prot_H-paniculata_contig13571.2206.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig13571.2206.1
Unique Name	prot_H-paniculata_contig13571.2206.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	294

Homology

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BLAST of mRNA_H-paniculata_contig13571.2206.1 vs. uniprot
Match: A0A6H5JYC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC0_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 6.120e-46
Identity = 96/202 (47.52%), Postives = 114/202 (56.44%), Query Frame = 0

Query:   90 LEGARGVEVAARLYRVLDAGGDGRLDFQEFSSGACLLKGSPEEDKLQLLFKMYSDTGKAGVVGRDGLRAFILDMIAASPPPIAPPGCKSHRGVSLNGRKISPPIAGIEGGSLASNGDMEGVHSGVMLEGARWGGVEDQGVTDFELELKDVLDRMTGVVLAEHDSDGDGMLSEKEWKAYLQREEDGVGAFLETLSDSVGQLLL 291
            L G RG EVA RLY VLDA GDGRL F+EF+S ACLLKGSP + KL+LLF+MY D  + G+VGR+GL+A ILD+IAASP                                                              DFE EL  +L +M  VVL EHD+D DG+L+EKEWKAYL++EED V AFL+TLSDSVG LLL
Sbjct:   87 LPGPRGAEVAKRLYGVLDANGDGRLSFEEFASAACLLKGSPHQTKLELLFRMYGDASRGGLVGREGLKALILDVIAASP-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDFEKELGGILAKMADVVLTEHDADNDGLLTEKEWKAYLKQEEDSVIAFLDTLSDSVGNLLL 269

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BLAST of mRNA_H-paniculata_contig13571.2206.1 vs. uniprot
Match: D7FPF0_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF0_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 2.270e-12
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 0

Query:  243 MTGVVLAEHDSDGDGMLSEKEWKAYLQREEDGVGAFLETLSDSVGQLLL 291
            M  VVL E+D+D DG+L+EKEW+AYL++EED V AFL+TLSDSVG LLL
Sbjct:    1 MADVVLTEYDADNDGLLTEKEWRAYLKQEEDSVIAFLDTLSDSVGNLLL 49

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig13571.2206.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig13571.2206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JYC0_9PHAE	6.120e-46	47.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FPF0_ECTSI	2.270e-12	69.39	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 252..264
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 247..274 score: 8.293
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 94..129 score: 9.604
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 97..272

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig13571	contig	H-paniculata_contig13571:2616..6346 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig13571.2206.1	mRNA_H-paniculata_contig13571.2206.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig13571 2053..6691 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig13571.2206.1 ID=prot_H-paniculata_contig13571.2206.1|Name=mRNA_H-paniculata_contig13571.2206.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp
MGNTSTSLGGKDSTSATRQPRGGRVGEAGGLYDRALLRIRFEQLAKPLPS
TATVVASGEQSGDPSVTAVGTTIGSASAQKFVLFEDCSKLEGARGVEVAA
RLYRVLDAGGDGRLDFQEFSSGACLLKGSPEEDKLQLLFKMYSDTGKAGV
VGRDGLRAFILDMIAASPPPIAPPGCKSHRGVSLNGRKISPPIAGIEGGS
LASNGDMEGVHSGVMLEGARWGGVEDQGVTDFELELKDVLDRMTGVVLAE
HDSDGDGMLSEKEWKAYLQREEDGVGAFLETLSDSVGQLLLLQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair