mRNA_H-paniculata_contig13568.2203.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: D7FGU0_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU0_ECTSI) HSP 1 Score: 327 bits (838), Expect = 1.320e-109 Identity = 174/261 (66.67%), Postives = 204/261 (78.16%), Query Frame = 1 Query: 1 QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSRQGEGDAREGEAQRGRK---AKNPQLGVIRD--YARLRKVVGSSDAICLLQTLTS 765 Q+R++EG +FPWCGVRFDT+TCEV+ANYSR+ K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE G+NSR TVLLNVYEM+LVCAAKTA SALRLPRGP GN SLLSNGA++TT+YAYSLIQ+RSNRR G FGTS+G++CVCKIHR EVTWLGLHAFREVF AF+ K RGF KL + AL E G G + SR+ +EG A G + + Q GV R Y RLR+VV S DA+ LLQTLTS Sbjct: 44 QVRRVEGDMFPWCGVRFDTRTCEVMANYSRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGPAGNASLLSNGALETTAYAYSLIQNRSNRRNGSFGTSRGVRCVCKIHRSEVTWLGLHAFREVFGAFAMKDRGFARCKLDVERALRETAGSRGGGFEGFSRKIR-KGKEGAAAAGCEEGATSDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 303
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A6H5K5W1_9PHAE (Telomerase reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W1_9PHAE) HSP 1 Score: 332 bits (851), Expect = 8.730e-107 Identity = 178/262 (67.94%), Postives = 204/262 (77.86%), Query Frame = 1 Query: 1 QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSRQ----GEGDAREGEAQRGRKAKNPQLGVIRD--YARLRKVVGSSDAICLLQTLTS 765 Q+R++EG +FPWCGVRFDT+TCEV+ANYSR+ K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE G+NSR TVLLNVYEM+LVCAAKTA SALRLPRGP GN SLLSNGA++TT+YAYSLIQSRSNRRKG FGTS+G++CVCKIHRFEVTWLGLHAFREVF AF+ K RGF KL + AL E G G SR+ EG A G G + Q GV R Y RLR+VV S DA+ LLQTLTS Sbjct: 413 QVRRVEGDMFPWCGVRFDTRTCEVMANYSRYSKTGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGPAGNASLLSNGALETTAYAYSLIQSRSNRRKGSFGTSRGVRCVCKIHRFEVTWLGLHAFREVFGAFARKDRGFARCKLDVERALRETAGFWGGGFDGFSRKMCKGKEGAAAAG--WEGGATPDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 672
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: D7G4G6_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G6_ECTSI) HSP 1 Score: 327 bits (839), Expect = 5.000e-103 Identity = 175/261 (67.05%), Postives = 205/261 (78.54%), Query Frame = 1 Query: 1 QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSR---QGEGDAREGEAQRGRKAKNPQLGVIRDYA--RLRKVVGSSDAICLLQTLTS 765 Q+R++EG +FPWCGVRFDT+TCEV+ANYSR+ K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE G+NSR TVLLNVYEM+LVCAAKTA SALRLPRG GN SLLSNGA++TT+YAYSLIQSRSNRRKG FGTS+G++CVCKIHRFEVTWLGLHAFREVF AF+ K RGF KL + AL E G G + SR QG+ A + G + + Q GV R A RL++VV S DA+ LLQTLTS Sbjct: 612 QVRRVEGDMFPWCGVRFDTRTCEVMANYSRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGAAGNASLLSNGALETTAYAYSLIQSRSNRRKGSFGTSRGVRCVCKIHRFEVTWLGLHAFREVFGAFAMKDRGFARCKLDVERALRETAGSRGGGFEGFSRKVRQGKEGAAAAGCEEGATS-DTQHGVRRGRAHGRLQRVVRSPDALSLLQTLTS 871
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: D7G5Y0_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y0_ECTSI) HSP 1 Score: 263 bits (672), Expect = 2.210e-85 Identity = 148/231 (64.07%), Postives = 174/231 (75.32%), Query Frame = 1 Query: 91 FFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSRQGEGDAREGEAQRGRKAK---NPQLGVIRD--YARLRKVVGSSDAICLLQTLTS 765 + K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE G+NSR TVLLNVYEM+LVCAAKTA SALRLPRGP GN SLLSNGA++TT+YAYSLIQ+RSNRR G FGTS+G++CVCK HRF+VTW+GL AFREVF AF K RGF KL + AL E G G + SR+ +EG A G + + + Q GV R Y RLR+VV S DA+ LLQTLTS Sbjct: 7 YSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGPAGNASLLSNGALETTAYAYSLIQNRSNRRNGSFGTSRGVRCVCKNHRFQVTWVGLPAFREVFGAFPMKDRGFARCKLHVESALRETAGSRGGGFEGFSRKIR-KGKEGAAAAGWEEEATPDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 236
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: UPI001B7DD0ED (telomerase reverse transcriptase n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DD0ED) HSP 1 Score: 87.8 bits (216), Expect = 5.780e-16 Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 16 EGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVE-SRRAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPG--GNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAF 495 E TLFPWCG+ FDT+T EV +YS + +SV S+T S AG+ L K+ + KCH + LD VN+ +TV +NVY++ L+ A + A LRLP G G N S D + YS++++++ GF + G H WL HAF Sbjct: 1259 EHTLFPWCGLLFDTQTLEVYCDYSSYANTSVRSSLTFNCSSEAGKNLRRKLLAVLRLKCHHIFLD---LEVNTLRTVSINVYKIFLLQAYRFHACVLRLPFGQGVRDNPSFFLEVISDMVACCYSILKAKNRGIPLGFKDASGPFPYEAAH-----WLCCHAF 1413
