prot_H-paniculata_contig13554.2198.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13554.2198.1
Unique Nameprot_H-paniculata_contig13554.2198.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length383
Homology
BLAST of mRNA_H-paniculata_contig13554.2198.1 vs. uniprot
Match: A0A6H5KUC4_9PHAE (Apt1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC4_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.080e-27
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0
Query:   16 MGQGTVQGWVGLDPVEEASIVMKHKPHQKEDEMESCRLQCLAQRLLSTFREAVTVSLESTMLSAAPSDVDLDAGVQWLPDSALTPP 101
            M QG +QGWVGLDPVEE  I    K   + D +ESCRLQCLAQRLL+TFREAVTV LE TMLSAAP+DVD+DAGVQWLPDSAL PP
Sbjct:    1 MEQGVIQGWVGLDPVEEGVIAASPK---QGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSALAPP 83          
BLAST of mRNA_H-paniculata_contig13554.2198.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.460e-21
Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 QLLGSETARASLLYSMGQGTVQGWVGLDPVEEASIVMKHKPHQKEDEMESCRLQCLAQRLLSTFREAVTVSLESTMLSAAPS 82
            QLLGSETARA+LL+SM QG +QGWVGLDPVEE  +  + K   + D  ES RLQCLAQRLL+TFREAVTV LE TMLSAAP+
Sbjct: 3248 QLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLK---QGDVAESYRLQCLAQRLLTTFREAVTVGLEGTMLSAAPT 3326          
BLAST of mRNA_H-paniculata_contig13554.2198.1 vs. uniprot
Match: A0A835Z2Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Z4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.700e-18
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0
Query:    1 QLLGSETARASLLYSMGQGTVQGWVGLDPVEEASIVMKHKPHQKEDEMESCRLQCLAQRLLSTFREAVTVSLESTMLSAAPSDVDLDAGVQWLPDSALT 99
            QLL  + +++S+++S+  G VQGWVGLDP           P    D     RLQCLAQRLL+TF E +T++++  M+SAAP+DVD+ AGV WLP+SALT
Sbjct: 1444 QLLDEDVSKSSVIFSLEHGAVQGWVGLDP---------GAPPCAADAQRRRRLQCLAQRLLTTFEETITIAVQGVMISAAPTDVDVGAGVTWLPESALT 1533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13554.2198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KUC4_9PHAE1.080e-2774.42Apt1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G7K0_ECTSI1.460e-2170.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z2Z4_9STRA1.700e-1849.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13554contigH-paniculata_contig13554:1819..6747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13554.2198.1mRNA_H-paniculata_contig13554.2198.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13554 1818..6747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13554.2198.1 ID=prot_H-paniculata_contig13554.2198.1|Name=mRNA_H-paniculata_contig13554.2198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=383bp
QLLGSETARASLLYSMGQGTVQGWVGLDPVEEASIVMKHKPHQKEDEMES
CRLQCLAQRLLSTFREAVTVSLESTMLSAAPSDVDLDAGVQWLPDSALTP
PQPRCPPPPPRSTAKTTTAKARTPKRTNRKPRVARSRSPVNNVPRVDDRK
TTATSTAAAPAAIALAATTGRVRPSGGDLDGAVSQGVTAPAMAGAARMAE
NGCSVAESSGASGQLYYEARSEEEQLENDRIRSHRLAREKAIDDDNDDDS
IVFTPALTMLSSSDYSSPPSARRAPSPVFGTGEWAAAGGGGDGGENDSGF
GGDSFDHLSHHSMTHGGTIPLEFDMQPADFSSLRVDINADTAVGSGGGGG
GRDRDGRGRDGLSMRELFLHDGYSQGNCSGGGG
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