mRNA_H-paniculata_contig13546.2192.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: D7FX31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.430e-53 Identity = 98/201 (48.76%), Postives = 132/201 (65.67%), Query Frame = 3 Query: 21 ELGALTPSLFVDADGTFSFWRYARSPAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATKTDYGVVHGGAMITAAGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLP-NCEEASQAGSDLRTVVLGVYFWFSVVVSVCSMEVWLHYTSRSS 620 E G + DA+G SF YAR+PAGR +HI P GLW++IAP QL+PSFR+K+RTAHRR+GR+FI +SVSMA G+ +++S A+ V G + T A YFL T +LA HAR K FA HR+W+LRHVA+GYA QRL+ A++ + + P E S G+ LR V G YF S+V+ V ME+WL +T+ +S Sbjct: 46 EQGFFRSTPLYDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRTAHRRLGRLFIFMSVSMALGVVPIVLSGASLIRRSVAVDGGLFTLAAYFLATGVLAATHARSKRFADHRIWILRHVAMGYAAHVQRLLAALSWWAIPLVAPAKYTELSPEGALLRGDVFGGYFLVSIVLCVGLMEMWLRHTTTAS 246
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: D7FX30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI) HSP 1 Score: 184 bits (467), Expect = 5.350e-52 Identity = 95/192 (49.48%), Postives = 131/192 (68.23%), Query Frame = 3 Query: 42 SLFVDADGTFSFWRYARSPAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATKTDYGVVHGGAMITAAGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLPNCEEASQAGSDLRTVVLGVYFWFSVVVSVCSMEVWLHYTSRS 617 S +DA+G S YAR+PAGR++HI P GLW++IAP QLSPSFR+K+RTAHRR+GR+FI +SVS++ G+ L++S A T +G + AGYFLVT LLA+ HAR K FA HR+W+LRHVA+GY+V QRL+ +T + +P + + G +LR V YF+ + ++V MEVWL +TS S Sbjct: 84 SPLIDAEGKPSILAYARTPAGRVMHILPAGLWSVIAPLQLSPSFRAKHRTAHRRLGRLFIFMSVSISLGLVPLVLSGAPTTPNWS-NGRESLVFAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWMFPLLMPGYTDFTNGGKELRANVFISYFFVGLALTVGPMEVWLRHTSPS 274
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A6H5J9S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE) HSP 1 Score: 182 bits (461), Expect = 1.050e-51 Identity = 98/201 (48.76%), Postives = 132/201 (65.67%), Query Frame = 3 Query: 21 ELGALTPSLFVDADGTFSFWRYARSPAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRA-TKTDYGVVHGG-AMITAAGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLPNCEEASQAGSDLRTVVLGVYFWFSVVVSVCSMEVWLHYTSRS 617 E G + DA+G SF YAR+PAGR +HI P GLW++IAP QL+PSFR+K+R AHRR+GR+FI +SVS++ G+ L++ A T T G GG + AGYFLVT LLA+ HAR K FA HR+W+LRHVA+GY+V QRL+ +T + +P + + G +LR V +YF VV++V MEVWL +T S Sbjct: 76 EQGFYRSTPLFDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRAAHRRLGRLFIFMSVSISLGLVPLVLGVAPTTTATGDSRGGRGALLFAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWIFPLLMPGYTDLTNDGMELRARVFALYFVAGVVLTVGPMEVWLRHTLPS 276
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A6H5JCE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE1_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.930e-24 Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 111 LHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIIS-----RATKTDYG----VVH---GGAMITAAGYFLVTALLAIRHARKKNFALHR 395 +HI P GLW++IAP QLSPSFR+K+RTAHRR+GR+FI +SVS+A G+ L++S A+KT G +V G + +GYFLVT LLA+ HAR K FA HR Sbjct: 1 MHILPAGLWSVIAPQQLSPSFRAKHRTAHRRLGRLFILMSVSIALGLVPLVLSVAPTTPASKTTLGPSALIVDWSDGRESLVFSGYFLVTGLLAVHHARNKGFADHR 107
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A7V9K2E7_9BACT (DUF2306 domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7V9K2E7_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 1.410e-15 Identity = 52/180 (28.89%), Postives = 92/180 (51.11%), Query Frame = 3 Query: 78 WRYARSPAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATKTDYGVVHGGAMITAAGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLPNCEEASQAGSDLR-TVVLGVYFWFSVVVSVCSMEVWLHYTSR 614 ++YAR P L HI P L+ + FQ + +FR+K+ H+R+G+ ++ L + GI LI+ + G+V A+ +FL + + A +A+KKNF +HR W++R ++G AVA R I+ + + +D+ ++ G FW + + + E W+HYT + Sbjct: 52 YKYARYPIMTLAHIIPGALFILAGVFQFNRTFRNKHPGVHKRIGKFYLLLGCII--GITALIMGITFQFG-GIVETIAVTLFGLFFLYSLIKAYYYAKKKNFMMHREWMIRGYSLGLAVATMRPIIGLFFAL---------------TDIAFSIFFGYVFWLAFIPHILVAEWWIHYTRK 213
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A1M7J9E8_9SPHI (Predicted membrane protein n=1 Tax=Mucilaginibacter sp. OK098 TaxID=1855297 RepID=A0A1M7J9E8_9SPHI) HSP 1 Score: 81.3 bits (199), Expect = 2.110e-14 Identity = 51/174 (29.31%), Postives = 82/174 (47.13%), Query Frame = 3 Query: 96 PAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATKTDYGVVHGGAMITAAGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLPNCEEASQAGSDLRTVVLGVYFWFSVVVSVCSMEVWLHYTSRS 617 P +HI P L+ I+AP Q P R Y HR GRV + L + GI L++S G A + A FL + + + H R++ ALHR W++R AIG+A+A R I+ + +F + + + G+ FW + + + EVW++YT ++ Sbjct: 58 PVLTFIHIIPGSLFMILAPLQFVPKIRLNYLWFHRLSGRVLVVLG--LIIGITALVMSFKMAIG-GANESVATVVFASIFLFSLIKSFYHIRRREVALHREWMIRMFAIGFAIATVRPIVGMFFAF----------SHLSPHEF----FGIAFWLGFTIHLVAAEVWINYTRQN 214
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A316YF32_9BASI (Uncharacterized protein n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YF32_9BASI) HSP 1 Score: 73.6 bits (179), Expect = 3.030e-11 Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 111 LHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMA---FGIPCLIISRATKTDYGVVHG-----GAMITAAGY-FLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIM 455 LH+ P LW +APFQ + R+K R HR G VF +LS +A F + + S + + ++ G +T G F +LA+R A K+NF LHRLWV+ HV +G + +QR+ M Sbjct: 84 LHLLPGFLWLALAPFQFNYRLRNKQRALHRASGYVFFSLSALLALSGFTMIAVRFSYSHPDRWTLLFGLLPTFDVALTILGVLFAFPLVLALRGALKRNFDLHRLWVIVHVGVGLTIPYQRVFM 207
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A8J4BGR0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BGR0_9CHLO) HSP 1 Score: 73.6 bits (179), Expect = 3.030e-11 Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 3 Query: 81 RYARSPAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATKT--DYGVVHGGAMITA----------AGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQR 446 +YA+ PA +L H+ P+G+W+I QL P RS HR G+V S+ + G + S T G G I + +FL+TA +A+ HAR+ + HR W +RH+A G V QR Sbjct: 69 KYAQHPAVKLTHLLPSGVWSICGAIQLIPQIRSSVPRLHRISGQVMFLCSILIVIGYALMEASGLVTTLQPSGTTPPGPTIQMHLPHFTFRLLSAWFLLTAGVALAHARRGEYKAHRRWAVRHIASGAWVIVQR 202
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: A0A7S2K0V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0V7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.240e-11 Identity = 51/168 (30.36%), Postives = 75/168 (44.64%), Query Frame = 3 Query: 81 RYARSPAGRLLHIFPTGLWAIIAPFQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATK----TDYGVVHGGAMITA-------------------AGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLPNCEEASQA 515 +YA A +L HI P+ +W+ PFQL P R Y+ HR G F S+ + GI ++I R DY + I+ +F TA+ A+ R+KNFA H+ +V+RHVA G VA QR+++ I+F P + A Sbjct: 41 KYAGHAAVKLTHILPSTIWSASIPFQLHPKVRRTYKALHRLTGYAFFCTSLLLIIGI--VLIDRRKLYWHLADYPSIPNYEHISRFQFIQQSAQYLPEYSIYALTAWFTFTAIAALAFVRRKNFAQHQNYVIRHVASGIWVAVQRVLL-------IIFTPTLKSQIDA 199
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Match: UPI0007E8DB3E (DUF2306 domain-containing protein n=1 Tax=Pseudonocardia acaciae TaxID=551276 RepID=UPI0007E8DB3E) HSP 1 Score: 71.6 bits (174), Expect = 9.130e-11 Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 153 FQLSPSFRSKYRTAHRRMGRVFIALSVSMAFGIPCLIISRATKTDYGVVHGGAMITAAGYFLVTALLAIRHARKKNFALHRLWVLRHVAIGYAVAFQRLIMAVTLSFVIVFLPNCEEASQAGSDLRTV--VLGVYFWFSVVVSVCSMEVWL 599 FQ+ P FR+++R AHR +GR + L + GI L +S + T + G M+ A G+ LVT + R AR++ FA HR W+LR VA+ ++ R +A+ FVI+ P ++ GSD+ V G W S VV++ +E WL Sbjct: 86 FQVWPWFRTRFRAAHRWIGRAYFFLGIFPG-GIAVLGVSVVSTTGFVSSVGNTML-ALGW-LVTGVAGYRAARQRRFADHRAWMLRSVALTTSIVLNRPWVAL---FVIILDPG-SDSLLGGSDVAAVQAAAGSAVWMSWVVNLLVVEWWL 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13546.2192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13546.2192.1 >prot_H-paniculata_contig13546.2192.1 ID=prot_H-paniculata_contig13546.2192.1|Name=mRNA_H-paniculata_contig13546.2192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp MQELGALTPSLFVDADGTFSFWRYARSPAGRLLHIFPTGLWAIIAPFQLSback to top mRNA from alignment at H-paniculata_contig13546:712..3076- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13546.2192.1 ID=mRNA_H-paniculata_contig13546.2192.1|Name=mRNA_H-paniculata_contig13546.2192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2365bp|location=Sequence derived from alignment at H-paniculata_contig13546:712..3076- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13546:712..3076- >mRNA_H-paniculata_contig13546.2192.1 ID=mRNA_H-paniculata_contig13546.2192.1|Name=mRNA_H-paniculata_contig13546.2192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig13546:712..3076- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |