mRNA_H-paniculata_contig1359.2216.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1359.2216.1
Unique NamemRNA_H-paniculata_contig1359.2216.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 3.490e-80
Identity = 208/398 (52.26%), Postives = 250/398 (62.81%), Query Frame = 3 
Query:  147 MAENVRDEAESADSGLASINIKFTSSDRAAGKVEISLDATISELKQSIRTKFDVEPKRLIFQGRILKTDEQTVAECKLKDGLTVVVQA-SPASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAFAQAVAERIEHTTATHRSSGPVGEAVATIRGQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFTEIDGAEGSWLLQPNAAAWTVLTSGRSEIESALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAFATTGGNMGGMDGGMGMGMPDMDMMQRLMQNPAALQGAMNDPSIQAMLGPEMAGQ--MRTMMANPGFMSQAMSTIRNNPDMVASYAQGLARNPSPSALQRA 1331
            MAE    +A SA S  A+I +KFTSSD+AAG+V ISL+ T+ ELK +IR++FDVEPKR+IFQGRIL  D+QT+ +CKLKDGLTVVVQ  +P +S XXXXXXXXXXXXXXXXXXXX               AA   A  + +        SS PVG+AVAT+  Q   +ARECLTTL K++DNI +HP E+KYRKIKR NAGF RKVGAV GGEACMRALGF E   A+ SWLL P+ AAW VLT+GR +I+ AL  LP A A           +GAS    T GFAGG+GV+PP  AF   G   GG  GG GM  PDM  M R+ QNPA +QG                    M+++MA PG ++QA   I+NNP M             P+ALQRA
Sbjct:    1 MAEGA--DAVSAASATATIGVKFTSSDKAAGQVSISLEGTVGELKGAIRSQFDVEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVVQVLAPGASPXXXXXXXXXXXXXXXXXXXXSPATPNP--------AAGLAAATQSMSGLXXXAVSSSPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAA----------AGAS----TGGFAGGLGVLPPPGAFPQAG--FGGGTGGGGM--PDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAM---XXXXXXXXXXPTALQRA 367
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A7S2CJQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJQ0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.030e-15
Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 3 
Query:  603 VGEAVAT------------IRGQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFTEIDGAEGSWLLQPNAAAWTVLTSGRSEIESALFLL 914
            VG A+AT            + G     A+  L TL KIVDNI  +P E+KYRKIK++NA F RK+G + GG  C+ ALGFT  D  EGSW L+    AW  LT+ ++ IE  +  L
Sbjct:   28 VGSAIATXXXXMATAMASLVSGNAAPTAKVGLETLVKIVDNIAKNPGEEKYRKIKQSNATFNRKIGGLPGGRECILALGFT--DDGEGSWTLEATGPAWENLTACKAAIEPTIVAL 141
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.950e-13
Identity = 75/258 (29.07%), Postives = 124/258 (48.06%), Query Frame = 3 
Query:  591 SSGPVGEAVATIR-GQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGF-TEIDGAEGS--WLLQPNAAAWTVLTSGRSEIESALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAFATTGGNMGGMDGGMGMGMPD----MDMMQRLMQNPAALQGAMNDPSIQAML--GPEMAGQMRTMMANPGFMSQAMSTIRNNPDMVASYAQGLARNPSPSAL-QRA 1331
            +S P+G A+  +R G   ++    + TL K++ NI+SHPME+KYR++K+ N  F++++G + GG  CM A GF  E+D  E +  + L   A +W  L   ++ +E A+                     A+G R  P  A G   + P   F   G            G+P+     D + R+M +P ALQ A+ +P +Q M+   P ++  +R          Q +  + NNP M+   A+ + R+P+  A+ QRA
Sbjct:  144 ASDPLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVA------------------KAAAGDRQQPVQAPGPAGLLPGGGFPPPG------------GLPNDPALRDSVSRMMSDPRALQAALQNPMLQQMIRSDPSVSPMLR----------QHLEQLSNNPAMLQQMARQM-RDPATMAMFQRA 360
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: B8C198_THAPS (Ubiquitin-like domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C198_THAPS)

HSP 1 Score: 84.7 bits (208), Expect = 2.230e-13
Identity = 86/253 (33.99%), Postives = 130/253 (51.38%), Query Frame = 3 
Query:  171 AESADSGLASINIKFTSSDRAAGKVEISLDAT--ISELKQ--SIRTKFDVEPKRLIFQGRIL--KTDEQTVAECKLKDGLTVVVQASPASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAFAQAVAERIEHTTATHRSSGPVGEAVATIR-GQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFT-EIDGAEGSWLLQPNAAAWTVLTSGRSEIESAL 905
