prot_H-paniculata_contig13547.2193.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13547.2193.1
Unique Nameprot_H-paniculata_contig13547.2193.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length560
Homology
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 1.700e-138
Identity = 218/380 (57.37%), Postives = 273/380 (71.84%), Query Frame = 0
Query:  130 SAPPLPPPTAGEGDDGLEHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQK-------QLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVE--ADDLAAARR-LSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDMWDPASTILRASGTPEQRREFEGLQELR 499
            +AP  P  T     + +    VS ED+ APIDW+LSRR+  +SRR+YRK +E G VKV+G+ V + +RV  G+ ISV +G                          L+FPQRLP L+V+FED+H F V KPAG++CQPC  A +GTVLHGL+ HMV++GQ++  AD +AAA   LSQGIV RLDK TSG+M+VAKTL ASSK S LF+ GKVKK+YLA+CHGDPG DS+VD PLYRRSSGKV AV   +AE + A+E  TR++NVA+  G+SLC+A+ILTGRMHQVRVHL+W GCPIVGD+EYGD  AN RV++RS +R   +RPLLHS++LEF+HP TNKPM F + MP DMW+ A  ILR SGTPEQ+  F  LQELR
Sbjct:  116 AAPARPAATEDGNTNAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELR 495          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.000e-65
Identity = 142/376 (37.77%), Postives = 202/376 (53.72%), Query Frame = 0
Query:  147 EHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHG------------DPGLDSL----VDVPLYRRSSGKVAAVHKED----------AERYGARETVTRIQNVAS-------------IGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEY---GDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDMWDPASTIL 480
            E + V QED NAPIDW+LSR++   SRR++RK++ +G V+++G+   +LVRV  G TI+V         A   +  +    + L  Q L  L V++EDEH   V KP G+V QP     +GT+L+G+L HMV  G+  A D  AA+ L QG+VHRLD+ TSG++IVAK LEASS  S +FK  KV K YLA+  G            D G D      +D PLY+R+SGK+A    +           A     +  +TR++ +                GG+   + EI TGR HQ+R HL   G P++GD  Y   GD  A    AR +   +   RPLLH+++L   HP+TN  +  ++ +P DMW   S ++
Sbjct:    6 ERITVEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITV---------AAAAADAVAPPSEQLPAQDL-KLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVV 367          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 209 bits (533), Expect = 1.060e-58
Identity = 125/328 (38.11%), Postives = 184/328 (56.10%), Query Frame = 0
Query:  151 VSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQ-VEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASI----GGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDMW 473
            V  E++ AP+DW L+      SRRY+RK+I++G VKVNGKTV +  ++  G  + +++      + G  +                SL VLFED+   AV KPAGVVC P +  K GTVL+GLL H ++  Q V A+ +     LS+GIVHRLDK TSGVMI AK  +A+ K S  F+  +  K YL +C+G     ++V+ P+YR  +GK+A + K+      +   V   ++V        G+SL + E++TGRMHQ R+HL++ G PI+GD  YG      RV + +   +   R LLH+  L   HP T + +   + +P+DMW
Sbjct:   62 VDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIEDFAKEIEGAEN---------------LSLSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQQVFANSIET---LSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYGLA----RVNKDAYQDLGVDRALLHASRLIVQHPRTGEKLDLSAPVPSDMW 367          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA)

HSP 1 Score: 190 bits (482), Expect = 8.900e-51
Identity = 136/397 (34.26%), Postives = 196/397 (49.37%), Query Frame = 0
Query:  146 LEHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVK----------AGQVEA-------DDLAAARR----------------------------LSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGD--PGLDSLVDVPLYRRSSGKVAAVHKE----------------------DAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHL-QWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            ++   V ++DD+ P+D +L+R+    SRR++RK I+ G VKV+ K V +L ++  G  +S +                  +K  + P+ L  L+VLFEDEH  AV KP G++  P E  + GTVLHG+L  +            A Q E        +D    R+                            L+QG+VHRLD  TSGV++VAK   A+   +  F+   VKK+Y+A+  GD  PG+  L  +PL R SSGK+A   +                       +A+  GAR   T ++ +A+ G +S+  AEILTGRMHQ+RVHL Q   CP++GD  YGD   N R  R    +V   R LLH+ +LEF HPIT K +   + +P DM
Sbjct:   52 VQTFVVGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQLVSAQF--------------KPDEKPSMEPEDL-GLEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKRSENLQV--SRTLLHAHSLEFTHPITGKHVSLSTPVPLDM 430          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 182 bits (461), Expect = 4.140e-48
Identity = 116/337 (34.42%), Postives = 175/337 (51.93%), Query Frame = 0
Query:  143 DDGL--EHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAAR---RLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVD--VPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            DD L  E + V +E +   +D  LS      SR Y+    ++G V+V G+ V +  ++  G  +SV                L   +    P+ +P L +L+EDEH  AV KP G+V  P  G+  GT  + L  HM   G+    D  AA     L  GIVHRLDK TSGV++ +K  +  +K S +F   K+KK YLA+C G+PG D  ++  +  + ++  K+  +H+       AR  VT +  ++    +SL + +I TGR HQ+RVHL  +  P++GD+ YG+   N    RR+  R   +RPLLH+  LE  HPIT +P+   + +P DM
Sbjct:   61 DDDLQEETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAF--------------LPTAEMAAEPEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGE----DYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQN----RRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDM 374          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 181 bits (460), Expect = 6.030e-48
Identity = 118/315 (37.46%), Postives = 169/315 (53.65%), Query Frame = 0
Query:  160 IDWILSRRMAVNSRRYYRKEIEEGGVKVNGKT-VTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYG-ARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            ID  L  ++   SR Y+     +G V VNG + V +  +V  G  ISV+               L   +  L P+ +P L V+FED    A+ KP G+V  P  G   GT ++ LL H+ K G V +  L  +  L  G+VHRLDK TSGV++ AKT     + S LF D KV+K YLA+C G+PG D  +DVP+ R ++ +   V   D +    AR  ++ ++  A  G +S+ +  I TGR HQ+RVHLQ +  PIVGD+ YG+   N R+ +R        RPLLH++ LEF HP T   ++  + +P DM
Sbjct:   67 IDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRF--------------LATAELNLGPEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVS--LGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRG-----ISRPLLHALRLEFTHPTTGAALRLEAPLPEDM 358          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A0H5E3K8_9BACT (Pseudouridine synthase n=1 Tax=Estrella lausannensis TaxID=483423 RepID=A0A0H5E3K8_9BACT)

HSP 1 Score: 174 bits (440), Expect = 5.060e-46
Identity = 112/332 (33.73%), Postives = 169/332 (50.90%), Query Frame = 0
Query:  146 LEHLAVSQEDDNAPIDWILSRRMA-VNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPL----YRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            LE + +++ +    +D IL+ R   V SR Y++   +EG V VNG  V +  R   G  + V+               +   +  L  + +P L++L+EDE   A+ KP G+V  P  G   GTV++ LL H  +  +    +      +  GIVHRLDK TSGV++ AK+     K  +LF   +V KEYLA+C G+PG   ++D P+    Y R   KV           G +  VT  + +A+ G +SL K  + TGR HQ+RVH+Q K  P++GD  YG    N +          A+R LLH+  L F+HP+T KP+ F + +P D+
Sbjct:   10 LEEVLIAESEAGERLDKILAGRFKDVKSRTYFQYLFQEGKVSVNGLPVKKQYRPRTGDLVEVQF--------------ILTPELNLAAENIP-LRILYEDESLIAIDKPPGMVVHPAPGNWSGTVVNALLFHCTRLKEEFQQE-----HIRPGIVHRLDKETSGVLLAAKSHSMHGKLVDLFSSRQVYKEYLAVCLGNPGR-GIIDKPIGRDPYHRKQMKVLDE--------GGKRAVTEFETLATDGQVSLVKIILKTGRTHQIRVHMQSKNAPVLGDSLYGSIAVNKKWK--------AERQLLHAYRLSFLHPMTKKPITFQAPLPPDL 304          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A1F8JQK3_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 TaxID=1797605 RepID=A0A1F8JQK3_9BACT)

HSP 1 Score: 173 bits (438), Expect = 8.160e-46
Identity = 118/326 (36.20%), Postives = 163/326 (50.00%), Query Frame = 0
Query:  147 EHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            + L V+ E++   ID +L  R   +SR Y++  IE G V +NG+ V + +    G  I V    +               +  L P+ +P L +L+EDEH  AV KPAG+V  P  G   GT ++ LL H  +          ++  L  GIVHRLDK TSGV+I AKTL A  K   +F   +++K YLAIC+G P  +  +++P+     G+     KE A     RE +T +Q  A     SL      TGR HQ+RVHL+  GCPIVGD  YG    +             KR LLH+  L F HPIT  P+K  + +P DM
Sbjct:   12 DFLFVTAEEEGMRIDTLLGCRFPDHSRTYFQYLIESGFVLLNGEPVKKRILPEEGDEIEVCFQATA--------------EASLEPESIP-LDILYEDEHILAVNKPAGMVVHPAPGHWSGTFVNALLGHCREIAP-------SSDPLRPGIVHRLDKDTSGVLIAAKTLIAHQKLIEMFSSRRIEKLYLAICYGRPQ-NGTINIPI-----GRHPVHRKEMAALPDGREAITEVQTAAFNEKTSLVLLRPKTGRTHQLRVHLKHIGCPIVGDPVYGKKTDSP------------KRQLLHAYRLAFEHPITRAPIKLTAPLPQDM 297          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A486XP91_9BACT (Pseudouridine synthase n=3 Tax=Chlamydiae TaxID=204428 RepID=A0A486XP91_9BACT)

HSP 1 Score: 172 bits (437), Expect = 9.950e-46
Identity = 114/321 (35.51%), Postives = 166/321 (51.71%), Query Frame = 0
Query:  152 SQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            S E+ +  +D +LS R    SR Y++  I++G V VNGK V +  R   G  I +                 Q   ++        L++L+EDEH   + KPAG+V  P  G  +GT ++ LL H     Q+++DD      L  GIVHRLDK TSG++I AKT  A +   +LF   K++K YLAIC G P  + L+D P+ R  S +     KE       R + T  Q +A    +S  K E+LTGR HQ+RVHL+  G PI+GD+ YG+   N + +         KR LLH+  ++F HPIT + +   + +P D+
Sbjct:   11 SLEESHLRLDALLSLRFPDKSRSYFQFLIKQGYVLVNGKAVKKRERAKPGDEIEIYF---------------QITPEIDLTPESIDLEILYEDEHLIVINKPAGMVVHPAPGHYRGTFVNALLFH---CKQIDSDD-----PLRPGIVHRLDKDTSGILIAAKTRAAHTGLIDLFAKRKIEKTYLAICIGTPR-EGLIDAPIARHLSRR-----KEMTICMQGRASKTICQVLAQNSSLSFVKLELLTGRTHQLRVHLKHIGTPILGDETYGNSTINKKFS--------TKRQLLHAYFIKFFHPITQQILSLTAPIPEDL 294          
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA)

HSP 1 Score: 171 bits (432), Expect = 7.880e-45
Identity = 117/333 (35.14%), Postives = 168/333 (50.45%), Query Frame = 0
Query:  143 DDGLEHLAVSQEDDNAPIDWILSRR-MAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAE--RYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 472
            D  +    VS  +  + +D +LS+R     SR Y++K I    V +NG+ V + VR   G  + V+   +               +  L P+ LP L+VL+ED+H   + K AG+V  P  G   GT ++ LL H   + Q EA        L  GIVHRLDK+TSG ++ AK L    +   LF   K+ KEY+A+C G+PG D  VDVP+ R        VH++       G R  VT    +A    +S+ K  + TGR HQ+RVHL+ +G PI+GD  YG    N       QY   A R +LH+  L F+HPIT + +  ++ +P DM
Sbjct:   18 DPEINTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTP--------------EVNLHPENLP-LEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEAS-------LRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPG-DGTVDVPIGRHP------VHRKQMAVIESGGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMN------RQYS--ASRQMLHAYRLRFMHPITGEKLDVMAPIPVDM 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE1.700e-13857.37S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA2.000e-6537.77Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK1.060e-5838.11Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S2USK5_9STRA8.900e-5134.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXK7_HETAK4.140e-4834.42Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A836CH15_9STRA6.030e-4837.46Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A0H5E3K8_9BACT5.060e-4633.73Pseudouridine synthase n=1 Tax=Estrella lausannens... [more]
A0A1F8JQK3_9BACT8.160e-4636.20Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A486XP91_9BACT9.950e-4635.51Pseudouridine synthase n=3 Tax=Chlamydiae TaxID=20... [more]
A0A212KRQ0_9CHLA7.880e-4535.14Pseudouridine synthase n=1 Tax=Chlamydiales bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 238..480
e-value: 4.8E-56
score: 191.7
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 160..478
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 160..478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..559
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.669
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 154..194
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 161..193
e-value: 4.7E-6
score: 26.2
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 158..233
score: 9.785
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 147..210
e-value: 1.7E-6
score: 29.4
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 246..411
e-value: 1.1E-29
score: 103.6
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 157..474
e-value: 8.5E-59
score: 197.2
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 299..313
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 235..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13547contigH-paniculata_contig13547:2300..5922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13547.2193.1mRNA_H-paniculata_contig13547.2193.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13547 2177..5996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13547.2193.1 ID=prot_H-paniculata_contig13547.2193.1|Name=mRNA_H-paniculata_contig13547.2193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=560bp
MMVSYWSIARVMLLVSLGDLLVAGFLSTSPASAAPGTRLQRMALSRKVGS
QIRHARRRPHVYRMSADAKISNGEVGVIDQLDLSILQDLGGAVTAAGIRS
QRGASDTAAVDVLLSTTATKAVASAALMESAPPLPPPTAGEGDDGLEHLA
VSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAG
GSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAV
QKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVH
RLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVD
VPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTG
RMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMT
LEFVHPITNKPMKFLSAMPNDMWDPASTILRASGTPEQRREFEGLQELRL
MTPEDKAAAEARAVQDGRRAAAAARVKRLSRGQGMGGSAAARAASAAVAA
LGRGGQTPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR006225PsdUridine_synth_RluC/D
IPR006224PsdUridine_synth_RluC/D_CS
IPR020103PsdUridine_synth_cat_dom_sf