prot_H-paniculata_contig1353.2185.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1353.2185.1
Unique Nameprot_H-paniculata_contig1353.2185.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length352
Homology
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 2.910e-69
Identity = 166/324 (51.23%), Postives = 202/324 (62.35%), Query Frame = 0
Query:    4 ERWQQHAQAVAA----GXXXXXXXXXXXXXXXXXXXXDAKREQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDIRSFHPTMPSSQRAQMMGRSRAHDHQQPEGLIKITGAAPPEYLPAPV-----VEESEEDASTQEVGDEIIASPENVEIGAVSATVQEQEVEGVEDQA--------PEED---AEHGVSTVGAGAPTTPRATAALGLTGAMVVYGVGDIVEEDAGPRLRRGDEVLLRVSQENVTGKKKGVEISLLKTSKEKRKEEQLQKV 307
            ERWQ+HAQA++      XXXXXX                +REQG VC IKE+FGFVRC+DR GDLFFHLTEAP +IN+GDEVDF +G G RSGKD AL+L++LP GTV ++ +L+  F+GVIERDIRS   +MPS+ RA MMGRSR  + QQ EGLIKITGAAPPE  PA        E   + A   E GD           G  ++   E  V GV+D A        PE +   A        AG     RA A LGL GAMV Y V D +EEDAG R RRGDEV  +VSQE VTG+K+ VE+ L++T++EKR+ EQLQK+
Sbjct:  118 ERWQKHAQALSGRXXXXXXXXXXAQQRHGQQNQRPEAGGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSEGLIKITGAAPPEDPPAASDTTAPPEREVQPADATEGGD-----------GTDTSFETEAAVAGVDDAAGTSAPAATPETEEAVAVRSTQPAPAGDGKGDRA-APLGLQGAMVTYLVTDSLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVELVLVRTNREKREGEQLQKL 429          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.710e-67
Identity = 158/321 (49.22%), Postives = 195/321 (60.75%), Query Frame = 0
Query:    4 ERWQQHAQAVAA---GXXXXXXXXXXXXXXXXXXXXDAKREQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDIRSFHPTMPSSQRAQMMGRSRAHDHQQPEGLIKITGAAPPEYLPAPVV----EESEEDASTQEVGDEIIASPENVEIGAVSATVQEQEVEGVEDQAPEEDAEHGVSTVGAGAPTTPRATAA----------LGLTGAMVVYGVGDIVEEDAGPRLRRGDEVLLRVSQENVTGKKKGVEISLLKTSKEKRKEEQLQKV 307
            ERWQ+HAQA++     XXXX                  +REQG VC IKE+FGFVRC+DR GDLFFHLTEAP +IN+GDEVDF +G G RSGKD AL+L++LP GTV ++ +L+  F+GVIERDIRS+  +MPS+ RA MMGRSR  ++QQ EGLIKITGAAPPE   A       E   + A   E GD                T  E  V GV+D A               A  + + T A          LGL GAMV Y V D +EEDAG R RRGDEV  +VSQE VTG+K+ VE+ L++T++EKR+ EQLQK+
Sbjct:  120 ERWQKHAQALSGRSXXXXXXYNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSEGLIKITGAAPPEEPAADDTTAPPEGEVQPADATEGGDGTXXXXXXXXXXXSPET--EAAVAGVDDAAGTSAPAXXXXXXXXVAVRSTQPTLAGDDKGDTAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVEVVLVRTNREKREGEQLQKL 438          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A7S2SQY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.650e-19
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0
Query:   40 REQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDIRS 127
            RE G V  +KE FGF+RCV R GDLFFH++EAP+DI +GDEV+F V T  R G+  A  +  LP GTV+ + VLE  +VG+++R IR+
Sbjct:   26 RECGKVKSLKEKFGFIRCVGRPGDLFFHISEAPRDIEVGDEVEFAVDTS-RDGRLCAKAIDTLPRGTVQFEDVLETSYVGIVDRGIRN 112          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: K3WP78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP78_GLOUD)

HSP 1 Score: 99.4 bits (246), Expect = 4.950e-19
Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 0
Query:   41 EQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDIRSFHPTMPSSQRAQMMGRSRAHDHQQPEGLIKITGA 161
            E+G V  IKE+FGFV CVDR GDLFFH+TEAP D+ + DEV+F +    RS KD A QL  LP GT+  + + E  F G++ R +RS      SS  +      +    ++  GLI+I  A
Sbjct:  174 EKGIVVSIKESFGFVSCVDREGDLFFHITEAPVDVQLQDEVEFRIKYNQRSAKDIACQLVTLPKGTIVLEDISEEFFEGIVTRGVRS-----SSSYSSXXYDARQQQQREETHGLIEIAKA 289          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A5D6XH35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH35_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.150e-18
Identity = 94/275 (34.18%), Postives = 129/275 (46.91%), Query Frame = 0
Query:   40 REQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDIRS---FHPTMPSSQRAQMMGRSRAHDHQQPEGLIKITGAAPPEYLPAPVVEESEEDASTQE-VGDEIIASPENVEIGAVSATVQEQEVEGVEDQAPEEDAEHGVSTVGAGAPTTPRATAALGLTGAMVVYGVGDIVEEDAGPRLRR--------GDEVLLRVSQENVTGKKKGVEISLLKTSKEKRKEE 302
            +EQG V  IKE+FGFV C+DR GDLFFH+TEAP D+ + DEV+F V    RS ++ A QL  LP G++  + V +    GV+ R +RS   +H    S  R Q      A       GLI++        LP   V     DA+T+E V D   A   +   GA  +  +   V    D   +E      + VG    +   ATAA            GD   E   P+ RR        GDEV  RV+    TG K+ VE+S+  ++K K ++E
Sbjct:  148 KEQGVVIAIKESFGFVSCMDRDGDLFFHITEAPVDVQLHDEVEFRVKFNQRSSREMACQLVALPKGSIVQEDVADEFLDGVVTRALRSAPNYHNA--SDSRPQTQRDDAAF------GLIEVA------TLPDVAV-----DAATRESVADS--ADDSDSATGAAKSAARRNTVRFNADSVAQETTTAAAAAVGDAGDSDNAATAA------------GD---ESGRPKPRRKKAAVPHVGDEVRFRVATHRKTGVKRAVELSVTASAKAKLEKE 386          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A836CJ69_9STRA (CSD_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ69_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.660e-18
Identity = 79/255 (30.98%), Postives = 130/255 (50.98%), Query Frame = 0
Query:   58 VDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDIRSFHPTMPSSQRAQMMGRSRAHDHQQPE----GLIKITGAAPPEYLPAPVVEESEEDASTQEVGDEIIASPENVEIGAVSATVQEQEVEGVEDQAPEEDAEHGVSTVGAGAPTTPRATAALGLTGAMVVYGVGDIVEEDAGPRLRRGDEVLLRVSQENVTGKKKGVEISLLKTSKEKRKEEQLQKVR 308
            V+R GDLFFHL+EAP+D+ +GDE +FVVG   RS ++ A++L  L  GTVK + V+ G + G+++RDIR   P  PS+ +A+     RA D ++ E    GLI+IT A       AP  EE E +A   E  DE +   E +     S  +                                     + +  A  + G G++ +      L RGDEV ++++++ VTG+ K V   L+ +++ +R++E+L++++
Sbjct:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRV--PGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAV----AAAPAAEEKEGEA--MEGQDEEVVEQERIVNRMASFAL-------------------------------------VCVLPAPALDGSGEVDQ-----LLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLK 228          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP)

HSP 1 Score: 95.9 bits (237), Expect = 7.110e-18
Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   41 EQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDI-RSFHPTMPSSQRAQMMGRSRAHDHQQPEGLIKITGAAPPEYLPAPVVEESEEDASTQEVGDEIIASP 192
            +QG+V  IKENFGFV C++R GDLFFH++EAP D+ + DEV+F V    RS K+ A QL  LP GT+K + V + LF GV+ + + R  H       R     R      ++  GLI++  A  PE       EE+      ++  +E  ASP
Sbjct:  166 KQGFVVSIKENFGFVSCLERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSDELFDGVVTKSLPRGGH----GGGRGFFNNRDDDRHQREEHGLIEVKKA--PEQGEDAKAEETAATGDEEQTQEEADASP 312          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A329RLV6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RLV6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.160e-17
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0
Query:   37 DAKREQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDI 125
            D   EQG++  IKENFGFV C+ R GDLFFH++EAP D+ + DEV+F V    RS K+ A QL  LP GT+K + V E  + GV+ + +
Sbjct:  174 DMPMEQGFIVSIKENFGFVSCMGRDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSEEFYDGVVTKSL 262          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A3M6V819_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V819_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.630e-17
Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   41 EQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDI--------RSFHPTMPSSQRAQMMGRSRAHDHQQPEGLIKI 158
            EQG+V  IKENFGFV C++R GDLFFH++EAP  + + DEV+F V    RS K+ A QL  LP GT+K + V + L  G++ + +        R F+      +          H H++  GLI++
Sbjct:  204 EQGFVVSIKENFGFVSCMERDGDLFFHISEAPVGVQLQDEVEFRVSFNQRSDKEMACQLVALPKGTIKVEEVADELLDGIVTKSLPRGGHGNGRGFYNNRDDDR----------HQHREEYGLIEV 319          
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.410e-16
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 0
Query:   41 EQGYVCFIKENFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLHVLPTGTVKTDTVLEGLFVGVIERDI-RSFHPTMPSSQRAQMMGRSRAHDHQQPEGLIK 157
            E+G+V  IKENFGFV C++R GDLFFH+TEAP D+ + DEV+F V    RS K+ A QL  LP GT+  + V E  F GV+ + + R  + +  S  R      +R     +P GLI+
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVGLPKGTIVVEDVSEEFFDGVVTKSLPRGGNNSYNSYNRDD----TRHSQRDEPHGLIE 406          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1353.2185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE2.910e-6951.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP6_ECTSI1.710e-6749.22CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2SQY9_9STRA2.650e-1953.41Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K3WP78_GLOUD4.950e-1943.80Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XH35_9STRA1.150e-1834.18Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A836CJ69_9STRA2.660e-1830.98CSD_1 domain-containing protein n=1 Tax=Tribonema ... [more]
G4Z9V3_PHYSP7.110e-1839.22Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A329RLV6_9STRA4.160e-1749.44Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A3M6V819_9STRA7.630e-1738.89Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A662X4D1_9STRA1.410e-1644.07Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011129Cold shock domainSMARTSM00357csp_8coord: 42..102
e-value: 0.0014
score: 27.9
NoneNo IPR availableGENE3D2.40.50.140coord: 40..107
e-value: 5.6E-18
score: 66.7
NoneNo IPR availablePANTHERPTHR12913UNR PROTEIN N-RAS UPSTREAM GENE PROTEINcoord: 30..312
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 42..90
e-value: 7.7E-6
score: 25.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 38..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1353contigH-paniculata_contig1353:14782..19276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1353.2185.1mRNA_H-paniculata_contig1353.2185.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1353 14655..19294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1353.2185.1 ID=prot_H-paniculata_contig1353.2185.1|Name=mRNA_H-paniculata_contig1353.2185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MASERWQQHAQAVAAGRGGGGGFHQRHGRSQSQPDPDAKREQGYVCFIKE
NFGFVRCVDRTGDLFFHLTEAPQDINIGDEVDFVVGTGGRSGKDFALQLH
VLPTGTVKTDTVLEGLFVGVIERDIRSFHPTMPSSQRAQMMGRSRAHDHQ
QPEGLIKITGAAPPEYLPAPVVEESEEDASTQEVGDEIIASPENVEIGAV
SATVQEQEVEGVEDQAPEEDAEHGVSTVGAGAPTTPRATAALGLTGAMVV
YGVGDIVEEDAGPRLRRGDEVLLRVSQENVTGKKKGVEISLLKTSKEKRK
EEQLQKVRASYGEPWFRRSVTAPLIILPRGSQACSTHSIQTRSRICGRIC
Y*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011129CSD
IPR002059CSP_DNA-bd
IPR012340NA-bd_OB-fold