            ++S D+   ++ +  TSS  +A ++ ++L  T   S L++  S  T   ++  +LIF+GR++  K++     E KL+D   + V   P  +AXXXXXXXXXXXX                          A A       T AT  +S P+  A+ T+R        R  L T  K++ NI+SHPME+KYR IK++N  F +++G V GGEA + A GF  E  G   S++L+P+A AW  L +   EI+  L
Sbjct:    2 SDSQDNKSLTLYLSLTSSP-SAPRIPLTLPPTSNASTLRRLASAATNIPLDSLKLIFRGRVIGEKSEGDVGLEYKLEDESVIHVMGKPPVAAXXXXXXXXXXXXGTN----------------------IAGASVSMNSSTPATSNTSSPLASAMLTLRTNNNSETYRTALATADKLLSNIISHPMEEKYRSIKKSNPAFHKRLGGVSGGEALLLASGFVVESGGGVESYVLRPSADAWPRLVAAGEEIQRVL 231
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A836CLK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.710e-12
Identity = 65/200 (32.50%), Postives = 88/200 (44.00%), Query Frame = 3 
Query:  678 IVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFTEIDGAEGSWLLQPNAAAWTVLTSGRSEIESALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAF----ATTGGNMGGMDGGMGMGMPDMDMMQRLMQNPAALQGAMNDPSIQAMLGPEMAGQMRTMMANPGFMSQAMSTIRNNP 1265
            + DNI++HP+E+KYR IK++N  F  +VG V GG A ++ALGFT+      +W+L P+A AW  L  GR  ++S L  L                    GT A P                   A   G MGGM+  MG  M D  M+QR                        MA QM+ +  NP  M Q MS +++NP
Sbjct:  201 VADNIINHPLEEKYRSIKKSNKSFAARVGNVPGGAAAIQALGFTDSPTVPDTWVLLPSADAWPTLRQGRDLLQSTLSSL--------------------GTAAPPXXXXXXXXXXXXXXXXXXRAGGAGAMGGMEAAMGAAMRDPAMLQRXXXXXXXXXXXXXXXX--------MAAQMQALAQNPAMMQQMMSAMQSNP 372
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A1Z5JL72_FISSO (Ubiquitin-like domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JL72_FISSO)

HSP 1 Score: 80.9 bits (198), Expect = 2.430e-12
Identity = 106/373 (28.42%), Postives = 169/373 (45.31%), Query Frame = 3 
Query:  201 INIKFTSSDRAAGKVEISLDATIS--ELKQSIR--TKFDVEPKRLIFQGRILKTDEQ--TVAECKLKDGLTVVVQASPASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAFAQAVAERIEHT-------TATHRSSGPVGEAVATIR-GQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGF-TEIDGAEGSWLLQPNAAAWTVLTSGRSEIESALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAFATTGGNMGGMDGGMGMGMPDMDMMQR-LMQNPAALQGAMNDPSIQAML--GPEMAGQ--MRTMMANPGFMSQAMSTIRN 1259
            +++  T +D  A KV ++++ +++  +L+Q     TK  +E  +LIF+GR++  ++    V+E KL+DG  +     PA +A        XXXXXXXXX                  +A A   A R+          +A   ++ P+  A+AT+R G   A     + TL+KI+ NI++ PME+KYR +K++NA F+RK+G  RGG+  M+A GF  EI      + LQ +A AW  L +    +++ +             R A   S A      P   G    MP    F                   + D +    M NP ALQG + DP +Q M+   P +     M  M+ NP  + Q    +++
Sbjct:    6 VHLTITGAD-GAPKVPLTIEPSVTSTQLRQQAAEATKIPIESLKLIFRGRLISNNDTQLAVSEFKLEDGSVLHCMGKPAPAASSAEGGVSXXXXXXXXXLA----------------SASAAQPASRLSFNAFPSASVSAPAPTADPLQAALATLRAGLSQADYLTAVQTLEKILSNIVTQPMEEKYRSLKKSNAAFQRKLGGKRGGDELMKAAGFIVEIREGVEYYALQASAEAWPKLVATHGILQAVV-------------RQAQAISAAPAPPPVPPTIGSSSNMP----F-------------------NFDQIPSDFMSNPVALQGMLQDPMVQNMIRNDPRLRDSPYMEQMLNNPALLRQVSQAMQD 325
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A1Z5J6X8_FISSO (Ubiquitin-like domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6X8_FISSO)

HSP 1 Score: 80.5 bits (197), Expect = 3.210e-12
Identity = 99/368 (26.90%), Postives = 158/368 (42.93%), Query Frame = 3 
Query:  201 INIKFTSSDRAAGKVEISLDATIS--ELKQSIR--TKFDVEPKRLIFQGRILKTDEQ--TVAECKLKDGLTVVVQASPASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAFAQAVAERIEHTTATHRSSGPVGEAVATIR-GQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGF-TEI-DGAEGSWLLQPNAAAWTVLTSGRSEIESALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAFATTGGNMGGMDGGMGMGMP-DMDMMQR-LMQNPAALQGAMNDPSIQAML--GPEMAGQ--MRTMMANPGFMSQAMSTIRN 1259
            I +  T +D  A KV ++++ +I+  +L+Q +   TK  +E  +LIF+GRI+  ++    V+E KL+DG  +     PA +A                                    AF  A     + T      + P+  A+AT+R G   A     + TL+KIV NI++ PME+KYR +K++N  F+RK+G  RGG+  M+A GF  E  DG E  + LQ +A AW  L +    +++ +    A +A  T +                        +PP                G    +P + D +    M NPAALQ  + DP +Q M+   P       M  M+ NP  + Q    +++
Sbjct:    6 IQLTITGTD-GAPKVPLTIEPSITSTQLRQQVAEATKIPLETLKLIFRGRIIANNDTQLAVSEFKLEDGSVLHCMGKPAPAASTAEGAASSQTATTSNVASAAAALPASRLSFN----AFPSASVSVPDST------ADPLQAALATLRAGLSPADYLTAVQTLEKIVSNIVTQPMEEKYRSLKKSNVAFQRKLGGKRGGDELMKAAGFIVEFRDGME-YYALQASAEAWPKLVATHGTLQAVVRQAQALSAAPTPS-----------------------PVPPTM--------------GSSPNLPFNFDQIPSDFMSNPAALQAMLQDPMVQNMIRNDPRFRNNPYMEQMLNNPALLQQVSQAMQD 324
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A7S2JSB3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSB3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.350e-10
Identity = 66/224 (29.46%), Postives = 120/224 (53.57%), Query Frame = 3 
Query:  243 VEISLDATISELKQSI--RTKFDVEPKRLIFQGRILKTDEQTVAECKLKDGLTVVVQASPASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAFAQAVAERIEHTTATHRSSGPVGEAVATIRGQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFTE--IDGAEGSWLLQPNAAAWTVLTSGRSEIESA 902
            +E+  DA+  +L++ +   TK  ++  ++I++GR+++  E  V++ KL++   +     P SS                   XXXXXXXXXXX                 E +T+T+ S+  V ++    R  +    +  L+TL K+V+N++SHP E+KYRK+K++N  F+R++G + G +  M + GF E  ++G    +L++P+A AW  L   +S +++A
Sbjct:   18 IELPEDASADKLRELVAEETKIPLDKLKIIYRGRMIQKSENVVSDFKLEEDSVLHCMGKPLSSTSTASAADDATDAATNPTPXXXXXXXXXXXDCTN-------------ESSTSTNFST--VIQSGEMKRSVDATTFQTALSTLLKLVNNVISHPNEEKYRKVKQSNGAFQRRLGGLTGAKELMFSAGFVEETVEGDGLVYLMKPSAEAWPKLLQTQSALQAA 226
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A7S2EXK5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXK5_TRICV)

HSP 1 Score: 75.5 bits (184), Expect = 2.290e-10
Identity = 97/246 (39.43%), Postives = 139/246 (56.50%), Query Frame = 3 
Query:  201 INIKFTSSDRAAGKVEISL--DATISELKQSIR--TKFDVEPKRLIFQGRILK-TDEQTVAECKLKDGLTVVVQASPASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAFAQAVAERIEHTTATHRSSGPVGEAVATIRGQ-EVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFT-----EIDGAEGSWLLQPNAAAWTVLTSGRSEIESAL 905
            I++  TS+  +A +V +S+  D T  +L+ S    +K  +   +LIF+GR++  +D   V E K+++G  V     P +SA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    +S P+  A+ TIR +   A  +  L TL K++ N+ SHPME+KYR++K+ NA F+R++G + GG   M A GFT       D  E  + L P+A AW  L + +  + +AL
Sbjct:   52 IHLNLTSAP-SAPRVTLSIPKDVTAKQLRASAAEASKIPLSSLKLIFRGRLIADSDRVAVDEFKIEEGCVVHCMGKPVASAEGSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-------------ASDPLPAALGTIRSRCTPAQYKTALQTLDKLLGNVKSHPMEEKYRRVKKGNAAFQRRLGGLPGGHDAMLAAGFTVEQECSGDACEEIYSLTPSADAWPKLVAAKDAVATAL 283
[Close]
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Match: A0A1E7F4F6_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4F6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.760e-10
Identity = 71/249 (28.51%), Postives = 111/249 (44.58%), Query Frame = 3 
Query:  660 LTTLKKIVDNILSHPMEDKYRKIKRTNAGFKRKVGAVRGGEACMRALGFT---EIDGAEGSWLLQPNAAAWTVLTSGRSEIESALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAFATTGGNMGGMDGGMGMGM------------------------PDM-DMMQRLMQNPAALQGAMNDPSIQAML--GPEMAG----QMRTMMANPGFMSQAMSTIRNNPDMVASYAQGLARN 1304
            +TTL++++ NI+ HPME+KYR++K+ NA F +++G + GG  CM A GFT   +   +E  + LQ  A  WT LT    +I     ++ A+       + A                       P+++    G  +GG+  G G G                         P+M +MM ++MQNP AL  A+ +P IQ M+   P +      QM  M  NP  + Q M+    +P + A   Q +A N
Sbjct:  186 VTTLERVLKNIIDHPMEEKYRQVKKQNAAFNKRLGGLIGGHDCMLATGFTVDNDTSSSEEVYKLQATAQKWTYLTEKAQQI-----VIDASQQAKLQQQQAX---------------------XPSSSSLPVGVGVGGVPAGGGNGXXXXMMPXXXXXXXXXXXXXXXXXDPNMQNMMSQMMQNPEALATALQNPMIQQMMQXXPNIXXXXXQQMEAMSNNPAMLQQ-MTQRMQDPTVQAQLRQAMAAN 407
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1359.2216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX4_ECTSI3.490e-8052.26Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A7S2CJQ0_9STRA4.030e-1543.97Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A448ZQX1_9STRA1.950e-1329.07Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
B8C198_THAPS2.230e-1333.99Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
A0A836CLK8_9STRA1.710e-1232.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5JL72_FISSO2.430e-1228.42Ubiquitin-like domain-containing protein n=1 Tax=F... [more]
A0A1Z5J6X8_FISSO3.210e-1226.90Ubiquitin-like domain-containing protein n=1 Tax=F... [more]
A0A7S2JSB3_9STRA1.350e-1029.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2EXK5_TRICV2.290e-1039.43Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7F4F6_9STRA4.760e-1028.51Ubiquitin-like domain-containing protein n=1 Tax=F... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1359contigH-paniculata_contig1359:1261..9628 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.6
Seed ortholog evalue7.7e-73
Seed eggNOG ortholog2880.D8LAX4
KEGG koko:K04523
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0016043,GO:0019538,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0030433,GO:0030474,GO:0030674,GO:0031023,GO:0032446,GO:0033554,GO:0034976,GO:0036211,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051300,GO:0051603,GO:0051716,GO:0060090,GO:0070647,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0010@2759
Ec32 ortholog descriptionPUG domain
Ec32 orthologEc-27_006090.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03051,ko04131
Exons4
Model size2798
Cds size1590
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1359.2216.1prot_H-paniculata_contig1359.2216.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1359 2323..9482 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.933007-UTR-H-paniculata_contig1359:1260..23221622929074.933007-UTR-H-paniculata_contig1359:1260..2322Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1359 1261..2322 -
1691480722.174811-UTR-H-paniculata_contig1359:1260..23221691480722.174811-UTR-H-paniculata_contig1359:1260..2322Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1359 1261..2322 -
1622929075.2345243-UTR-H-paniculata_contig1359:9482..96281622929075.2345243-UTR-H-paniculata_contig1359:9482..9628Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1359 9483..9628 -
1691480722.2230263-UTR-H-paniculata_contig1359:9482..96281691480722.2230263-UTR-H-paniculata_contig1359:9482..9628Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1359 9483..9628 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929075.0436203-CDS-H-paniculata_contig1359:2322..28531622929075.0436203-CDS-H-paniculata_contig1359:2322..2853Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 2323..2853 -
1691480722.185713-CDS-H-paniculata_contig1359:2322..28531691480722.185713-CDS-H-paniculata_contig1359:2322..2853Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 2323..2853 -
1622929075.0537543-CDS-H-paniculata_contig1359:4344..47911622929075.0537543-CDS-H-paniculata_contig1359:4344..4791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 4345..4791 -
1691480722.1941392-CDS-H-paniculata_contig1359:4344..47911691480722.1941392-CDS-H-paniculata_contig1359:4344..4791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 4345..4791 -
1622929075.2136848-CDS-H-paniculata_contig1359:5700..61661622929075.2136848-CDS-H-paniculata_contig1359:5700..6166Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 5701..6166 -
1691480722.2033079-CDS-H-paniculata_contig1359:5700..61661691480722.2033079-CDS-H-paniculata_contig1359:5700..6166Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 5701..6166 -
1622929075.2242866-CDS-H-paniculata_contig1359:9336..94821622929075.2242866-CDS-H-paniculata_contig1359:9336..9482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 9337..9482 -
1691480722.214754-CDS-H-paniculata_contig1359:9336..94821691480722.214754-CDS-H-paniculata_contig1359:9336..9482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1359 9337..9482 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1359.2216.1

>prot_H-paniculata_contig1359.2216.1 ID=prot_H-paniculata_contig1359.2216.1|Name=mRNA_H-paniculata_contig1359.2216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=530bp
MAENVRDEAESADSGLASINIKFTSSDRAAGKVEISLDATISELKQSIRT
KFDVEPKRLIFQGRILKTDEQTVAECKLKDGLTVVVQASPASSAVAATQA
MPSPTATTAASAGVAGVSAAPTATTAASHAAFAQAVAERIEHTTATHRSS
GPVGEAVATIRGQEVALARECLTTLKKIVDNILSHPMEDKYRKIKRTNAG
FKRKVGAVRGGEACMRALGFTEIDGAEGSWLLQPNAAAWTVLTSGRSEIE
SALFLLPAAAATDTATRTAMGTSGASGTRATPGFAGGMGVMPPATAFATT
GGNMGGMDGGMGMGMPDMDMMQRLMQNPAALQGAMNDPSIQAMLGPEMAG
QMRTMMANPGFMSQAMSTIRNNPDMVASYAQGLARNPSPSALQRAGLQLG
ADMQGNIGGGGAGTNPTGGGFPPAPAPTMGGSAVPGPRALAAEPPVARTQ
TPSAAEPPVARTQTPSAAEPPVARTQTPPAVDPPAARTRRPAAGPGATGA
AGEESRTEQAEQGWDELLAETLRRSMEDH*
back to top

mRNA from alignment at H-paniculata_contig1359:1261..9628-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1359.2216.1 ID=mRNA_H-paniculata_contig1359.2216.1|Name=mRNA_H-paniculata_contig1359.2216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8368bp|location=Sequence derived from alignment at H-paniculata_contig1359:1261..9628- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATAATGGCTCTCCTTGCACAAGTCAATGGTAAACTATGACGGTAGAAT
TTACTGTACACGACAAACCTCATCAACGTGTTTCGCATGTCATACACGTC
TGTTGCGTCACTTTAATAAGCCCTTGACGAAGTGCATACAGCAGTCATGG
CAGAAAACGTACGCGATGAAGCAGAGAGCGCTGATTCTGGCCTGGCCAGC
ATCAACATCAAATTTACTTCTTCGGACAGGGCAGCTGGCAAGGTGGAAAT
CTCTCTTGATGCCACGATCAGCGAACTGAAACAGTCCATAAGGTAAAACC
GGTCTATCATCTACAAAGTCGAACCTCGATTCTTCCGTCGGTATACTGCT
CTACGGTATGGCGTGCTGTCTGCAGCAGTCGGGGCTGGTCCTCTGTGCGA
TGCAAACTGTACCTTCAGCCTCGAGTTTGTGTTTGGATGTATATGGATTT
TTTTGTCACCTGCTACTTATTCGACCGTAAATAGACAGTAACTGGAAAAT
ACTCGAGGAGGAAAATTGGGTCAAGGTTTCCGCGGGTTGGTTTTCGGCTT
CGAGGGTGGGTTGGGGAGGTTGTGTAACCGTTTGTACAGAGAGTATCTTG
AATATGGGGGAGGGTGGAGAGGACAGAGTGTGAATGCTCGAATGTCATTG
TGAAAATTAGGAGGATGAGTGCTACAGTTTATTCTTCGTGTACTATCTGT
CCAGCGAGGTTCGAACCCGCGACTTGCGGAACTCAGTTCACTGATTAGCC
CACTTCACCAAAATATCAGCTTACCCACAAAGGTACCGCCATTCTTTGTG
TTTGGTGTCTAGCCGCCTTGTCCCATCGCTCGCTCTAGACCGCTTTGGGG
CAGCTTACGCACCAGTGTCTGTGAGCCTCTCAGAGCATGCCCCCTGATGC
TTTCTCAAGTCTGTCTCTACAGAGTTTTCACACGTTTCTGATTTAAAAAT
ACGATGAAGGCAAAGGGCACTCGAAGTATGCGACACTGCAATTCTTGGTG
AGCTCGAAGAGTCCAACAGAGCTGTAAAGGGTCGAGAAGATAAGTCACGT
CACCAAGATGGGAAGCGCCACGGCTGTGGCTGATGTCGTCTGATAAAAAG
CCGCACAACCCACGCCATGAGAATGCCAGTCACGTATGCAAAGAGTCTGC
TCCAATCGTCTTTCCCTCTGGCAAGCTTTGATGTGTGCTGTCCTGTTCAG
CTGGGGCGTAAAACAGCACGTTTTGTTCGAGAAGCGGGCGGTTGACTCCT
GATTTTTTTTATGTTTCCCAAAACCGAATATTCAACTCCAAGAATCGAAC
TTTCATCACAGGCAGCTTGTATAACTCGAAGTAATAAAACAGTAGTTATT
CCGCACGACGACGGTGGGGTGGGTGGCATGTCCCGGAAAGTCTACTCATC
TGAAGGGAACGCAACAGTTGTGATGGGTACGGTTTTAATCAACCCTTCCT
GGGCTCCGATCTCAACAGAATCCCCCACCTGTAATCCGTACCTAACTAAA
TAGGAGAAAACAACTTTTCATGGCAAGATTGCGTTGCGTCCCTCTCAGAT
AGCCAGCCCAGTATATGCATCATATGCCTCACAGAACGGAAGCTGACATG
GTTCTACGCATGGCGATTACAGTGATAGATATGTCATGTTCATGTTTTGT
TGCGAAGAACCCGGCAATCGAACAACTCTGTTCTGTTAAAGGAAATGTAG
ACATGTTTGGGCGAATGCCTGAATGTGGAAGCAGCGGAAAAGGGTTTTGC
CTTAGCCTTTCGGGGGTTAAAAAACCCCAAAAAATCCTGGCAATCGATCC
GATTCTCCGCTATGGCCGTGCATTAAACCTTGGGAAACCGGACTTCGTAA
CGACCAAAAGATAGACTTGCTAACGATCACTTGTGAGCAATGACGAATAC
GGCGAATGAACTAGCTCTGGGTAGCTAGTTGGTGCACTTCAGGATCAAAT
AACCGGTCTCTTTTTTATCTATCTAAGGCCCATGTCTTAGATTTTGTTAG
ACCCAGAAAGGGCTAACATGGGCTTTGCTCATAACATTGAAATAATACAA
AAGCACTCCACAGATGATCGGGGGTTCCAAAATTCCCAAAGGATTAACAA
AGTCAAACGGTTGAGCCTCTATTGGCCTCTGGGATTGCCCATAACGCGTA
TGGCTACAAGAGATTAGGGTGGTCGTATGCACCCTATTGAACTGGCCAAT
CACGGAGGGGCTGAAGAACAAATGTTTTTATGTTCTTTTTCTTGTACATG
GCTTGAGTACTTTGACCGATGGAGGCATTGTCATCTGGGTCGGGTCGGAA
GCCCCTCTCTCGCGAGAGGGAAACCTGGGTTCCAGGCAGGGCTTGCTGGG
CGCGCTTGCGCTGTAAGCGCAGTATTCTATTCAGTAGCACAGCTTCCACT
TCTGCGATTTGTTCAAGAATGCTTCACTCGTCGTATGTAAACAGCATACT
TCTGCACGTGTATGGTTCTAGCTAGCTGCCTTTCGTCCCCCTTATGGTGT
AATCTGTGTGAATGCGATCTGTACAACTGACGAAAGCTGTGCCAAAATAC
TCCGCTGTCTAGATTTTTTTGGTGGATGTATACGTGCGTGAAGTAAACCC
CGTTCATGGATGTTCTTAACACGCCTGGAAAGCTGCATGTGGGTACAGTT
TTGCTTAATATCTGTATCTGTTGCACAATGTTGGTGCATCCATTGTTCAG
ACCACCGACCATTTTTGTCTAACTTTTTTTTGGAAAAAAGTTGAAATATA
TTTCACCGGGAATCGAACTCGTATGTTTTGGGTCACGTGAATATCGCCCT
CCAGGCTCAACGCTTCGCCGGTGCTGCTTCCGAGGCATAATTTTGTGGCA
CATTCAACGCAAACCCCCACCCAAACTTGAGTTATAAGGCTGCCCGTTGA
TCCTAGAGTACGTTGGTAGAGCGCTGTGTTCCGCCTCAACAGGGTGCAAC
CCAAGTGTTAAGTCACAACACAGGGAAGAGACAGGCAATACAGAGTGTGC
CATTATCCAAAGGGTGGGTGTCCAACTTTTCAATAAGAGTCGGGGTGATA
CATATTATTTTCGGGTCGTATGATTGTTCAGACTACTCGAGCCCGATACA
TTCGATGAAATGGTTTCTGCACGGGGATGTGCTTATTTTGAGAACTTGAC
CGGCAGGCCTTGATGTCGTCGCTCTTCTCAGCGATCAGGATCTGTCGTTA
GATATTTACACAAGACGTGGTAGATTTCACACATGGATGAATTTAGGGAG
ATTCGTTATTGAGACATCGTATGTACAGGCGATATTTCCACAAATTTGAA
ATACGTTGCTCTCCCTTCTCTCAACAAAAATCAGGACCCTCAATAGATCA
TTCAATGGCGTGTTCAAATTCCTACCTCTATACGCCACTCCCACCGGATA
CCCCCCCGTCGTGTTCTAATTTCATCTTGTGATCGCTCCCACCTCCTATC
CAAACCTACCAGGACGAAATTCGACGTAGAGCCCAAGAGACTCATCTTCC
AAGGACGCATCCTCAAGACGGACGAACAGACCGTTGCCGAGTGCAAACTA
AAAGATGGACTCACCGTCGTTGTACAAGCTTCCCCGGCATCCTCTGCCGT
CGCCGCCACCCAAGCCATGCCGTCCCCAACGGCGACTACCGCTGCTTCGG
CTGGCGTCGCAGGCGTTAGTGCCGCGCCCACGGCGACCACTGCCGCGTCT
CACGCTGCGTTTGCACAGGCCGTGGCGGAGCGTATAGAACACACCACTGC
GACACACAGAAGCAGTGGCCCGGTGGGGGAGGCCGTGGCCACGATTCGAG
GGCAGGAGGTGGCGTTGGCCAGGGAGTGTCTCACCACGCTCAAGAAGATA
GTTGACAATATTCTGTCGCATCCCATGGAGGACAAGTACAGGAAGATCAA
GAGGACCAACGCCGGGTTCAAGCGGAAGGTGCGTTTTTTTCTTTGTTGTT
GAAGGCGGAGCCGGAGGCAGCAGCGGCCGCTGCGAGCACTGCGGGACGGA
ACTGATGTAGTTATCCCTTTGCAGAGTGTCGGAAGTAGTTTTGGAAGGGT
GCAGTATGTACCGTGTGGGTATCTACGTGATTGCGTGTTTTTGTTCTTTC
TTGGTTGGGTACTTCGTTTGTTCGCCAAGCATAAAAAGTTACATGCCGCG
TCTGGGACGCATGCTGATCATGGACTCGTTGTACTGTTTGTGGTGGGTAC
CAGCGGGTTTGACAGTATAGCTTGTGCCGAGCACTCTCCTTGCCGCCACG
TTCATGGAGGTTTTCTTCTCATCCCAATCCACCCTTGTTGCACGCAAATT
GAGCACTTTCACCTTTGATCTAACCTTTCTCTTCGCACGTCCGTCAATGG
GGCTGTAGTTTTGGTCATGAGTGTACATTCAGTGATGCTTCTGAGGAAGC
GAAGTCCAAAAGAAGCAGTATCACCAGCGTTCGCTTCTCTCCAAAAGCCG
TTTCCTCAATGCTGCTCTACACAAGCAAGCAGCAGCCCTTAAGAAGTGCT
ATTGAACAGGTTTGTACCTAACAGAGCGCCCCCTTTGTGACCTAATGTTG
CTGGTGTGTAGAACAACGGGGGCTTGAAGTCAGCTGCATAACCTTAATAT
GAGTACAGGGAGATATTATATAAGCTTCAGATTTCTAATTCAACTGATTG
TGGCAGAGTTGACTTACGGATGGCGGTTTTTGGAGGTTGTCGATCGAAAT
TATTTCATGTTTTACCCACAGTACACATGCGAGTAATAGAGTGATGCTCC
CTTGTGAAAGTTGGCGCTGTTCATGTCATGGTATTTACCTCCACCCGCTC
CTCTTCAATCAAAACGATACTGTTTTGCGAAAGGAAGGTCGGAGCAGTGC
GAGGTGGAGAAGCTTGCATGCGAGCGCTGGGCTTCACCGAAATCGATGGC
GCCGAAGGGAGCTGGCTCCTGCAGCCAAATGCCGCCGCATGGACGGTGCT
GACCTCCGGACGCTCGGAAATAGAATCGGCCTTGTTTCTCCTTCCGGCCG
CGGCTGCGACCGATACCGCTACACGTACCGCCATGGGTACTAGCGGTGCA
AGCGGAACCCGTGCCACTCCGGGCTTTGCTGGCGGCATGGGGGTGATGCC
ACCTGCGACCGCTTTCGCGACTACAGGAGGGAATATGGGTGGAATGGACG
GGGGGATGGGGATGGGGATGCCGGATATGGACATGATGCAGCGGCTTATG
CAGAATCCGGCGGCATTGCAAGGGGCGATGAATGATCCTTCTATTCAGGC
TATGTTGGGCCCAGAGATGGCAGGGCAGATGCGGGTAAGGGGGTTTGGGG
GGCGGGGGGGGGGTTGGGGTGGGTGGGTGGGTAGACAGCGAGAGAGAGAG
AGATGGTCAATTGCGGCGAATCAAATGAGCTGTTCGACCGTGTGCCCTAT
GCTATTGCTTATTATGTACATTGCTGTACAGAGTTGTTGTCGAGGTCGTG
AAAACCCGGATTTTCGATCTTGGTTGTCGCTGTAGGCTAGCTGCCGGTGC
CGCGTGTGTGTTCAGAGTTTGTATTCTTGTCCAAGCATTTTCGGTTTGGT
GCTGCGCCGATTTGATAGGGAGCTTTGATGTCAAGACACGTGTCATCAGA
CGCTACTGGCATATTCTGCAGAGAACAGGGCCTGCGCATCTGCGTTTCCT
CTTAATTTTCTGTTTGTCACATCACACTTTCTACGGGCAAACACCAACAA
ACGCCCTTAAGGAGTGGCTTCTACTCCTATGCACGTGTATACAGGTCCAT
GCATCGATACACCCCTTATGGGTAAATTTGGCGGATGGCTGTACATGGCT
GTGATCGTGGGTTGCGTTCTATATCCTCAGCATGATTGTTACAATTTTTC
GGGCGGCTCGTCTGTTTTGCTGGGTGGGCGTGTGTGTATTTGTATCATTA
TCCAGGGCTAGGTCATGCTAGCCCACCTTGTTTTGTGTGAAGTTTGCTGG
TTTGTGTGTACATTGAAAACACTGGAGAAGATGTGGCAAGTCATCAGCGT
ATCGACTGTTATATTATTGGAGATTTGAGGGTGAACTTAGACTTATTTCC
CCAGTGTAGATTCCGATACCGTGCAATTTTCTCTGCAATTTTCATGCTCT
AACGGTATAGTTGTACTTCCTGGTAGATGTAGCAGTTAGTTCACGCACTA
TGTCCATTTTAAGGGGTGCTATTAGTCCGGATATTTGACCGTGTGCGAGG
TGATTCACACGCCATATCAGGTCAAAGATCTCCACGCGGTTTATATGTAG
CTCTCTCCAAACCATCATGGCAGTGAAATTCGTATTCTCCTGCAAGATGC
CACTGTTGTCGAGATGGATGACACATGGTGGGTAATGATAAGGGAGTAAG
CACTTGTTTACCCATAATTCTCTTGGCATTGTGCACTCCGGATCTATCAC
AATGGGGGTAGCTTTGCTACGCGCTATGCTAGCTAGCTAGCACTCCGGAC
GCGTGTATACAGTGACTTAGATATGCTGCATGTAACCTTGGGTTTATCCT
GTATCGACTATTCGGATCGTCATTTTTTGCAATCTTTCCAGTCGTTTTCC
AAGATGTTCCTGTGGATAGTAAAACATACCAGTATTTACTGCCATGTTTG
TATGTTGAATCCCCCCCCCCCCCTAGTGTGTTGATTTTGTGCATAAGTAA
TCCAGCAACTTGAATATGTTGAGCACGCCTCCATTTTTTTAGGGTCATCG
TCATGTTCCTACATTACACAAATTACTTCCTCCCCCCTGTCCCCGCCCCC
GCCGTCTTCATCTTCCCGCGCGCAGACTATGATGGCAAACCCAGGATTCA
TGTCGCAGGCCATGAGCACTATCAGAAACAATCCGGACATGGTGGCTTCG
TATGCGCAAGGCCTGGCGCGAAACCCCAGTCCGTCGGCCTTGCAGAGGGC
GGGTCTGCAACTTGGAGCAGATATGCAGGGAAACATTGGAGGAGGCGGGG
CGGGTACAAATCCTACCGGGGGGGGGTTCCCTCCGGCGCCGGCGCCGACA
ATGGGAGGATCGGCGGTTCCTGGCCCGAGGGCTTTGGCAGCAGAGCCACC
AGTGGCCAGGACCCAGACCCCTTCGGCAGCAGAGCCACCAGTGGCTCGAA
CCCAGACCCCTTCGGCAGCAGAGCCACCAGTGGCCCGGACCCAGACCCCT
CCGGCAGTAGACCCACCAGCGGCCCGGACACGGAGGCCTGCAGCGGGGCC
GGGTGCAACAGGGGCAGCGGGGGAAGAGAGCAGGACGGAGCAAGCAGAGC
AAGGATGGGATGAATTGTTGGCAGAAACTCTACGAAGGTCTATGGAAGAT
CACTAAAGCTTTTGCCCGGGGGTGGGGGAGGGTTATGACTTGAACATGCC
ATAATGAGAGGTTGTTGGCCTTGTGTTGGTGCATTGCCAAAAGGCCAAGC
GATATGCTGGGTTTTCTTCGCCTGAGACTGCGCTTAGTGAGTACGAGGTT
GGTGAGCTAGGTTCACCCCCTTGCCCCAAGCCAAACAAAACATTCTGGTC
ATCAAGCTTGGATTTGCAGTTTAGCTACAGGGCGTCGAGCGGGAGGGGTT
ATGTGTCGCCCTGCAGTTTGTTGACGGAAGACTCTAACCCATGTTTTATT
TTCCCCACGGATGTGTACATATACAAGCGTCTTTCGGGTCGTGTCTGTCT
CGTTGCTGTACAGTAGCACTTTTGCCTGGAGTCTGGAAGCCTCACGGAGT
CTACAACATGTATTGGTGTGTTTGCACGAGATCGGGAGTTCCGCCCAGAC
ACCGTTTTTTTTCCCCCGAAGGATCGCGTCGATTTGTACACGTTACGCTA
GTTTTTGGTCTGGTCCAATGTGGACACGGTGTTCGGCGATCTATCGATCC
GCGAATCGATCTGCGGGTGATCGCTCTTTTTTGTGTTACACTCGAGATAC
GGTAGTGCGATTTGTTTTGGCAACATTTTCATGTTTTTTATTTACATCTT
TTTTTAGCACTTTTCAGAGAGAAACGACCAATCCGATGCGCGGCCAAATT
AAGTGATTATGGTGCAAGTGAGACCGGTTCCTCAAGAGAGCGCTCGTTTA
GCCCCCCTCTCGTCTGCGGCTAGGCACCGGCTTCTAATAAAAAAAGTACG
GTCATCACCATCCCCGCCTGCTTAATGATGGGTCTAACACGTACATTGCC
GTAGGTGAGCTGCCTACCCTTGCCGCGATAAGCGCGTCTGTGTCCCGCGT
GTTTCCTCGTGACACCGTTTCCCCCCCCGCTATTACTTGTATGTGTTTTT
AGGCGCCCTTTGGAAGGGGGGTGCAGTCAAGCTCTATTCCGTGGTACTGA
ATCTTAAATATGTATTACTTGCCGTTTTGATTTCTGGTTTTGTTTCTTTG
CGTAAACACACAATGTGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1359:1261..9628-

>mRNA_H-paniculata_contig1359.2216.1 ID=mRNA_H-paniculata_contig1359.2216.1|Name=mRNA_H-paniculata_contig1359.2216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3180bp|location=Sequence derived from alignment at H-paniculata_contig1359:1261..9628- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAGAAAACGTACGCGATGAAGCAGAGAGCGCTGATTCTGGCCTGGC
CAGCATCAACATCAAATTTACTTCTTCGGACAGGGCAGCTGGCAAGGTGG
AAATCTCTCTTGATGCCACGATCAGCGAACTGAAACAGTCCATAAGATGG
CAGAAAACGTACGCGATGAAGCAGAGAGCGCTGATTCTGGCCTGGCCAGC
ATCAACATCAAATTTACTTCTTCGGACAGGGCAGCTGGCAAGGTGGAAAT
CTCTCTTGATGCCACGATCAGCGAACTGAAACAGTCCATAAGGACGAAAT
TCGACGTAGAGCCCAAGAGACTCATCTTCCAAGGACGCATCCTCAAGACG
GACGAACAGACCGTTGCCGAGTGCAAACTAAAAGATGGACTCACCGTCGT
TGTACAAGCTTCCCCGGCATCCTCTGCCGTCGCCGCCACCCAAGCCATGC
CGTCCCCAACGGCGACTACCGCTGCTTCGGCTGGCGTCGCAGGCGTTAGT
GCCGCGCCCACGGCGACCACTGCCGCGTCTCACGCTGCGTTTGCACAGGC
CGTGGCGGAGCGTATAGAACACACCACTGCGACACACAGAAGCAGTGGCC
CGGTGGGGGAGGCCGTGGCCACGATTCGAGGGCAGGAGGTGGCGTTGGCC
AGGGAGTGTCTCACCACGCTCAAGAAGATAGTTGACAATATTCTGTCGCA
TCCCATGGAGGACAAGTACAGGAAGATCAAGAGGACCAACGCCGGGTTCA
AGCGGAAGGACGAAATTCGACGTAGAGCCCAAGAGACTCATCTTCCAAGG
ACGCATCCTCAAGACGGACGAACAGACCGTTGCCGAGTGCAAACTAAAAG
ATGGACTCACCGTCGTTGTACAAGCTTCCCCGGCATCCTCTGCCGTCGCC
GCCACCCAAGCCATGCCGTCCCCAACGGCGACTACCGCTGCTTCGGCTGG
CGTCGCAGGCGTTAGTGCCGCGCCCACGGCGACCACTGCCGCGTCTCACG
CTGCGTTTGCACAGGCCGTGGCGGAGCGTATAGAACACACCACTGCGACA
CACAGAAGCAGTGGCCCGGTGGGGGAGGCCGTGGCCACGATTCGAGGGCA
GGAGGTGGCGTTGGCCAGGGAGTGTCTCACCACGCTCAAGAAGATAGTTG
ACAATATTCTGTCGCATCCCATGGAGGACAAGTACAGGAAGATCAAGAGG
ACCAACGCCGGGTTCAAGCGGAAGGTCGGAGCAGTGCGAGGTGGAGAAGC
TTGCATGCGAGCGCTGGGCTTCACCGAAATCGATGGCGCCGAAGGGAGCT
GGCTCCTGCAGCCAAATGCCGCCGCATGGACGGTGCTGACCTCCGGACGC
TCGGAAATAGAATCGGCCTTGTTTCTCCTTCCGGCCGCGGCTGCGACCGA
TACCGCTACACGTACCGCCATGGGTACTAGCGGTGCAAGCGGAACCCGTG
CCACTCCGGGCTTTGCTGGCGGCATGGGGGTGATGCCACCTGCGACCGCT
TTCGCGACTACAGGAGGGAATATGGGTGGAATGGACGGGGGGATGGGGAT
GGGGATGCCGGATATGGACATGATGCAGCGGCTTATGCAGAATCCGGCGG
CATTGCAAGGGGCGATGAATGATCCTTCTATTCAGGCTATGTTGGGCCCA
GAGATGGCAGGGCAGATGCGGGTCGGAGCAGTGCGAGGTGGAGAAGCTTG
CATGCGAGCGCTGGGCTTCACCGAAATCGATGGCGCCGAAGGGAGCTGGC
TCCTGCAGCCAAATGCCGCCGCATGGACGGTGCTGACCTCCGGACGCTCG
GAAATAGAATCGGCCTTGTTTCTCCTTCCGGCCGCGGCTGCGACCGATAC
CGCTACACGTACCGCCATGGGTACTAGCGGTGCAAGCGGAACCCGTGCCA
CTCCGGGCTTTGCTGGCGGCATGGGGGTGATGCCACCTGCGACCGCTTTC
GCGACTACAGGAGGGAATATGGGTGGAATGGACGGGGGGATGGGGATGGG
GATGCCGGATATGGACATGATGCAGCGGCTTATGCAGAATCCGGCGGCAT
TGCAAGGGGCGATGAATGATCCTTCTATTCAGGCTATGTTGGGCCCAGAG
ATGGCAGGGCAGATGCGGACTATGATGGCAAACCCAGGATTCATGTCGCA
GGCCATGAGCACTATCAGAAACAATCCGGACATGGTGGCTTCGTATGCGC
AAGGCCTGGCGCGAAACCCCAGTCCGTCGGCCTTGCAGAGGGCGGGTCTG
CAACTTGGAGCAGATATGCAGGGAAACATTGGAGGAGGCGGGGCGGGTAC
AAATCCTACCGGGGGGGGGTTCCCTCCGGCGCCGGCGCCGACAATGGGAG
GATCGGCGGTTCCTGGCCCGAGGGCTTTGGCAGCAGAGCCACCAGTGGCC
AGGACCCAGACCCCTTCGGCAGCAGAGCCACCAGTGGCTCGAACCCAGAC
CCCTTCGGCAGCAGAGCCACCAGTGGCCCGGACCCAGACCCCTCCGGCAG
TAGACCCACCAGCGGCCCGGACACGGAGGCCTGCAGCGGGGCCGGGTGCA
ACAGGGGCAGCGGGGGAAGAGAGCAGGACGGAGCAAGCAGAGCAAGGATG
GGATGAATTGTTGGCAGAAACTCTACGAAGGTCTATGGAAGATCACTAAA
CTATGATGGCAAACCCAGGATTCATGTCGCAGGCCATGAGCACTATCAGA
AACAATCCGGACATGGTGGCTTCGTATGCGCAAGGCCTGGCGCGAAACCC
CAGTCCGTCGGCCTTGCAGAGGGCGGGTCTGCAACTTGGAGCAGATATGC
AGGGAAACATTGGAGGAGGCGGGGCGGGTACAAATCCTACCGGGGGGGGG
TTCCCTCCGGCGCCGGCGCCGACAATGGGAGGATCGGCGGTTCCTGGCCC
GAGGGCTTTGGCAGCAGAGCCACCAGTGGCCAGGACCCAGACCCCTTCGG
CAGCAGAGCCACCAGTGGCTCGAACCCAGACCCCTTCGGCAGCAGAGCCA
CCAGTGGCCCGGACCCAGACCCCTCCGGCAGTAGACCCACCAGCGGCCCG
GACACGGAGGCCTGCAGCGGGGCCGGGTGCAACAGGGGCAGCGGGGGAAG
AGAGCAGGACGGAGCAAGCAGAGCAAGGATGGGATGAATTGTTGGCAGAA
ACTCTACGAAGGTCTATGGAAGATCACTAA
back to top