mRNA_H-paniculata_contig13547.2193.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE) HSP 1 Score: 422 bits (1084), Expect = 1.410e-137 Identity = 218/380 (57.37%), Postives = 273/380 (71.84%), Query Frame = 3 Query: 462 SAPPLPPPTAGEGDDGLEHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQK-------QLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVE--ADDLAAARR-LSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDMWDPASTILRASGTPEQRREFEGLQELR 1571 +AP P T + + VS ED+ APIDW+LSRR+ +SRR+YRK +E G VKV+G+ V + +RV G+ ISV +G L+FPQRLP L+V+FED+H F V KPAG++CQPC A +GTVLHGL+ HMV++GQ++ AD +AAA LSQGIV RLDK TSG+M+VAKTL ASSK S LF+ GKVKK+YLA+CHGDPG DS+VD PLYRRSSGKV AV +AE + A+E TR++NVA+ G+SLC+A+ILTGRMHQVRVHL+W GCPIVGD+EYGD AN RV++RS +R +RPLLHS++LEF+HP TNKPM F + MP DMW+ A ILR SGTPEQ+ F LQELR Sbjct: 116 AAPARPAATEDGNTNAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELR 495
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA) HSP 1 Score: 230 bits (586), Expect = 8.580e-65 Identity = 142/376 (37.77%), Postives = 202/376 (53.72%), Query Frame = 3 Query: 513 EHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHG------------DPGLDSL----VDVPLYRRSSGKVAAVHKED----------AERYGARETVTRIQNVAS-------------IGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEY---GDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDMWDPASTIL 1514 E + V QED NAPIDW+LSR++ SRR++RK++ +G V+++G+ +LVRV G TI+V A + + + L Q L L V++EDEH V KP G+V QP +GT+L+G+L HMV G+ A D AA+ L QG+VHRLD+ TSG++IVAK LEASS S +FK KV K YLA+ G D G D +D PLY+R+SGK+A + A + +TR++ + GG+ + EI TGR HQ+R HL G P++GD Y GD A AR + + RPLLH+++L HP+TN + ++ +P DMW S ++ Sbjct: 6 ERITVEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITV---------AAAAADAVAPPSEQLPAQDL-KLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVV 367
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK) HSP 1 Score: 209 bits (533), Expect = 3.960e-58 Identity = 125/328 (38.11%), Postives = 184/328 (56.10%), Query Frame = 3 Query: 525 VSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQ-VEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASI----GGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDMW 1493 V E++ AP+DW L+ SRRY+RK+I++G VKVNGKTV + ++ G + +++ + G + SL VLFED+ AV KPAGVVC P + K GTVL+GLL H ++ Q V A+ + LS+GIVHRLDK TSGVMI AK +A+ K S F+ + K YL +C+G ++V+ P+YR +GK+A + K+ + V ++V G+SL + E++TGRMHQ R+HL++ G PI+GD YG RV + + + R LLH+ L HP T + + + +P+DMW Sbjct: 62 VDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIEDFAKEIEGAEN---------------LSLSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQQVFANSIET---LSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYGLA----RVNKDAYQDLGVDRALLHASRLIVQHPRTGEKLDLSAPVPSDMW 367
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.840e-50 Identity = 136/397 (34.26%), Postives = 196/397 (49.37%), Query Frame = 3 Query: 510 LEHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVK----------AGQVEA-------DDLAAARR----------------------------LSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGD--PGLDSLVDVPLYRRSSGKVAAVHKE----------------------DAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHL-QWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 ++ V ++DD+ P+D +L+R+ SRR++RK I+ G VKV+ K V +L ++ G +S + +K + P+ L L+VLFEDEH AV KP G++ P E + GTVLHG+L + A Q E +D R+ L+QG+VHRLD TSGV++VAK A+ + F+ VKK+Y+A+ GD PG+ L +PL R SSGK+A + +A+ GAR T ++ +A+ G +S+ AEILTGRMHQ+RVHL Q CP++GD YGD N R R +V R LLH+ +LEF HPIT K + + +P DM Sbjct: 52 VQTFVVGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQLVSAQF--------------KPDEKPSMEPEDL-GLEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKRSENLQV--SRTLLHAHSLEFTHPITGKHVSLSTPVPLDM 430
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK) HSP 1 Score: 182 bits (461), Expect = 1.230e-47 Identity = 116/337 (34.42%), Postives = 175/337 (51.93%), Query Frame = 3 Query: 501 DDGL--EHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAAR---RLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVD--VPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 DD L E + V +E + +D LS SR Y+ ++G V+V G+ V + ++ G +SV L + P+ +P L +L+EDEH AV KP G+V P G+ GT + L HM G+ D AA L GIVHRLDK TSGV++ +K + +K S +F K+KK YLA+C G+PG D ++ + + ++ K+ +H+ AR VT + ++ +SL + +I TGR HQ+RVHL + P++GD+ YG+ N RR+ R +RPLLH+ LE HPIT +P+ + +P DM Sbjct: 61 DDDLQEETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAF--------------LPTAEMAAEPEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGE----DYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQN----RRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDM 374
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.780e-47 Identity = 118/315 (37.46%), Postives = 169/315 (53.65%), Query Frame = 3 Query: 552 IDWILSRRMAVNSRRYYRKEIEEGGVKVNGKT-VTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYG-ARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 ID L ++ SR Y+ +G V VNG + V + +V G ISV+ L + L P+ +P L V+FED A+ KP G+V P G GT ++ LL H+ K G V + L + L G+VHRLDK TSGV++ AKT + S LF D KV+K YLA+C G+PG D +DVP+ R ++ + V D + AR ++ ++ A G +S+ + I TGR HQ+RVHLQ + PIVGD+ YG+ N R+ +R RPLLH++ LEF HP T ++ + +P DM Sbjct: 67 IDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRF--------------LATAELNLGPEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVS--LGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRG-----ISRPLLHALRLEFTHPTTGAALRLEAPLPEDM 358
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A0H5E3K8_9BACT (Pseudouridine synthase n=1 Tax=Estrella lausannensis TaxID=483423 RepID=A0A0H5E3K8_9BACT) HSP 1 Score: 174 bits (440), Expect = 1.390e-45 Identity = 112/332 (33.73%), Postives = 169/332 (50.90%), Query Frame = 3 Query: 510 LEHLAVSQEDDNAPIDWILSRRMA-VNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPL----YRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 LE + +++ + +D IL+ R V SR Y++ +EG V VNG V + R G + V+ + + L + +P L++L+EDE A+ KP G+V P G GTV++ LL H + + + + GIVHRLDK TSGV++ AK+ K +LF +V KEYLA+C G+PG ++D P+ Y R KV G + VT + +A+ G +SL K + TGR HQ+RVH+Q K P++GD YG N + A+R LLH+ L F+HP+T KP+ F + +P D+ Sbjct: 10 LEEVLIAESEAGERLDKILAGRFKDVKSRTYFQYLFQEGKVSVNGLPVKKQYRPRTGDLVEVQF--------------ILTPELNLAAENIP-LRILYEDESLIAIDKPPGMVVHPAPGNWSGTVVNALLFHCTRLKEEFQQE-----HIRPGIVHRLDKETSGVLLAAKSHSMHGKLVDLFSSRQVYKEYLAVCLGNPGR-GIIDKPIGRDPYHRKQMKVLDE--------GGKRAVTEFETLATDGQVSLVKIILKTGRTHQIRVHMQSKNAPVLGDSLYGSIAVNKKWK--------AERQLLHAYRLSFLHPMTKKPITFQAPLPPDL 304
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A1F8JQK3_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 TaxID=1797605 RepID=A0A1F8JQK3_9BACT) HSP 1 Score: 173 bits (438), Expect = 2.220e-45 Identity = 118/326 (36.20%), Postives = 163/326 (50.00%), Query Frame = 3 Query: 513 EHLAVSQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 + L V+ E++ ID +L R +SR Y++ IE G V +NG+ V + + G I V + + L P+ +P L +L+EDEH AV KPAG+V P G GT ++ LL H + ++ L GIVHRLDK TSGV+I AKTL A K +F +++K YLAIC+G P + +++P+ G+ KE A RE +T +Q A SL TGR HQ+RVHL+ GCPIVGD YG + KR LLH+ L F HPIT P+K + +P DM Sbjct: 12 DFLFVTAEEEGMRIDTLLGCRFPDHSRTYFQYLIESGFVLLNGEPVKKRILPEEGDEIEVCFQATA--------------EASLEPESIP-LDILYEDEHILAVNKPAGMVVHPAPGHWSGTFVNALLGHCREIAP-------SSDPLRPGIVHRLDKDTSGVLIAAKTLIAHQKLIEMFSSRRIEKLYLAICYGRPQ-NGTINIPI-----GRHPVHRKEMAALPDGREAITEVQTAAFNEKTSLVLLRPKTGRTHQLRVHLKHIGCPIVGDPVYGKKTDSP------------KRQLLHAYRLAFEHPITRAPIKLTAPLPQDM 297
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A486XP91_9BACT (Pseudouridine synthase n=3 Tax=Chlamydiae TaxID=204428 RepID=A0A486XP91_9BACT) HSP 1 Score: 172 bits (437), Expect = 2.700e-45 Identity = 114/321 (35.51%), Postives = 166/321 (51.71%), Query Frame = 3 Query: 528 SQEDDNAPIDWILSRRMAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAERYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 S E+ + +D +LS R SR Y++ I++G V VNGK V + R G I + Q ++ L++L+EDEH + KPAG+V P G +GT ++ LL H Q+++DD L GIVHRLDK TSG++I AKT A + +LF K++K YLAIC G P + L+D P+ R S + KE R + T Q +A +S K E+LTGR HQ+RVHL+ G PI+GD+ YG+ N + + KR LLH+ ++F HPIT + + + +P D+ Sbjct: 11 SLEESHLRLDALLSLRFPDKSRSYFQFLIKQGYVLVNGKAVKKRERAKPGDEIEIYF---------------QITPEIDLTPESIDLEILYEDEHLIVINKPAGMVVHPAPGHYRGTFVNALLFH---CKQIDSDD-----PLRPGIVHRLDKDTSGILIAAKTRAAHTGLIDLFAKRKIEKTYLAICIGTPR-EGLIDAPIARHLSRR-----KEMTICMQGRASKTICQVLAQNSSLSFVKLELLTGRTHQLRVHLKHIGTPILGDETYGNSTINKKFS--------TKRQLLHAYFIKFFHPITQQILSLTAPIPEDL 294
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA) HSP 1 Score: 171 bits (432), Expect = 2.100e-44 Identity = 117/333 (35.14%), Postives = 168/333 (50.45%), Query Frame = 3 Query: 501 DDGLEHLAVSQEDDNAPIDWILSRR-MAVNSRRYYRKEIEEGGVKVNGKTVTQLVRVAGGSTISVKMGTSTGNVAGGTSGGLQKQKQLLFPQRLPSLKVLFEDEHFFAVQKPAGVVCQPCEGAKQGTVLHGLLDHMVKAGQVEADDLAAARRLSQGIVHRLDKHTSGVMIVAKTLEASSKFSNLFKDGKVKKEYLAICHGDPGLDSLVDVPLYRRSSGKVAAVHKEDAE--RYGARETVTRIQNVASIGGISLCKAEILTGRMHQVRVHLQWKGCPIVGDKEYGDFVANDRVARRSQYRVVAKRPLLHSMTLEFVHPITNKPMKFLSAMPNDM 1490 D + VS + + +D +LS+R SR Y++K I V +NG+ V + VR G + V+ + + L P+ LP L+VL+ED+H + K AG+V P G GT ++ LL H + Q EA L GIVHRLDK+TSG ++ AK L + LF K+ KEY+A+C G+PG D VDVP+ R VH++ G R VT +A +S+ K + TGR HQ+RVHL+ +G PI+GD YG N QY A R +LH+ L F+HPIT + + ++ +P DM Sbjct: 18 DPEINTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTP--------------EVNLHPENLP-LEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEAS-------LRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPG-DGTVDVPIGRHP------VHRKQMAVIESGGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMN------RQYS--ASRQMLHAYRLRFMHPITGEKLDVMAPIPVDM 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13547.2193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13547.2193.1 >prot_H-paniculata_contig13547.2193.1 ID=prot_H-paniculata_contig13547.2193.1|Name=mRNA_H-paniculata_contig13547.2193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=560bp MMVSYWSIARVMLLVSLGDLLVAGFLSTSPASAAPGTRLQRMALSRKVGSback to top mRNA from alignment at H-paniculata_contig13547:2177..5996- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13547.2193.1 ID=mRNA_H-paniculata_contig13547.2193.1|Name=mRNA_H-paniculata_contig13547.2193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3820bp|location=Sequence derived from alignment at H-paniculata_contig13547:2177..5996- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13547:2177..5996- >mRNA_H-paniculata_contig13547.2193.1 ID=mRNA_H-paniculata_contig13547.2193.1|Name=mRNA_H-paniculata_contig13547.2193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3360bp|location=Sequence derived from alignment at H-paniculata_contig13547:2177..5996- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |