKANLTEIGNPSKNVAVPGIAPALAYFVTPTPSSSAGPDTDLMTDDHISGPALEDSLFRFLTPVPIATDHVNDVARQAGANPITLPSTNGQALASVPGRSPTGVQDLSIYPSWTDAKD----------PPSWYAKGADVDALLDVSDTLDWLADTG 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13598.2220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G656_ECTSI3.850e-8377.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H1_9PHAE7.680e-7067.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4FI15_9STRA1.370e-3852.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UGN8_9STRA3.460e-2834.93Hypothetical protein n=1 Tax=Attheya septentrional... [more]
W7TWM0_9STRA2.850e-2736.47SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6S8P3T4_9STRA3.970e-2736.22Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1V9A3_9STRA1.470e-2634.60Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B7GAW9_PHATC1.990e-2633.33Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B7GAX0_PHATC8.970e-2633.33Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KDK7_FISSO1.170e-2534.08Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=15... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13598contigH-paniculata_contig13598:292..5721 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.3
Seed ortholog evalue1.7e-71
Seed eggNOG ortholog2880.D7G656
KEGG koko:K03797,ko:K09391
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin modification-dependent histone binding
EggNOG OGsKOG0724@1,KOG0724@2759
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-11_005250.1
EC3.4.21.102
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03000
Exons3
Model size1815
Cds size1815
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13598.2220.1prot_H-paniculata_contig13598.2220.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13598 292..5721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929075.6468635-CDS-H-paniculata_contig13598:291..16421622929075.6468635-CDS-H-paniculata_contig13598:291..1642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13598 292..1642 -
1691480722.481647-CDS-H-paniculata_contig13598:291..16421691480722.481647-CDS-H-paniculata_contig13598:291..1642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13598 292..1642 -
1622929075.6647158-CDS-H-paniculata_contig13598:2120..23511622929075.6647158-CDS-H-paniculata_contig13598:2120..2351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13598 2121..2351 -
1691480722.4982922-CDS-H-paniculata_contig13598:2120..23511691480722.4982922-CDS-H-paniculata_contig13598:2120..2351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13598 2121..2351 -
1622929075.6831014-CDS-H-paniculata_contig13598:5488..57211622929075.6831014-CDS-H-paniculata_contig13598:5488..5721Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13598 5489..5721 -
1691480722.5083451-CDS-H-paniculata_contig13598:5488..57211691480722.5083451-CDS-H-paniculata_contig13598:5488..5721Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13598 5489..5721 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13598.2220.1

>prot_H-paniculata_contig13598.2220.1 ID=prot_H-paniculata_contig13598.2220.1|Name=mRNA_H-paniculata_contig13598.2220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=605bp
QNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQK
IQKAKLNGDHGEVAMDAKGKSARRKSRGRRRMEDLLRGPTAVAPSLQPYV
AGAGAVETGLYRFLSPITIQDLERPPTADHGARPGGEGGAAAGAGGGGGG
ATVPLNANSAASTTAATAAAAAAAVLPPNWYRAGRGVDDLLNEAEGLDWL
ADSGGAGGPAAAAQAAAAAAAAARPTASSRPPGVPGGTAQVTASGDPISV
TIAAAVAGDLGKRPTAISGAAATAAAASNSPGMSSSPSSVHHPNNKNNKN
NNSNNQPSLKRARSNGSPPAGVLPAGPAATASPGASTTANLSPVAPSGSS
ATAGGTGGGSGVSRAPSPHSSAAAAGGPPGAVAESISAATADGKQPPGRP
SLSHQPHQLSTRTTTAPGVVEGTAAAAAAAGATVASRRPTPPLASADGAP
PTQQPRRGGNTGDSRSVVPPPAATGGIESAASNTAGGAGGLVAAMARATI
ATPSTAAAALLLSHQNSTAQRQAETAISPSSAPLLVMPMPHAANGEGCTV
VAAAAAAAGEPTSPIGPLGSVELSTSGLQGSDEEGHLSGLSDLEGLMEDQ
VNLK*
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mRNA from alignment at H-paniculata_contig13598:292..5721-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13598.2220.1 ID=mRNA_H-paniculata_contig13598.2220.1|Name=mRNA_H-paniculata_contig13598.2220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5430bp|location=Sequence derived from alignment at H-paniculata_contig13598:292..5721- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAATACCGGACGATGGACCTACGACGAGCACCGGCTGTTCCTGCGAGG
GCTAGAGCTTCACGGCAAGGGGTGGAAGAAGATCGCAAGTCTGATCAAGA
CGCGCACTGTGGTACAGATCCGCACGCACGCTCAGAAGTACTTCCAGAAG
ATTCAGAAGGCGAAGTTGAACGGCGACCACGGGGAGGTGGCGATGGACGC
CAAGGGGAAGTCGGCGCGGAGGAAGAGCCGAGGGTGAGATGGAGAGGAAG
GGAGGAAAAGAGAAGGGAGACAGAATGGAAGGGGACAGAGGCAAAGAGAA
AGAAGAGAGAAAGACAAAATAGCTACACACATAGAAGAGAGAGACAGATA
GAGATTGAGAAACAGACAAGGACAGAAAAAAGAGAAACAGACAGAGCCAG
ATGATAAGCAGCAAGAGAGAGGGAGAGAGGGAGAAATATTAGATTTAAGG
GAAAAAACAAAATGTGGGGACAGTAGTGTTTGAGGTGGATCGCAATTTTA
ATGTGTAACTTATGAGGCATTTGAAGCATTATCACGGGAAATATTTTCGT
TTTTTTAACTTTAATTTATTTATTTTTAAATGTTTTCATGTCGAGTCATT
GTTGTTTTTGTTGTTGTTATTGTTGTTGTTGAGAAAAATTACGGGTGTTG
GTGGGCGCTATTTTCTATTTCCTGGAAACACCAAAAGGAGGATTTTTCAT
GTTCATGTTCAGTTTATGAAACAAGCAGCAAACAGCAAGCAGCCCATGTC
CTTCTTGTCTCTTCACCTTGTTCTATCGGTCGCGCTCTTTTTGTTGCTTT
GTTGTACCGACGAAAAAAGGCTCGAACGTTGCCCCCCCCCGCTCCCCGGA
CTCCTTGTGTGGCCGATAAAAATCCCATAACACACACACACACACACACA
CCAGGCTGTGATTAGACGTAGCACTCTGAACAATAACCGTCATGATGCAC
CCCTGAAACAAGCGGACAAAGCGATTTTTTGAAACCTGTGAACGACATGC
CTCCAGGTTTAGCTGGGCGTTCCTATGTCTTTCGTTCGATGTTCAGATGG
CCGCCGATCTATTGACATCAGCCAACAAAAAAAAACTGAACAGCGTTTGC
TGTTGCTTTTTGTCTTGTTCCACCGTAGTGTACCGGGGATATCTGTCGAT
CACCCTGGGTAATTGATATGTGTATAAAACAAATATTTCGAAGTTGTTCC
CAGTAGTACAGCACAATACTGAGTGTACTGCCGAGCACGTTGAGAATTTT
GACATTCAGTGTTGCTTCAGCACAGCCAGTATCGTTGGTACTGTTCAGTA
CTGCCAGTATCGTCAATCTCGAATACTTCTTATGTTTCAGTATCTCCCGT
AATGACTCCCGAAAATACTACTCAGTATTGTTCAGTACCACCAGTATTGT
CACCTCAAAGTAATTAGTATCCTGCAGTAGCGCCAGTATCGTCAGCCCAA
AATAATGGGTATTATTCAGTTCCGCCAGTATTGTCACCCCACGATACTCA
ACATTATACTGAGTATGGTACTGACTGTACTGTACTGTATGTACACTCGT
GGTATGGGATATTGGATACTGGGTTCAAATCAATGTGGCCACCGTCAGAT
GCGCAGGCTTATACCGTGTCTCGGGATAATACATACATACCGCGAGAACT
TTCGGTATGCCCACTCCAAGTCCAGGAAGGATATGAGGCTTGTGTGAGTC
ACTCGCCCACCCAATGAATACGAGCTATTGCATACCGTAGCAAGAGTACT
ACGTATTGTACCAGTCGTTTGGTGTGTGATGTTTAATCAAGGGCATGAGC
GACAGCACAGGATCTGCAGCAGGCTCCAGCTCGGTGGGGGAAAGGGCTGT
TGCTGCCGTCAAAACGCCGAGGGTTCGTCTGGCGGGGGCAAGGCTGAAAG
CTATTGCGGTAGCTGAAAACCATTGCACATTCATGAATTCATGGTGCACG
ACAACAAATGATACACGTGCTTTATTACACTTACGGTCAATACAGCAAAT
ACCCAATATCCTGCCCGTTATGTCCAGTATATCGGTACTATGTATCGCTT
CAGTATCACCAGTGTCACTGCCCCCAAAATACTGGGTACTGTTCAGTATC
GCCAGTATCGTCATCCAAGATACTAGATATTTCTTCAGTACTGCCAGCAT
CGCGACCCCAAAACACTTGATATATTGTTTAGTATCGCCAGTATTGTCAC
CCCGAAATACTGAGTATGTACTAAGTACCATTAGTATCGTCAGCCCAAAC
TACTTAATAATCTCTCTGTATCACCAGTGTATCAACCCCAAAATATTCAG
TATTGTTCAGTACCGCCAGTATTATCATCTAAAAATACTGAATAGGGCAC
TAAGTACCTCACTAGTAAATACTGGTGATACTGTACCATCAGTATCGTCA
GCCCCAAACACTCAGTATCGCTACCGTACCACCAGTATTGTCAGCCTAAA
ATACTTTCTTATTCTTCAGTACCACCAGTATAGTTAGCGTAAAATATTTA
GTATTCCAGTATACTGTACTGAGAACACCTTTGAAATATTTCACCCATCG
GACAAGTTCGAATAATTGGCGTATTTCGCCACGAAAAGTACACAATTTTT
GGCTGAGCAGAATGAGCGGACACATGAAATAAAGTAGCCACCCCTGTCCA
TCCAATTTAAGAACACATGAGCTCATTCTGAAACTCTGGCGAATATTTTT
TAATTTTCGTGGCGAATACGCGAAGTATTTGTAAGTGTCGGCGGCGTGAA
ATATTTCACGAATAAACACGAGAAATCTGGAATGACTACTGTATCTGTTC
GAGTTGGGGTAGATGTCCATGTGACGCGAATAATATGCATTGTACTCGAT
ATACCATGGATCATCGAAAAGCTCGAGTAGATAAGAGTATTTAATCTTGT
ACAGTACCATCCAGGAAATAATCAGGACCTACATGTATGACTGTTCGCCG
GGTATACAACCACCTAGTTACCATCTGTAGAGTGACCATTCATAGACTTG
TAAACGAATAGATACGTATCCACCCAAGACAAATAATGATAGTTCGAGAT
AGTTGCGAATGCTCCTTTCGTATTTGTCCGGGGGGTGAAATATGTTAAAG
TCGACTTTCGACACGCGTGCACTGTACAGAAAGAGAGAAACATAATGGAG
ATACTGGCGAGATTTCTCCAAAGATATGGCTGTGCTGTGTGAAATCTCTG
CACCAGCGGGTGATATACACACATACTCTTGTAAAAGTGCGGTAATCAAC
AATCTCCGAGACTTCCGAGACTCCGACCGCGATGCAAACTTATGTTCGCA
ACTCTTGATCCCTTTGTCATACTCTACTCTACTCTACTGCTCCACCTCCG
CCGAAACGTGACAAACTCAGGAGGCGACGGATGGAAGACCTCCTGCGGGG
GCCGACGGCTGTCGCGCCTTCCCTTCAACCGTACGTGGCTGGCGCGGGGG
CGGTCGAGACGGGACTGTATCGCTTCCTTTCTCCTATCACCATACAGGAT
CTGGAGAGACCGCCGACGGCGGACCATGGCGCTAGGCCGGGCGGAGAGGG
AGGCGCGGCGGCGGGAGCTGGAGGTGGCGGCGGGGGGGCCACGGTGCCGT
TGTGAGTTTTTTGGCGTGTGTGCATGCGGCGGAATTCATCGAAGATATAT
TTTAGTCGTTGTTGTCTTGTTTGGTGTTCGTGTTGATGTAGGTGTTCTCA
TTGTTGATGTTATATATTGTCATCGTTGGTGGTGATGTTGGTCAGTGTTT
CGTATCTGTGCCTTTCGTTGATGAAACGTTAGCTTTCCCCCAACTGCGCC
TGACAAGGAATATCCGATTTCTGTTTTTTCATATTGTTGTAATAGATGAC
GTCAACGCCCTCTGCTTTTTTTCCATTTGAAAAAATGAGAGTGTGAAGGG
CTGGGCATCGGGCTTGGAGTTGGCCCCTGCTCCCTCTTGCCGGTACGGTC
GGCAGAGCTTTATTTTGTCGAAAAGAGTTACTGTTATCGTCCCAGATTTT
GACACCTTGAATCACCCTTCACCCATCGCACTAAACTTACCGAATGTACG
CCGTCGTGTAATATTATTCGCCTCCACAGGAACGCCAACTCTGCAGCTTC
GACCACCGCTGCCACAGCGGCCGCCGCCGCTGCGGCGGTCCTCCCGCCCA
ACTGGTACCGAGCCGGCAGAGGAGTGGACGATTTACTCAACGAAGCGGAA
GGCCTCGACTGGCTGGCCGACAGCGGCGGGGCTGGCGGCCCCGCCGCTGC
GGCACAAGCAGCGGCTGCGGCCGCGGCGGCTGCTCGTCCAACTGCGTCTT
CACGGCCGCCGGGCGTACCGGGTGGGACAGCCCAGGTTACTGCTTCAGGT
GATCCCATCAGCGTCACAATCGCCGCCGCCGTCGCCGGTGATCTGGGGAA
ACGACCGACGGCCATCTCTGGAGCAGCAGCAACTGCAGCAGCAGCGTCGA
ACTCTCCTGGAATGTCATCATCACCGTCTTCAGTACACCACCCAAATAAC
AAGAACAACAAGAACAACAACAGCAACAACCAGCCGTCCCTGAAAAGGGC
GCGTTCGAATGGATCCCCTCCTGCGGGAGTCTTGCCGGCTGGTCCCGCCG
CCACTGCCTCCCCCGGCGCGTCTACGACGGCAAATCTCTCGCCGGTAGCC
CCGTCTGGCTCGTCGGCGACGGCGGGCGGCACTGGCGGGGGCAGCGGCGT
TTCCCGAGCCCCTTCCCCACATAGTTCAGCGGCAGCCGCAGGCGGACCGC
CCGGTGCCGTGGCCGAATCTATCTCAGCGGCGACGGCGGACGGCAAGCAA
CCCCCAGGCCGTCCATCGCTGTCCCACCAACCTCATCAGCTCTCAACACG
CACGACTACTGCCCCGGGTGTTGTGGAAGGAACAGCAGCAGCAGCAGCTG
CTGCTGGCGCTACCGTGGCATCTCGAAGACCGACACCGCCGCTTGCGAGC
GCCGATGGCGCTCCCCCGACTCAGCAGCCTCGTAGGGGAGGTAATACCGG
CGACAGTCGATCGGTTGTTCCGCCGCCGGCAGCAACCGGAGGAATTGAAT
CGGCTGCCTCCAATACGGCAGGAGGTGCCGGGGGTCTCGTGGCTGCTATG
GCTCGTGCCACGATTGCAACGCCATCAACCGCGGCGGCGGCGTTGCTGCT
TTCACATCAAAATTCTACCGCCCAGCGACAGGCAGAGACGGCCATCAGCC
CTAGCAGTGCCCCGCTCTTGGTGATGCCGATGCCACACGCGGCAAATGGT
GAAGGGTGTACTGTGGTGGCGGCTGCGGCAGCGGCCGCCGGCGAACCGAC
CTCTCCGATAGGGCCACTGGGGAGCGTAGAATTGAGTACGAGCGGGTTGC
AAGGGTCCGATGAGGAGGGACATCTGTCAGGGTTGTCGGACTTGGAAGGC
CTGATGGAAGACCAGGTAAACCTGAAATAA
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Coding sequence (CDS) from alignment at H-paniculata_contig13598:292..5721-

>mRNA_H-paniculata_contig13598.2220.1 ID=mRNA_H-paniculata_contig13598.2220.1|Name=mRNA_H-paniculata_contig13598.2220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3630bp|location=Sequence derived from alignment at H-paniculata_contig13598:292..5721- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAATACCGGACGATGGACCTACGACGAGCACCGGCTGTTCCTGCGAGG
GCTAGAGCTTCACGGCAAGGGGTGGAAGAAGATCGCAAGTCTGATCAAGA
CGCGCACTGTGGTACAGATCCGCACGCACGCTCAGAAGTACTTCCAGAAG
ATTCAGAAGGCGAAGTTGAACGGCGACCACGGGGAGGTGGCGATGGACGC
CAAGGGGAAGTCGGCGCGGAGGAAGAGCCGAGGCAGAATACCGGACGATG
GACCTACGACGAGCACCGGCTGTTCCTGCGAGGGCTAGAGCTTCACGGCA
AGGGGTGGAAGAAGATCGCAAGTCTGATCAAGACGCGCACTGTGGTACAG
ATCCGCACGCACGCTCAGAAGTACTTCCAGAAGATTCAGAAGGCGAAGTT
GAACGGCGACCACGGGGAGGTGGCGATGGACGCCAAGGGGAAGTCGGCGC
GGAGGAAGAGCCGAGGGAGGCGACGGATGGAAGACCTCCTGCGGGGGCCG
ACGGCTGTCGCGCCTTCCCTTCAACCGTACGTGGCTGGCGCGGGGGCGGT
CGAGACGGGACTGTATCGCTTCCTTTCTCCTATCACCATACAGGATCTGG
AGAGACCGCCGACGGCGGACCATGGCGCTAGGCCGGGCGGAGAGGGAGGC
GCGGCGGCGGGAGCTGGAGGTGGCGGCGGGGGGGCCACGGTGCCGTTGAG
GCGACGGATGGAAGACCTCCTGCGGGGGCCGACGGCTGTCGCGCCTTCCC
TTCAACCGTACGTGGCTGGCGCGGGGGCGGTCGAGACGGGACTGTATCGC
TTCCTTTCTCCTATCACCATACAGGATCTGGAGAGACCGCCGACGGCGGA
CCATGGCGCTAGGCCGGGCGGAGAGGGAGGCGCGGCGGCGGGAGCTGGAG
GTGGCGGCGGGGGGGCCACGGTGCCGTTGAACGCCAACTCTGCAGCTTCG
ACCACCGCTGCCACAGCGGCCGCCGCCGCTGCGGCGGTCCTCCCGCCCAA
CTGGTACCGAGCCGGCAGAGGAGTGGACGATTTACTCAACGAAGCGGAAG
GCCTCGACTGGCTGGCCGACAGCGGCGGGGCTGGCGGCCCCGCCGCTGCG
GCACAAGCAGCGGCTGCGGCCGCGGCGGCTGCTCGTCCAACTGCGTCTTC
ACGGCCGCCGGGCGTACCGGGTGGGACAGCCCAGGTTACTGCTTCAGGTG
ATCCCATCAGCGTCACAATCGCCGCCGCCGTCGCCGGTGATCTGGGGAAA
CGACCGACGGCCATCTCTGGAGCAGCAGCAACTGCAGCAGCAGCGTCGAA
CTCTCCTGGAATGTCATCATCACCGTCTTCAGTACACCACCCAAATAACA
AGAACAACAAGAACAACAACAGCAACAACCAGCCGTCCCTGAAAAGGGCG
CGTTCGAATGGATCCCCTCCTGCGGGAGTCTTGCCGGCTGGTCCCGCCGC
CACTGCCTCCCCCGGCGCGTCTACGACGGCAAATCTCTCGCCGGTAGCCC
CGTCTGGCTCGTCGGCGACGGCGGGCGGCACTGGCGGGGGCAGCGGCGTT
TCCCGAGCCCCTTCCCCACATAGTTCAGCGGCAGCCGCAGGCGGACCGCC
CGGTGCCGTGGCCGAATCTATCTCAGCGGCGACGGCGGACGGCAAGCAAC
CCCCAGGCCGTCCATCGCTGTCCCACCAACCTCATCAGCTCTCAACACGC
ACGACTACTGCCCCGGGTGTTGTGGAAGGAACAGCAGCAGCAGCAGCTGC
TGCTGGCGCTACCGTGGCATCTCGAAGACCGACACCGCCGCTTGCGAGCG
CCGATGGCGCTCCCCCGACTCAGCAGCCTCGTAGGGGAGGTAATACCGGC
GACAGTCGATCGGTTGTTCCGCCGCCGGCAGCAACCGGAGGAATTGAATC
GGCTGCCTCCAATACGGCAGGAGGTGCCGGGGGTCTCGTGGCTGCTATGG
CTCGTGCCACGATTGCAACGCCATCAACCGCGGCGGCGGCGTTGCTGCTT
TCACATCAAAATTCTACCGCCCAGCGACAGGCAGAGACGGCCATCAGCCC
TAGCAGTGCCCCGCTCTTGGTGATGCCGATGCCACACGCGGCAAATGGTG
AAGGGTGTACTGTGGTGGCGGCTGCGGCAGCGGCCGCCGGCGAACCGACC
TCTCCGATAGGGCCACTGGGGAGCGTAGAATTGAGTACGAGCGGGTTGCA
AGGGTCCGATGAGGAGGGACATCTGTCAGGGTTGTCGGACTTGGAAGGCC
TGATGGAAGACCAGGTAAACCTGAAATAAGAACGCCAACTCTGCAGCTTC
GACCACCGCTGCCACAGCGGCCGCCGCCGCTGCGGCGGTCCTCCCGCCCA
ACTGGTACCGAGCCGGCAGAGGAGTGGACGATTTACTCAACGAAGCGGAA
GGCCTCGACTGGCTGGCCGACAGCGGCGGGGCTGGCGGCCCCGCCGCTGC
GGCACAAGCAGCGGCTGCGGCCGCGGCGGCTGCTCGTCCAACTGCGTCTT
CACGGCCGCCGGGCGTACCGGGTGGGACAGCCCAGGTTACTGCTTCAGGT
GATCCCATCAGCGTCACAATCGCCGCCGCCGTCGCCGGTGATCTGGGGAA
ACGACCGACGGCCATCTCTGGAGCAGCAGCAACTGCAGCAGCAGCGTCGA
ACTCTCCTGGAATGTCATCATCACCGTCTTCAGTACACCACCCAAATAAC
AAGAACAACAAGAACAACAACAGCAACAACCAGCCGTCCCTGAAAAGGGC
GCGTTCGAATGGATCCCCTCCTGCGGGAGTCTTGCCGGCTGGTCCCGCCG
CCACTGCCTCCCCCGGCGCGTCTACGACGGCAAATCTCTCGCCGGTAGCC
CCGTCTGGCTCGTCGGCGACGGCGGGCGGCACTGGCGGGGGCAGCGGCGT
TTCCCGAGCCCCTTCCCCACATAGTTCAGCGGCAGCCGCAGGCGGACCGC
CCGGTGCCGTGGCCGAATCTATCTCAGCGGCGACGGCGGACGGCAAGCAA
CCCCCAGGCCGTCCATCGCTGTCCCACCAACCTCATCAGCTCTCAACACG
CACGACTACTGCCCCGGGTGTTGTGGAAGGAACAGCAGCAGCAGCAGCTG
CTGCTGGCGCTACCGTGGCATCTCGAAGACCGACACCGCCGCTTGCGAGC
GCCGATGGCGCTCCCCCGACTCAGCAGCCTCGTAGGGGAGGTAATACCGG
CGACAGTCGATCGGTTGTTCCGCCGCCGGCAGCAACCGGAGGAATTGAAT
CGGCTGCCTCCAATACGGCAGGAGGTGCCGGGGGTCTCGTGGCTGCTATG
GCTCGTGCCACGATTGCAACGCCATCAACCGCGGCGGCGGCGTTGCTGCT
TTCACATCAAAATTCTACCGCCCAGCGACAGGCAGAGACGGCCATCAGCC
CTAGCAGTGCCCCGCTCTTGGTGATGCCGATGCCACACGCGGCAAATGGT
GAAGGGTGTACTGTGGTGGCGGCTGCGGCAGCGGCCGCCGGCGAACCGAC
CTCTCCGATAGGGCCACTGGGGAGCGTAGAATTGAGTACGAGCGGGTTGC
AAGGGTCCGATGAGGAGGGACATCTGTCAGGGTTGTCGGACTTGGAAGGC
CTGATGGAAGACCAGGTAAACCTGAAATAA
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