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: UPI001CF1D80F (telomerase reverse transcriptase-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1D80F) HSP 1 Score: 87.4 bits (215), Expect = 7.770e-16 Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 1 Query: 1 QIRQIE-GTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVE-SRRAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRG--PGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFR 498 Q+++IE FPWCG FDT T EV + SR+ + ++++V G+ L K+ + PKCH L+LD G +NSR+++LL VY+ L+ A K A A P G P N S +D Y ++ S+R+ +SK ++ EVTWL LHAF+ Sbjct: 1205 QVKRIEQNERFPWCGFLFDTVTLEVRCDISRYHGIQLRDTLSVSLDAHPGKALRRKLLCSVRPKCHPLLLDPG---LNSRESILLTVYQSFLLTAKKFCAYAKEFPLGGQPKDNPSFFCKLFLDLAQYFHAT----SSRKCRQLSSSKA---SFSLNEGEVTWLCLHAFK 1364
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A649UFI1_AMBME (Telomerase reverse transcriptase n=1 Tax=Ambystoma mexicanum TaxID=8296 RepID=A0A649UFI1_AMBME) HSP 1 Score: 86.7 bits (213), Expect = 1.410e-15 Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 22 TLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESR-RAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLP--RGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVT-WLGLHAF 495 ++FPWCGV FDT+T EV +YSR+ +S+ S+T+ + G + K+ R + KC ++ LD VNS +TV +N+Y++ L+ A + A ++LP +G N S + D YS+++S++ G + G + C FE WL HAF Sbjct: 1142 SVFPWCGVLFDTQTLEVYCDYSRYACTSIRSSLTISHKAETGTSMRHKLIRVLKLKCKSIFLD---LMVNSLRTVFINIYKIFLLQAYRFHACVIQLPFNQGVRKNPSFFLSVISDMAPCCYSILKSKN------IGIALGTKDACNTFPFEAAQWLSYHAF 1294
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A8B7PXA5_HIPAR (Telomerase reverse transcriptase n=2 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7PXA5_HIPAR) HSP 1 Score: 80.5 bits (197), Expect = 1.710e-13 Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 25 LFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESR-RAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAI------DTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLE 576 LFPWCG+ DT+T EV+ +YS + ++S+ S+T +AG + K+ + + KCH+L LD VNS Q V NV+++ L+ A + A L+LP N + N A DT S Y+L+++++ G + G V WL LHAF S S ++ P A L + Sbjct: 921 LFPWCGLLLDTRTLEVLCDYSSYARTSIRASLTFSRGFKAGRSMRRKLFKVLRLKCHSLFLD---LQVNSLQMVCTNVHKIFLLQAYRFHACVLQLPF----NQQVRKNPAFFLRVISDTASRCYALLKAKNTGMLLGAKGAAG-----PFPSEAVKWLCLHAFLLKLSRHSVTYKCLLGPLQAAQSQLCQ 1099
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A401NGG8_SCYTO (Telomerase reverse transcriptase n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401NGG8_SCYTO) HSP 1 Score: 79.3 bits (194), Expect = 4.310e-13 Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 22 TLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESR-RAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPG--GNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKG 435 +LFPWCG+ FDT+T EV +YS + +S+ S+T R AGE L K+ + KC + LD VN+ +TV +NVY++ L+ A + A LRLP G G N S D + YS++++++ G+ + G Sbjct: 1074 SLFPWCGLLFDTQTLEVYCDYSSYANTSIRSSLTFNCRPEAGENLRRKLLAVLKLKCQHIFLD---LEVNTLRTVSINVYKIFLLQAYRFHACVLRLPFGRGVRDNPSFFLGVVSDMVACCYSILKAKNRGILLGYKDASG 1211
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: UPI0009A333D9 (telomerase reverse transcriptase n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A333D9) HSP 1 Score: 79.0 bits (193), Expect = 5.940e-13 Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 16 EGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVE-SRRAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPG--GNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKG 435 E +LFPWCG+ FDT+T EV +YS + +S+ S+T S AG+ L K+ + KCH + LD VN+ +TV +NVY++ L+ A + A LRLP G N S D YS++++++ GF + G Sbjct: 1247 EHSLFPWCGLLFDTQTLEVYCDYSSYANTSIRSSLTFSCSSEAGKNLRRKLLAVLKLKCHHIFLD---LEVNTLRTVNINVYKLFLLQAYRFHACVLRLPFGQRVRDNPSFFLEVISDMAVCCYSILKAKNRGIPLGFKDAAG 1386 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13568.2203.1 >prot_H-paniculata_contig13568.2203.1 ID=prot_H-paniculata_contig13568.2203.1|Name=mRNA_H-paniculata_contig13568.2203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECback to top mRNA from alignment at H-paniculata_contig13568:1942..5027+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13568.2203.1 ID=mRNA_H-paniculata_contig13568.2203.1|Name=mRNA_H-paniculata_contig13568.2203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3086bp|location=Sequence derived from alignment at H-paniculata_contig13568:1942..5027+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13568:1942..5027+ >mRNA_H-paniculata_contig13568.2203.1 ID=mRNA_H-paniculata_contig13568.2203.1|Name=mRNA_H-paniculata_contig13568.2203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig13568:1942..5027+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |