mRNA_H-paniculata_contig1357.2204.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI) HSP 1 Score: 304 bits (779), Expect = 2.060e-83 Identity = 171/309 (55.34%), Postives = 207/309 (66.99%), Query Frame = 2 Query: 62 IVPPYTLETYQFDNLGVKVCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSS-LAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASSDVDPVSDKSYLLPRRVTTTAGKPYPVYSTVAQGGFLTMGVADRVNIDP 985 ++ P +E +FDNLGV++ +V CGREHSLAVS+AGRLY FGP +GGRLG AV G GVSAPRIVR+ LA ERVV AAGG +HS+CVC SGKVFTWGHG+TGALGHG DE PR+V FG + + + G D +A LA VACGAWHTLV+T G+V+AFGDGFTGQLGL RG + S+AL P V + +R + + + V + +VACGSFSSA VS+EG LY WGK DA SD DPV+DK YLLPRRVT+ G P Y VAQG LT+G+A+ V DP Sbjct: 1688 VLSPRRVE--EFDNLGVRITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEAR-----SAPQGAGEQDDPDADI--LATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRI--ERNAGGGGGSPGD---------VYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVADKRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDP 1976
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A6H5L3G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G6_9PHAE) HSP 1 Score: 242 bits (617), Expect = 6.900e-70 Identity = 137/260 (52.69%), Postives = 166/260 (63.85%), Query Frame = 2 Query: 209 GLLAVAGQRGVSAPRIVRSS-LAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASSDVDPVSDKSYLLPRRVTTTAGKPYPVYSTVAQGGFLTMGVADRVNIDP 985 G AV G GVSAPRIVR+ L+ ERVV AAGG +HS+CVC SGKVFTWGHG+TGALGHG DE PR+V F G +++ + G + LA VACGAWHTLV+T G+VYAFGDGFTGQLGL RG + S+AL P V + +R + + + V + +VACGSFSSA VS+EG LY WGK DA SD DPV+D+ YLLPRRVT+ G P Y VAQG LT+G+A+ V DP Sbjct: 20 GFKAVVGAGGVSAPRIVRAPCLSEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGF-------GRDVDRSATQGTDEQDGPDADVLATSVACGAWHTLVLTKAGKVYAFGDGFTGQLGLEDRGGEKESRALSPRVVRI--ERNAGGGGGSPGD---------VYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDRRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDP 261
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A5D6YAN1_9STRA (PH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAN1_9STRA) HSP 1 Score: 117 bits (292), Expect = 7.990e-23 Identity = 78/246 (31.71%), Postives = 125/246 (50.81%), Query Frame = 2 Query: 131 CGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSSLAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASSDVDPVSDKS 868 CGREH+LA+++ G ++ FG GGRLG+ + A + + ++L R+V G+ HSA V +SG VFTWG GN+GALG G+ ++ +P + ++ A +D D + + +ACG +HTLV T+ G++Y +GD GQLG + P ++L I L+ RTT + P I +V+ G+F+SA +G L+ WG A + +D++ Sbjct: 1505 CGREHTLALTKQGEVFAFGAGFGGRLGIGSEADEE----YPVRVAALDGVRIVRIDAGECHSAAVNDSGDVFTWGFGNSGALGTGSRDNSLLP--------------TKVSGAWQD---DEDESGAQATVTALACGGYHTLVATSAGKLYGWGDSAAGQLG--------AALVAAPDMIVLAPHEIPLAGVRTTPSSGSPPP----TIREVSAGTFTSAVCLDDGRLFVWGSTAAGNGAPLQADEA 1717
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A2R5GRJ8_9STRA (Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRJ8_9STRA) HSP 1 Score: 107 bits (266), Expect = 9.760e-20 Identity = 73/238 (30.67%), Postives = 113/238 (47.48%), Query Frame = 2 Query: 110 VKVCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSSLAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWG 823 V++ V CGREH+L +S +G +++ G GRLGL R + P ++ +L E+VV + GD HS V G V++WG G +GALGHG T + P+ V R + V CGA+H++ + GRV+ +GDG GQLG+ G++ S + + G+ I R A + P ++ Q+ACG+ + A+ E L+ WG Sbjct: 1390 VEIVSVSCGREHTLLLSRSGMVFSCGVATCGRLGLGDAGRDRLI--PTRIKGNLEDEQVVAVSAGDAHSLAVTSDGVVYSWGFGESGALGHGDTQNRLDPKRVALL-------------------------QDMRRVIQVGCGAYHSVALDDQGRVWTWGDGINGQLGIEQDGAMGNSSS----DDETGASTIP----RMVRFARVAPSGANIK--QIACGTNTVWALDAENKLFHWG 1590
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A7S1CDT0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDT0_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.760e-19 Identity = 94/316 (29.75%), Postives = 137/316 (43.35%), Query Frame = 2 Query: 116 VCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSSLAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVP--------------HFGPEATAEGSNINIA-ERDGHLDHR-----------NASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASS-DVDPVSDKSYLLPRRVTTTAGKPYPVYSTVAQGGFLTMGVADRVNID 982 V +VVCG H+ A+++ GRL+T+G + GRLGL PR V S + A G LH+A + G+V TWG G +G LGHG D+ +P LV H + +G + DG L H A R V +ACG WH+ +T+ G + +G +GQLG + S T P VL G + I +ACG+ +AA++ +G ++ WGK D V+ +D++Y PR VT + V V G + T VA V++D Sbjct: 296 VVQVVCGELHTAALTDDGRLFTWGLGKDGRLGLGTTESHH---VPRAVEFSRG-VAITQVACGGLHTAALTSDGQVLTWGLGASGRLGHGDELDQMVPTLVRSLAGTPMQQVLCGGHHSAALSGDGRVFTWGFDDDGRLGHGVPGHQFVPKLVEALLMRTVVQIACGCWHSAALTSDGAAWTWGSCKSGQLGTAAKNSSAT-----PRVVLQG---------------------KGGGIVSIACGTAHTAALARDGTVFTWGKHDDGRLGVESTADQTY--PRAVTNLVERGLAVQQVVC-GVYDTAVVA--VSVD 576
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A2R7WNR5_ONCFA (MIB/HERC2 domain-containing protein n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WNR5_ONCFA) HSP 1 Score: 105 bits (261), Expect = 3.640e-19 Identity = 93/283 (32.86%), Postives = 133/283 (47.00%), Query Frame = 2 Query: 71 PYTLETYQFDNLGVKVCKVVCGRE--HSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSSLAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAW--HTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASSDVDPVSDKSYLLPRRVTTTAGK 907 P +E + G ++ + C + H +A+S G +YT+G +GGRLG + P +V++ LA RVV + G +SA V E G++FTWG GN G LGHG++ D ++P LV + +G NI V VACG+ TL VT G VY++GDG G+LG RG + S+ LP LV + V I +V CG+ S A+ST G LY WGK D + + SD+ P+ + GK Sbjct: 319 PEKIEAFN----GKEILDISCRADGKHFMALSSEGEVYTWGMGDGGRLGH---GDTNSRTEPHLVQA-LASHRVVRISCGSSYSAAVSEKGELFTWGRGNYGRLGHGSSEDVSIPTLV------SALKGQNI--------------------VDVACGSGDAQTLAVTETGLVYSWGDGDYGKLG---RGGSDGSK--LPK---------------------LVERLQGVHIVRVYCGNQFSLALSTAGELYSWGKGD-NFRLGHSSDEHVRFPKLIMGLKGK 540
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A7S2BIE0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BIE0_9EUKA) HSP 1 Score: 103 bits (258), Expect = 7.270e-19 Identity = 94/310 (30.32%), Postives = 139/310 (44.84%), Query Frame = 2 Query: 104 LGVKVCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSSLAHERVVNAAGGDLHSACV-CESGKVFTWGHGNTGALGHGTTNDETMPRLVPHF----------GPEATAEGSNINIAERDGHLDHRNASQRRLA----------------VGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGS--LETSQALLPHEVLLGSKR-----------ISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCD---ASSDVDPVSDKSYLLPRRVTTTAG 904 L K V CG +H+LA++ AG +Y++G GGRLG RG+ P++V L + + A G+ HS V E G+ +TWG G+ G LGHG T + +PR + +F G +A S+ I G + Q V VACG +HTL +T G +Y+FG G+LGL + ++T Q P + + R + S + TTA LV R +I+ + G+F SAA+S +G +Y WG D+ +K + PRRV G Sbjct: 182 LSKKCISVACGSKHTLALTAAGGVYSWGYGGGGRLGC---GDTRGLFRPKLVEL-LKDQPCLLIAAGESHSMAVTAERGQCYTWGVGDYGKLGHGDTTPQPLPRHLEYFRQHTLTWVSGGTFHSAGCSHQGILYTWGGGTYGKLGQMATINSLTPRPVKSVTDAHFVQVACGTFHTLALTNSGDMYSFGFNGNGRLGLADKSGSGMDTKQRTTPELIKSYASRGAKDTEDIGLPVDDSQAATTA---LVKALRPKKISHLCLGAFYSAALSDQGDVYTWGDGRHGVTGLDLSRQEEKEVVKPRRVLGLGG 484
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A7S4IFA4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IFA4_9EUKA) HSP 1 Score: 100 bits (248), Expect = 4.680e-18 Identity = 84/298 (28.19%), Postives = 131/298 (43.96%), Query Frame = 2 Query: 107 GVKVCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVS--APRIVRSSLAHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAE----------------------GSNINIAERDGHLDHRNASQRRLAVGV-------ACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASSDVDPVSDKSYLLPRRVTTTAGK 907 G+ + +V CG H+ A+++ G+LYT+G + GRLG G ++ +P++V +RV+ G + SA + E V+TWG G LGHG T + P LV ++ GSN + GH D N +L G+ ACG +HT V+T G +Y +G+G GQLG H ++ LP + L K ++ Q+ACG+ +AA++ G L+ WG C + + +K+ PR V + AGK Sbjct: 243 GIIITQVACGDFHTGAITDTGKLYTWGKGDDGRLG----HGDMSLAYLSPKLVEF-FDGQRVIFLDCGYVTSAAITEDNSVYTWGGNEKGQLGHGDTENRLSPTLVQSLNGRNISQIACATWHTAAISSGGHVYTWGNGSNGKL----GHSDEENQDFPKLVDGINGKVTQIACGDFHTAVLTEEGIIYTWGEGNYGQLG--HGSAISQHNKPLPIQKPLEGK----------------------KMVQIACGANHTAALTDNGQLFTWG-CAVNGRLGHGDEKNLWSPRVVVSMAGK 506
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A8K1CK85_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK85_PYTOL) HSP 1 Score: 100 bits (250), Expect = 6.750e-18 Identity = 91/302 (30.13%), Postives = 126/302 (41.72%), Query Frame = 2 Query: 116 VCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRG-------VSAPRIVRSSL-------------------------------------------AHERVVNAAGGDLHSACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPHEVLLGSKRISLSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWGKCDASS--DVDPVSDK 865 V +V CGREH+L V + G +Y FG E GRLG G+ G V A R +++ + E VV G+ HS V + GK+FTWG G++GALG G+ +E +P+ + GP +G + A ACG++HTL T GR+Y +GD GQLG S E L PHE+ L + E L+ + R +ACG+F SAA ST+G L+ WG A + +DP K Sbjct: 1255 VAQVSCGREHTLTVLQNGDVYGFGWAEAGRLG----TGESGSVFLPTKVEALRDIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEIVVAIDAGECHSCAVTQDGKMFTWGFGSSGALGTGSRENELVPKKIE--GPWKDNDGEWVTSA--------------------ACGSYHTLARTNQGRLYGWGDAAAGQLGEELLKS-EDMVVLTPHEIELAVANVG--------EVELISQEVR----DIACGTFMSAACSTDGQLFVWGSAAAGNGAQLDPEDAK 1517
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Match: A0A0M0K9T2_9EUKA (Rcc1 repeat-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K9T2_9EUKA) HSP 1 Score: 100 bits (249), Expect = 8.390e-18 Identity = 84/287 (29.27%), Postives = 132/287 (45.99%), Query Frame = 2 Query: 104 LGVKVCKVVCGREHSLAVSEAGRLYTFGPYEGGRLGLLAVAGQRGVSAPRIVRSSLAHERVVNAAGGDLHS-ACVCESGKVFTWGHGNTGALGHGTTNDETMPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLVVTAGGRVYAFGDGFTGQLGLPHRGSLETSQALLPH----EVLLGSKRIS--LSNSRTTAEALLVPEHRRVRIAQVACGSFSSAAVSTEGVLYCWG--KCDASS-DVDPVSDKSYLLPRRVTTTAGKPYPVYSTVA 934 LG V CG +H++A++ AG +YT+G GGRLG RG+ P++V + L + + A G+ HS A E + +TWG G+ G LGHG T + +PR + +F N + G H A + V CG +HT+ +T G ++ FG G+LGL + S+ + H E ++ + S +S A+A I + G F S A+S +G +Y WG + A+ D+ + ++ P RV + G PV A Sbjct: 186 LGKACISVACGSKHTIALTAAGSVYTWGYGGGGRLGS---GDTRGMFRPKLV-NDLKDQACLMIAAGESHSMAITAEKAQCYTWGVGDYGKLGHGDTTPQLLPRHLEYF--------RNAQLIWCAGGTFHSAACAQP---DVECGTFHTIALTKNGDLFTFGYNGNGRLGLGAQNDPSKSRTVPAHIKNLEKVMSDRDDSGNFGSSGDAADAAYKKALTPKYIRYLCFGGFYSVALSDQGDVYTWGDGRYGATGHDLSRLDEREVSRPMRVLSLGGHRKPVIQLAA 457 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1357.2204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1357.2204.1 >prot_H-paniculata_contig1357.2204.1 ID=prot_H-paniculata_contig1357.2204.1|Name=mRNA_H-paniculata_contig1357.2204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp MPRLVPHFGPEATAEGSNINIAERDGHLDHRNASQRRLAVGVACGAWHTLback to top mRNA from alignment at H-paniculata_contig1357:17276..23725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1357.2204.1 ID=mRNA_H-paniculata_contig1357.2204.1|Name=mRNA_H-paniculata_contig1357.2204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6450bp|location=Sequence derived from alignment at H-paniculata_contig1357:17276..23725+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1357:17276..23725+ >mRNA_H-paniculata_contig1357.2204.1 ID=mRNA_H-paniculata_contig1357.2204.1|Name=mRNA_H-paniculata_contig1357.2204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig1357:17276..23725+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |